PMC:1359074 / 25660-25806
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11867 | 141-145 | NN | denotes | gene |
T11866 | 134-140 | NN | denotes | globin |
T11865 | 131-133 | JJ | denotes | ɛy |
T11864 | 127-130 | DT | denotes | the |
T11863 | 124-126 | IN | denotes | of |
T11862 | 111-123 | NN | denotes | upregulation |
T11861 | 100-110 | JJ | denotes | persistent |
T11860 | 98-99 | DT | denotes | a |
T11859 | 94-97 | CC | denotes | and |
T11858 | 92-93 | -COMMA- | denotes | , |
T11857 | 89-92 | NN | denotes | βH1 |
T11856 | 85-88 | CC | denotes | and |
T11855 | 83-84 | NN | denotes | ζ |
T11854 | 81-82 | -COMMA- | denotes | , |
T11853 | 76-81 | NN | denotes | genes |
T11852 | 69-75 | NN | denotes | globin |
T11851 | 59-68 | JJ | denotes | embryonic |
T11850 | 55-58 | DT | denotes | the |
T11849 | 52-54 | IN | denotes | on |
T11848 | 45-51 | NN | denotes | effect |
T11847 | 35-44 | JJ | denotes | transient |
T11846 | 33-34 | DT | denotes | a |
T11845 | 30-32 | VB | denotes | is |
T11844 | 24-29 | EX | denotes | there |
T11843 | 22-23 | -COMMA- | denotes | , |
T11842 | 17-22 | NN | denotes | mouse |
T11841 | 12-16 | JJ | denotes | null |
T11840 | 7-11 | NN | denotes | Sox6 |
T11839 | 3-6 | DT | denotes | the |
T11838 | 0-2 | IN | denotes | In |
R7710 | T11842 | T11838 | arg2Of | mouse,In |
R7711 | T11842 | T11839 | arg1Of | mouse,the |
R7712 | T11842 | T11840 | arg1Of | mouse,Sox6 |
R7713 | T11842 | T11841 | arg1Of | mouse,null |
R7714 | T11844 | T11845 | arg1Of | there,is |
R7715 | T11845 | T11838 | arg1Of | is,In |
R7716 | T11845 | T11843 | arg1Of | is,"," |
R7717 | T11848 | T11845 | arg2Of | effect,is |
R7718 | T11848 | T11846 | arg1Of | effect,a |
R7719 | T11848 | T11847 | arg1Of | effect,transient |
R7720 | T11848 | T11849 | arg1Of | effect,on |
R7721 | T11853 | T11850 | arg1Of | genes,the |
R7722 | T11853 | T11851 | arg1Of | genes,embryonic |
R7723 | T11853 | T11852 | arg1Of | genes,globin |
R7724 | T11853 | T11854 | arg1Of | genes,"," |
R7725 | T11853 | T11859 | arg1Of | genes,and |
R7726 | T11855 | T11856 | arg1Of | ζ,and |
R7727 | T11856 | T11854 | arg2Of | and,"," |
R7728 | T11857 | T11856 | arg2Of | βH1,and |
R7729 | T11859 | T11849 | arg2Of | and,on |
R7730 | T11859 | T11858 | arg1Of | and,"," |
R7731 | T11862 | T11859 | arg2Of | upregulation,and |
R7732 | T11862 | T11860 | arg1Of | upregulation,a |
R7733 | T11862 | T11861 | arg1Of | upregulation,persistent |
R7734 | T11862 | T11863 | arg1Of | upregulation,of |
R7735 | T11867 | T11863 | arg2Of | gene,of |
R7736 | T11867 | T11864 | arg1Of | gene,the |
R7737 | T11867 | T11865 | arg1Of | gene,ɛy |
R7738 | T11867 | T11866 | arg1Of | gene,globin |
bionlp-st-ge-2016-coref
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11445 | 89-92 | Antecedent | denotes | βH1 |
T11444 | 83-84 | Antecedent | denotes | ζ |
T11443 | 59-81 | Anaphor | denotes | embryonic globin genes |
R7667 | T11443 | T11444 | boundBy | embryonic globin genes,ζ |
R7668 | T11443 | T11445 | boundBy | embryonic globin genes,βH1 |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11465 | 131-140 | Protein | denotes | ɛy globin |
T11464 | 89-92 | Protein | denotes | βH1 |
T11463 | 83-84 | Protein | denotes | ζ |
T11462 | 7-11 | Protein | denotes | Sox6 |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13250 | 7-11 | http://www.uniprot.org/uniprot/P35712 | denotes | Sox6 |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11206 | 134-140 | http://purl.obolibrary.org/obo/GO_0005344 | denotes | globin |
T11205 | 69-75 | http://purl.obolibrary.org/obo/GO_0005344 | denotes | globin |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11556 | 134-140 | http://purl.obolibrary.org/obo/GO_0005344 | denotes | globin |
T11555 | 69-75 | http://purl.obolibrary.org/obo/GO_0005344 | denotes | globin |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11150 | 0-146 | Sentence | denotes | In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene. |
T199 | 0-146 | Sentence | denotes | In the Sox6 null mouse, there is a transient effect on the embryonic globin genes, ζ and βH1, and a persistent upregulation of the ɛy globin gene. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11729 | 131-140 | Protein | denotes | ɛy globin |
T11728 | 89-92 | Protein | denotes | βH1 |
T11727 | 83-84 | Protein | denotes | ζ |
T11726 | 7-11 | Protein | denotes | Sox6 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15790 | 111-123 | Positive_regulation | denotes | upregulation |
T15789 | 45-51 | Regulation | denotes | effect |
T15700 | 131-140 | Protein | denotes | ɛy globin |
T15699 | 89-92 | Protein | denotes | βH1 |
T15698 | 83-84 | Protein | denotes | ζ |
T15697 | 7-11 | Protein | denotes | Sox6 |
R10997 | T15698 | T15789 | themeOf | ζ,effect |
R10998 | T15699 | T15789 | themeOf | βH1,effect |
R10999 | T15700 | T15790 | themeOf | ɛy globin,upregulation |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13379 | 111-123 | Positive_regulation | denotes | upregulation |
T13290 | 131-140 | Protein | denotes | ɛy globin |
T13289 | 89-92 | Protein | denotes | βH1 |
T13288 | 83-84 | Protein | denotes | ζ |
T13287 | 7-11 | Protein | denotes | Sox6 |
R9161 | T13290 | T13379 | themeOf | ɛy globin,upregulation |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13627 | 111-123 | Positive_regulation | denotes | upregulation |
T13626 | 45-51 | Regulation | denotes | effect |
T13625 | 12-16 | Negative_regulation | denotes | null |
T13536 | 131-140 | Protein | denotes | ɛy globin |
T13535 | 89-92 | Protein | denotes | βH1 |
T13534 | 83-84 | Protein | denotes | ζ |
T13533 | 7-11 | Protein | denotes | Sox6 |
R9241 | T13533 | T13625 | themeOf | Sox6,null |
R9248 | T13534 | T13626 | themeOf | ζ,effect |
R9249 | T13535 | T13626 | themeOf | βH1,effect |
R9254 | T13536 | T13627 | themeOf | ɛy globin,upregulation |
R9311 | T13627 | T13626 | themeOf | upregulation,effect |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T15695 | 98-145 | Positive_regulation | denotes | a persistent upregulation of the ɛy globin gene |
T15601 | 124-145 | Protein | denotes | of the ɛy globin gene |
T15575 | 7-11 | Protein | denotes | Sox6 |
T15550 | 55-81 | Protein | denotes | the embryonic globin genes |
T15522 | 83-84 | Protein | denotes | ζ |
T15492 | 55-81 | Protein | denotes | the embryonic globin genes |
T15490 | 89-93 | Protein | denotes | βH1, |
T15457 | 134-140 | Protein | denotes | globin |
T15439 | 59-68 | Protein | denotes | embryonic |
T15664 | 124-145 | Protein | denotes | of the ɛy globin gene |
R10989 | T15601 | T15695 | themeOf | of the ɛy globin gene,a persistent upregulation of the ɛy globin gene |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T13854 | 145-146 | . | denotes | . |
T13853 | 141-145 | NN | denotes | gene |
T13852 | 134-140 | NN | denotes | globin |
T13851 | 131-133 | JJ | denotes | ɛy |
T13850 | 127-130 | DT | denotes | the |
T13849 | 124-126 | IN | denotes | of |
T13848 | 111-123 | NN | denotes | upregulation |
T13847 | 100-110 | JJ | denotes | persistent |
T13846 | 98-99 | DT | denotes | a |
T13845 | 94-97 | CC | denotes | and |
T13844 | 92-93 | , | denotes | , |
T13843 | 89-92 | NNP | denotes | βH1 |
T13842 | 85-88 | CC | denotes | and |
T13841 | 83-84 | NN | denotes | ζ |
T13840 | 81-82 | , | denotes | , |
T13839 | 76-81 | NNS | denotes | genes |
T13838 | 69-75 | NN | denotes | globin |
T13837 | 59-68 | JJ | denotes | embryonic |
T13836 | 55-58 | DT | denotes | the |
T13835 | 52-54 | IN | denotes | on |
T13834 | 45-51 | NN | denotes | effect |
T13833 | 35-44 | JJ | denotes | transient |
T13832 | 33-34 | DT | denotes | a |
T13831 | 30-32 | VBZ | denotes | is |
T13830 | 24-29 | EX | denotes | there |
T13829 | 22-23 | , | denotes | , |
T13828 | 17-22 | NN | denotes | mouse |
T13827 | 12-16 | NN | denotes | null |
T13826 | 7-11 | NNP | denotes | Sox6 |
T13825 | 3-6 | DT | denotes | the |
T13824 | 0-2 | IN | denotes | In |
R9425 | T13824 | T13831 | prep | In,is |
R9426 | T13825 | T13828 | det | the,mouse |
R9428 | T13826 | T13828 | compound | Sox6,mouse |
R9429 | T13827 | T13828 | amod | null,mouse |
R9430 | T13828 | T13824 | pobj | mouse,In |
R9431 | T13829 | T13831 | punct | ",",is |
R9433 | T13830 | T13831 | expl | there,is |
R9434 | T13831 | T13831 | ROOT | is,is |
R9436 | T13832 | T13834 | det | a,effect |
R9438 | T13833 | T13834 | amod | transient,effect |
R9439 | T13834 | T13831 | attr | effect,is |
R9441 | T13846 | T13848 | det | a,upregulation |
R9442 | T13835 | T13834 | prep | on,effect |
R9443 | T13836 | T13839 | det | the,genes |
R9444 | T13837 | T13839 | amod | embryonic,genes |
R9445 | T13838 | T13839 | compound | globin,genes |
R9446 | T13839 | T13835 | pobj | genes,on |
R9447 | T13840 | T13839 | punct | ",",genes |
R9448 | T13841 | T13839 | conj | ζ,genes |
R9449 | T13842 | T13841 | cc | and,ζ |
R9450 | T13843 | T13841 | conj | βH1,ζ |
R9451 | T13844 | T13843 | punct | ",",βH1 |
R9452 | T13845 | T13843 | cc | and,βH1 |
R9453 | T13847 | T13848 | amod | persistent,upregulation |
R9454 | T13848 | T13843 | conj | upregulation,βH1 |
R9455 | T13849 | T13848 | prep | of,upregulation |
R9456 | T13850 | T13853 | det | the,gene |
R9458 | T13851 | T13853 | amod | ɛy,gene |
R9461 | T13852 | T13853 | compound | globin,gene |
R9465 | T13853 | T13849 | pobj | gene,of |
R9468 | T13854 | T13831 | punct | .,is |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11607 | 45-51 | Regulation | denotes | effect |
T11606 | 111-123 | Positive_regulation | denotes | upregulation |
T11605 | 131-145 | Protein | denotes | ɛy globin gene |
T11604 | 69-81 | Protein | denotes | globin genes |
T11603 | 7-11 | Protein | denotes | Sox6 |
R7680 | T11604 | T11607 | causeOf | globin genes,effect |
R7681 | T11605 | T11606 | themeOf | ɛy globin gene,upregulation |
R7682 | T11606 | T11607 | themeOf | upregulation,effect |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10782 | 131-140 | Protein | denotes | ɛy globin |
T10781 | 89-92 | Protein | denotes | βH1 |
T10780 | 83-84 | Protein | denotes | ζ |
T10779 | 7-11 | Protein | denotes | Sox6 |
T10872 | 111-123 | Positive_regulation | denotes | upregulation |
T10871 | 45-51 | Regulation | denotes | effect |
R7434 | T10782 | T10872 | themeOf | ɛy globin,upregulation |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11021 | 131-140 | Protein | denotes | ɛy globin |
T11020 | 111-123 | Positive_regulation | denotes | upregulation |
T11019 | 89-92 | Protein | denotes | βH1 |
T11018 | 83-84 | Protein | denotes | ζ |
T11017 | 7-11 | Protein | denotes | Sox6 |
T10927 | 131-140 | Protein | denotes | ɛy globin |
T10926 | 89-92 | Protein | denotes | βH1 |
T10925 | 83-84 | Protein | denotes | ζ |
T10924 | 7-11 | Protein | denotes | Sox6 |
R7492 | T11021 | T11020 | themeOf | ɛy globin,upregulation |