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PMC:1359074 / 227-445 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T316 216-218 IN denotes In
T315 208-214 NN denotes muscle
T314 204-207 CC denotes and
T313 202-203 -COMMA- denotes ,
T312 193-202 NN denotes cartilage
T311 191-192 -COMMA- denotes ,
T310 185-191 NN denotes system
T309 177-184 JJ denotes nervous
T308 169-176 JJ denotes central
T307 165-168 DT denotes the
T306 162-164 IN denotes of
T305 150-161 NN denotes development
T304 146-149 DT denotes the
T303 143-145 IN denotes in
T302 138-142 NN denotes role
T301 136-137 DT denotes a
T300 130-135 VB denotes plays
T299 125-129 NN denotes Sox6
T298 120-124 IN denotes that
T297 110-119 VB denotes suggested
T296 105-109 VB denotes have
T295 97-104 NN denotes studies
T294 88-96 NNP denotes Previous
T293 83-87 NNP denotes Sry.
T292 81-82 -COMMA- denotes ,
T291 77-81 NN denotes gene
T290 65-76 VB denotes determining
T289 58-64 NN denotes testis
T288 54-57 DT denotes the
T287 51-53 IN denotes in
T286 41-50 VB denotes described
T285 35-40 RB denotes first
T284 33-34 -COMMA- denotes ,
T283 27-33 NN denotes domain
T282 19-26 NN denotes binding
T281 15-18 NN denotes DNA
T280 13-14 -RRB- denotes )
T279 10-13 NN denotes HMG
T278 9-10 -LRB- denotes (
T277 3-8 NN denotes group
R63 T279 T278 arg2Of HMG,(
R64 T280 T278 arg3Of ),(
R71 T283 T277 arg1Of domain,group
R72 T283 T278 arg1Of domain,(
R73 T283 T281 arg1Of domain,DNA
R74 T283 T282 arg1Of domain,binding
R75 T283 T284 arg1Of domain,","
R76 T283 T286 arg2Of domain,described
R77 T286 T285 arg1Of described,first
R78 T286 T287 arg1Of described,in
R79 T289 T287 arg2Of testis,in
R80 T289 T288 arg1Of testis,the
R81 T289 T290 arg1Of testis,determining
R82 T291 T290 arg2Of gene,determining
R83 T291 T296 modOf gene,have
R84 T294 T293 arg1Of Previous,Sry.
R85 T295 T294 arg1Of studies,Previous
R86 T295 T296 arg1Of studies,have
R87 T295 T297 arg1Of studies,suggested
R88 T297 T292 arg1Of suggested,","
R89 T297 T296 arg2Of suggested,have
R90 T299 T300 arg1Of Sox6,plays
R91 T300 T297 arg2Of plays,suggested
R92 T300 T298 arg1Of plays,that
R93 T300 T303 arg1Of plays,in
R94 T302 T300 arg2Of role,plays
R95 T302 T301 arg1Of role,a
R96 T305 T306 arg1Of development,of
R97 T305 T311 arg1Of development,","
R98 T310 T306 arg2Of system,of
R99 T310 T307 arg1Of system,the
R100 T310 T308 arg1Of system,central
R101 T310 T309 arg1Of system,nervous
R102 T311 T314 arg1Of ",",and
R103 T312 T311 arg2Of cartilage,","
R104 T314 T303 arg2Of and,in
R105 T314 T304 arg1Of and,the
R106 T314 T313 arg1Of and,","
R107 T315 T314 arg2Of muscle,and

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T149 83-86 Protein denotes Sry
T150 125-129 Protein denotes Sox6

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T475 125-129 http://www.uniprot.org/uniprot/P35712 denotes Sox6

UBERON-AE

Id Subject Object Predicate Lexical cue
T86 58-64 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testis
T87 169-176 http://purl.obolibrary.org/obo/UBERON_0012131 denotes central
T88 169-191 http://purl.obolibrary.org/obo/UBERON_0001017 denotes central nervous system
T89 177-191 http://purl.obolibrary.org/obo/UBERON_0001016 denotes nervous system

GO-BP

Id Subject Object Predicate Lexical cue
T112 150-191 http://purl.obolibrary.org/obo/GO_0007417 denotes development of the central nervous system
T111 150-161 http://purl.obolibrary.org/obo/GO_0032502 denotes development
T113 150-191 http://purl.obolibrary.org/obo/GO_0021954 denotes development of the central nervous system

GO-MF

Id Subject Object Predicate Lexical cue
T169 15-26 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA binding
T170 15-33 http://purl.obolibrary.org/obo/GO_0050692 denotes DNA binding domain
T171 19-26 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T5 88-215 Sentence denotes Previous studies have suggested that Sox6 plays a role in the development of the central nervous system, cartilage, and muscle.

ICD10

Id Subject Object Predicate Lexical cue
T173 177-184 http://purl.bioontology.org/ontology/ICD10/R45.0 denotes nervous

simple1

Id Subject Object Predicate Lexical cue
T235 125-129 Protein denotes Sox6
T234 83-86 Protein denotes Sry

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T879 83-86 Protein denotes Sry
T880 125-129 Protein denotes Sox6

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T487 83-86 Protein denotes Sry
T488 125-129 Protein denotes Sox6

DLUT931

Id Subject Object Predicate Lexical cue
T518 83-86 Protein denotes Sry
T519 125-129 Protein denotes Sox6

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T875 54-86 Localization denotes the testis determining gene, Sry
T846 54-86 Protein denotes the testis determining gene, Sry
T856 125-129 Protein denotes Sox6
T864 54-86 Protein denotes the testis determining gene, Sry
T865 15-86 Entity denotes DNA binding domain, first described in the testis determining gene, Sry
R576 T846 T875 themeOf "the testis determining gene, Sry","the testis determining gene, Sry"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T641 216-218 IN denotes In
T640 214-215 . denotes .
T639 208-214 NN denotes muscle
T638 204-207 CC denotes and
T637 202-203 , denotes ,
T636 193-202 NN denotes cartilage
T635 191-192 , denotes ,
T634 185-191 NN denotes system
T633 177-184 JJ denotes nervous
T632 169-176 JJ denotes central
T631 165-168 DT denotes the
T630 162-164 IN denotes of
T629 150-161 NN denotes development
T628 146-149 DT denotes the
T627 143-145 IN denotes in
T626 138-142 NN denotes role
T625 136-137 DT denotes a
T624 130-135 NNS denotes plays
T623 125-129 JJ denotes Sox6
T622 120-124 IN denotes that
T621 110-119 VBN denotes suggested
T620 105-109 VBP denotes have
T619 97-104 NNS denotes studies
T618 88-96 JJ denotes Previous
T617 86-87 . denotes .
T616 83-86 NNP denotes Sry
T615 81-82 , denotes ,
T614 77-81 NN denotes gene
T613 65-76 VBG denotes determining
T612 58-64 NN denotes testis
T611 54-57 DT denotes the
T610 51-53 IN denotes in
T609 41-50 VBN denotes described
T608 35-40 JJ denotes first
T607 33-34 , denotes ,
T606 27-33 NN denotes domain
T605 19-26 JJ denotes binding
T604 15-18 NNP denotes DNA
T603 13-14 -RRB- denotes )
T602 10-13 NNP denotes HMG
T601 9-10 -LRB- denotes (
T600 3-8 NN denotes group
R297 T601 T602 punct (,HMG
R298 T602 T600 appos HMG,group
R299 T603 T602 punct ),HMG
R300 T604 T606 compound DNA,domain
R301 T605 T606 amod binding,domain
R302 T606 T600 conj domain,group
R303 T607 T606 punct ",",domain
R304 T608 T609 advmod first,described
R305 T609 T600 acl described,group
R306 T610 T609 prep in,described
R307 T611 T614 det the,gene
R308 T612 T614 amod testis,gene
R309 T613 T614 amod determining,gene
R310 T614 T610 pobj gene,in
R311 T615 T614 punct ",",gene
R312 T616 T614 appos Sry,gene
R314 T618 T619 amod Previous,studies
R315 T619 T621 nsubj studies,suggested
R316 T620 T621 aux have,suggested
R317 T621 T621 ROOT suggested,suggested
R318 T622 T624 mark that,plays
R319 T623 T624 nsubj Sox6,plays
R320 T624 T621 ccomp plays,suggested
R321 T625 T626 det a,role
R322 T626 T624 dobj role,plays
R323 T627 T626 prep in,role
R324 T628 T629 det the,development
R325 T629 T627 pobj development,in
R326 T630 T629 prep of,development
R327 T631 T634 det the,system
R328 T632 T634 amod central,system
R329 T633 T634 amod nervous,system
R330 T634 T630 pobj system,of
R331 T635 T634 punct ",",system
R332 T636 T634 conj cartilage,system
R333 T637 T636 punct ",",cartilage
R334 T638 T636 cc and,cartilage
R335 T639 T636 conj muscle,cartilage
R336 T640 T621 punct .,suggested

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T208 125-129 Protein denotes Sox6
T205 27-33 Entity denotes domain
T204 83-86 Protein denotes Sry
R30 T204 T205 partOf Sry,domain

testone

Id Subject Object Predicate Lexical cue
T23 83-86 Protein denotes Sry
T24 125-129 Protein denotes Sox6

test3

Id Subject Object Predicate Lexical cue
T48 83-86 Protein denotes Sry
T49 125-129 Protein denotes Sox6
T68 83-86 Protein denotes Sry
T69 125-129 Protein denotes Sox6