PMC:1359074 / 227-445
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T316 | 216-218 | IN | denotes | In |
| T315 | 208-214 | NN | denotes | muscle |
| T314 | 204-207 | CC | denotes | and |
| T313 | 202-203 | -COMMA- | denotes | , |
| T312 | 193-202 | NN | denotes | cartilage |
| T311 | 191-192 | -COMMA- | denotes | , |
| T310 | 185-191 | NN | denotes | system |
| T309 | 177-184 | JJ | denotes | nervous |
| T308 | 169-176 | JJ | denotes | central |
| T307 | 165-168 | DT | denotes | the |
| T306 | 162-164 | IN | denotes | of |
| T305 | 150-161 | NN | denotes | development |
| T304 | 146-149 | DT | denotes | the |
| T303 | 143-145 | IN | denotes | in |
| T302 | 138-142 | NN | denotes | role |
| T301 | 136-137 | DT | denotes | a |
| T300 | 130-135 | VB | denotes | plays |
| T299 | 125-129 | NN | denotes | Sox6 |
| T298 | 120-124 | IN | denotes | that |
| T297 | 110-119 | VB | denotes | suggested |
| T296 | 105-109 | VB | denotes | have |
| T295 | 97-104 | NN | denotes | studies |
| T294 | 88-96 | NNP | denotes | Previous |
| T293 | 83-87 | NNP | denotes | Sry. |
| T292 | 81-82 | -COMMA- | denotes | , |
| T291 | 77-81 | NN | denotes | gene |
| T290 | 65-76 | VB | denotes | determining |
| T289 | 58-64 | NN | denotes | testis |
| T288 | 54-57 | DT | denotes | the |
| T287 | 51-53 | IN | denotes | in |
| T286 | 41-50 | VB | denotes | described |
| T285 | 35-40 | RB | denotes | first |
| T284 | 33-34 | -COMMA- | denotes | , |
| T283 | 27-33 | NN | denotes | domain |
| T282 | 19-26 | NN | denotes | binding |
| T281 | 15-18 | NN | denotes | DNA |
| T280 | 13-14 | -RRB- | denotes | ) |
| T279 | 10-13 | NN | denotes | HMG |
| T278 | 9-10 | -LRB- | denotes | ( |
| T277 | 3-8 | NN | denotes | group |
| R63 | T279 | T278 | arg2Of | HMG,( |
| R64 | T280 | T278 | arg3Of | ),( |
| R71 | T283 | T277 | arg1Of | domain,group |
| R72 | T283 | T278 | arg1Of | domain,( |
| R73 | T283 | T281 | arg1Of | domain,DNA |
| R74 | T283 | T282 | arg1Of | domain,binding |
| R75 | T283 | T284 | arg1Of | domain,"," |
| R76 | T283 | T286 | arg2Of | domain,described |
| R77 | T286 | T285 | arg1Of | described,first |
| R78 | T286 | T287 | arg1Of | described,in |
| R79 | T289 | T287 | arg2Of | testis,in |
| R80 | T289 | T288 | arg1Of | testis,the |
| R81 | T289 | T290 | arg1Of | testis,determining |
| R82 | T291 | T290 | arg2Of | gene,determining |
| R83 | T291 | T296 | modOf | gene,have |
| R84 | T294 | T293 | arg1Of | Previous,Sry. |
| R85 | T295 | T294 | arg1Of | studies,Previous |
| R86 | T295 | T296 | arg1Of | studies,have |
| R87 | T295 | T297 | arg1Of | studies,suggested |
| R88 | T297 | T292 | arg1Of | suggested,"," |
| R89 | T297 | T296 | arg2Of | suggested,have |
| R90 | T299 | T300 | arg1Of | Sox6,plays |
| R91 | T300 | T297 | arg2Of | plays,suggested |
| R92 | T300 | T298 | arg1Of | plays,that |
| R93 | T300 | T303 | arg1Of | plays,in |
| R94 | T302 | T300 | arg2Of | role,plays |
| R95 | T302 | T301 | arg1Of | role,a |
| R96 | T305 | T306 | arg1Of | development,of |
| R97 | T305 | T311 | arg1Of | development,"," |
| R98 | T310 | T306 | arg2Of | system,of |
| R99 | T310 | T307 | arg1Of | system,the |
| R100 | T310 | T308 | arg1Of | system,central |
| R101 | T310 | T309 | arg1Of | system,nervous |
| R102 | T311 | T314 | arg1Of | ",",and |
| R103 | T312 | T311 | arg2Of | cartilage,"," |
| R104 | T314 | T303 | arg2Of | and,in |
| R105 | T314 | T304 | arg1Of | and,the |
| R106 | T314 | T313 | arg1Of | and,"," |
| R107 | T315 | T314 | arg2Of | muscle,and |
bionlp-st-ge-2016-test-proteins
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T149 | 83-86 | Protein | denotes | Sry |
| T150 | 125-129 | Protein | denotes | Sox6 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T475 | 125-129 | http://www.uniprot.org/uniprot/P35712 | denotes | Sox6 |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T86 | 58-64 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testis |
| T87 | 169-176 | http://purl.obolibrary.org/obo/UBERON_0012131 | denotes | central |
| T88 | 169-191 | http://purl.obolibrary.org/obo/UBERON_0001017 | denotes | central nervous system |
| T89 | 177-191 | http://purl.obolibrary.org/obo/UBERON_0001016 | denotes | nervous system |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T112 | 150-191 | http://purl.obolibrary.org/obo/GO_0007417 | denotes | development of the central nervous system |
| T111 | 150-161 | http://purl.obolibrary.org/obo/GO_0032502 | denotes | development |
| T113 | 150-191 | http://purl.obolibrary.org/obo/GO_0021954 | denotes | development of the central nervous system |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T169 | 15-26 | http://purl.obolibrary.org/obo/GO_0003677 | denotes | DNA binding |
| T170 | 15-33 | http://purl.obolibrary.org/obo/GO_0050692 | denotes | DNA binding domain |
| T171 | 19-26 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 88-215 | Sentence | denotes | Previous studies have suggested that Sox6 plays a role in the development of the central nervous system, cartilage, and muscle. |
ICD10
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T173 | 177-184 | http://purl.bioontology.org/ontology/ICD10/R45.0 | denotes | nervous |
simple1
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T235 | 125-129 | Protein | denotes | Sox6 |
| T234 | 83-86 | Protein | denotes | Sry |
BioNLP16_DUT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T879 | 83-86 | Protein | denotes | Sry |
| T880 | 125-129 | Protein | denotes | Sox6 |
BioNLP16_Messiy
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T487 | 83-86 | Protein | denotes | Sry |
| T488 | 125-129 | Protein | denotes | Sox6 |
DLUT931
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T518 | 83-86 | Protein | denotes | Sry |
| T519 | 125-129 | Protein | denotes | Sox6 |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T875 | 54-86 | Localization | denotes | the testis determining gene, Sry |
| T846 | 54-86 | Protein | denotes | the testis determining gene, Sry |
| T856 | 125-129 | Protein | denotes | Sox6 |
| T864 | 54-86 | Protein | denotes | the testis determining gene, Sry |
| T865 | 15-86 | Entity | denotes | DNA binding domain, first described in the testis determining gene, Sry |
| R576 | T846 | T875 | themeOf | "the testis determining gene, Sry","the testis determining gene, Sry" |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T641 | 216-218 | IN | denotes | In |
| T640 | 214-215 | . | denotes | . |
| T639 | 208-214 | NN | denotes | muscle |
| T638 | 204-207 | CC | denotes | and |
| T637 | 202-203 | , | denotes | , |
| T636 | 193-202 | NN | denotes | cartilage |
| T635 | 191-192 | , | denotes | , |
| T634 | 185-191 | NN | denotes | system |
| T633 | 177-184 | JJ | denotes | nervous |
| T632 | 169-176 | JJ | denotes | central |
| T631 | 165-168 | DT | denotes | the |
| T630 | 162-164 | IN | denotes | of |
| T629 | 150-161 | NN | denotes | development |
| T628 | 146-149 | DT | denotes | the |
| T627 | 143-145 | IN | denotes | in |
| T626 | 138-142 | NN | denotes | role |
| T625 | 136-137 | DT | denotes | a |
| T624 | 130-135 | NNS | denotes | plays |
| T623 | 125-129 | JJ | denotes | Sox6 |
| T622 | 120-124 | IN | denotes | that |
| T621 | 110-119 | VBN | denotes | suggested |
| T620 | 105-109 | VBP | denotes | have |
| T619 | 97-104 | NNS | denotes | studies |
| T618 | 88-96 | JJ | denotes | Previous |
| T617 | 86-87 | . | denotes | . |
| T616 | 83-86 | NNP | denotes | Sry |
| T615 | 81-82 | , | denotes | , |
| T614 | 77-81 | NN | denotes | gene |
| T613 | 65-76 | VBG | denotes | determining |
| T612 | 58-64 | NN | denotes | testis |
| T611 | 54-57 | DT | denotes | the |
| T610 | 51-53 | IN | denotes | in |
| T609 | 41-50 | VBN | denotes | described |
| T608 | 35-40 | JJ | denotes | first |
| T607 | 33-34 | , | denotes | , |
| T606 | 27-33 | NN | denotes | domain |
| T605 | 19-26 | JJ | denotes | binding |
| T604 | 15-18 | NNP | denotes | DNA |
| T603 | 13-14 | -RRB- | denotes | ) |
| T602 | 10-13 | NNP | denotes | HMG |
| T601 | 9-10 | -LRB- | denotes | ( |
| T600 | 3-8 | NN | denotes | group |
| R297 | T601 | T602 | punct | (,HMG |
| R298 | T602 | T600 | appos | HMG,group |
| R299 | T603 | T602 | punct | ),HMG |
| R300 | T604 | T606 | compound | DNA,domain |
| R301 | T605 | T606 | amod | binding,domain |
| R302 | T606 | T600 | conj | domain,group |
| R303 | T607 | T606 | punct | ",",domain |
| R304 | T608 | T609 | advmod | first,described |
| R305 | T609 | T600 | acl | described,group |
| R306 | T610 | T609 | prep | in,described |
| R307 | T611 | T614 | det | the,gene |
| R308 | T612 | T614 | amod | testis,gene |
| R309 | T613 | T614 | amod | determining,gene |
| R310 | T614 | T610 | pobj | gene,in |
| R311 | T615 | T614 | punct | ",",gene |
| R312 | T616 | T614 | appos | Sry,gene |
| R314 | T618 | T619 | amod | Previous,studies |
| R315 | T619 | T621 | nsubj | studies,suggested |
| R316 | T620 | T621 | aux | have,suggested |
| R317 | T621 | T621 | ROOT | suggested,suggested |
| R318 | T622 | T624 | mark | that,plays |
| R319 | T623 | T624 | nsubj | Sox6,plays |
| R320 | T624 | T621 | ccomp | plays,suggested |
| R321 | T625 | T626 | det | a,role |
| R322 | T626 | T624 | dobj | role,plays |
| R323 | T627 | T626 | prep | in,role |
| R324 | T628 | T629 | det | the,development |
| R325 | T629 | T627 | pobj | development,in |
| R326 | T630 | T629 | prep | of,development |
| R327 | T631 | T634 | det | the,system |
| R328 | T632 | T634 | amod | central,system |
| R329 | T633 | T634 | amod | nervous,system |
| R330 | T634 | T630 | pobj | system,of |
| R331 | T635 | T634 | punct | ",",system |
| R332 | T636 | T634 | conj | cartilage,system |
| R333 | T637 | T636 | punct | ",",cartilage |
| R334 | T638 | T636 | cc | and,cartilage |
| R335 | T639 | T636 | conj | muscle,cartilage |
| R336 | T640 | T621 | punct | .,suggested |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T208 | 125-129 | Protein | denotes | Sox6 |
| T205 | 27-33 | Entity | denotes | domain |
| T204 | 83-86 | Protein | denotes | Sry |
| R30 | T204 | T205 | partOf | Sry,domain |
testone
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T23 | 83-86 | Protein | denotes | Sry |
| T24 | 125-129 | Protein | denotes | Sox6 |
test3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T48 | 83-86 | Protein | denotes | Sry |
| T49 | 125-129 | Protein | denotes | Sox6 |
| T68 | 83-86 | Protein | denotes | Sry |
| T69 | 125-129 | Protein | denotes | Sox6 |