PMC:1359074 / 18529-18638 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/1359074","sourcedb":"PMC","sourceid":"1359074","source_url":"http://www.ncbi.nlm.nih.gov/pmc/1359074","text":"Ablation of putative Sox/Sox6 binding sites (M1 and M3) abolish their ability to compete in EMSA (Figure 3E).","tracks":[{"project":"pmc-enju-pas","denotations":[{"id":"T7758","span":{"begin":107,"end":108},"obj":"-RRB-"},{"id":"T7757","span":{"begin":105,"end":107},"obj":"NN"},{"id":"T7756","span":{"begin":98,"end":104},"obj":"NN"},{"id":"T7755","span":{"begin":97,"end":98},"obj":"-LRB-"},{"id":"T7754","span":{"begin":92,"end":96},"obj":"NN"},{"id":"T7753","span":{"begin":89,"end":91},"obj":"IN"},{"id":"T7752","span":{"begin":81,"end":88},"obj":"VB"},{"id":"T7751","span":{"begin":78,"end":80},"obj":"TO"},{"id":"T7750","span":{"begin":70,"end":77},"obj":"NN"},{"id":"T7749","span":{"begin":64,"end":69},"obj":"PRP-DOLLAR-"},{"id":"T7748","span":{"begin":56,"end":63},"obj":"VB"},{"id":"T7747","span":{"begin":54,"end":55},"obj":"-RRB-"},{"id":"T7746","span":{"begin":52,"end":54},"obj":"NN"},{"id":"T7745","span":{"begin":48,"end":51},"obj":"CC"},{"id":"T7744","span":{"begin":45,"end":47},"obj":"NN"},{"id":"T7743","span":{"begin":44,"end":45},"obj":"-LRB-"},{"id":"T7742","span":{"begin":38,"end":43},"obj":"NN"},{"id":"T7741","span":{"begin":30,"end":37},"obj":"NN"},{"id":"T7740","span":{"begin":21,"end":29},"obj":"NN"},{"id":"T7739","span":{"begin":12,"end":20},"obj":"JJ"},{"id":"T7738","span":{"begin":9,"end":11},"obj":"IN"},{"id":"T7737","span":{"begin":0,"end":8},"obj":"NN"}],"relations":[{"id":"R5273","pred":"arg2Of","subj":"T7742","obj":"T7738"},{"id":"R5274","pred":"arg1Of","subj":"T7742","obj":"T7739"},{"id":"R5275","pred":"arg1Of","subj":"T7742","obj":"T7740"},{"id":"R5276","pred":"arg1Of","subj":"T7742","obj":"T7741"},{"id":"R5277","pred":"arg1Of","subj":"T7742","obj":"T7743"},{"id":"R5278","pred":"arg1Of","subj":"T7744","obj":"T7745"},{"id":"R5279","pred":"arg2Of","subj":"T7745","obj":"T7743"},{"id":"R5280","pred":"arg2Of","subj":"T7746","obj":"T7745"},{"id":"R5282","pred":"arg3Of","subj":"T7747","obj":"T7743"},{"id":"R5286","pred":"arg2Of","subj":"T7750","obj":"T7748"},{"id":"R5287","pred":"arg1Of","subj":"T7750","obj":"T7749"},{"id":"R5288","pred":"modOf","subj":"T7750","obj":"T7751"},{"id":"R5289","pred":"arg1Of","subj":"T7752","obj":"T7751"},{"id":"R5290","pred":"arg1Of","subj":"T7752","obj":"T7753"},{"id":"R5294","pred":"arg2Of","subj":"T7754","obj":"T7753"},{"id":"R5295","pred":"arg1Of","subj":"T7754","obj":"T7755"},{"id":"R5297","pred":"arg2Of","subj":"T7757","obj":"T7755"},{"id":"R5298","pred":"arg1Of","subj":"T7757","obj":"T7756"},{"id":"R5299","pred":"arg3Of","subj":"T7758","obj":"T7755"},{"id":"R5405","pred":"arg1Of","subj":"T7737","obj":"T7738"},{"id":"R5406","pred":"arg1Of","subj":"T7737","obj":"T7748"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T7758","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7757","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7756","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7755","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7754","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7753","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7752","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7751","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7750","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7749","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7748","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7747","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7746","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7745","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7744","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7743","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7742","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7741","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7740","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7739","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7738","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7737","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T7979","span":{"begin":25,"end":29},"obj":"http://www.uniprot.org/uniprot/P35712"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T7979","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"GO-MF","denotations":[{"id":"T7280","span":{"begin":30,"end":37},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"attributes":[{"subj":"T7280","pred":"source","obj":"GO-MF"}]},{"project":"sentences","denotations":[{"id":"T7156","span":{"begin":0,"end":109},"obj":"Sentence"},{"id":"T132","span":{"begin":0,"end":109},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T7156","pred":"source","obj":"sentences"},{"subj":"T132","pred":"source","obj":"sentences"}]},{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T8858","span":{"begin":12,"end":63},"obj":"Binding"},{"id":"T8838","span":{"begin":45,"end":47},"obj":"Entity"},{"id":"T8832","span":{"begin":21,"end":29},"obj":"Protein"},{"id":"T8827","span":{"begin":25,"end":29},"obj":"Protein"},{"id":"T8823","span":{"begin":38,"end":55},"obj":"Entity"},{"id":"T8757","span":{"begin":21,"end":29},"obj":"Protein"}],"relations":[{"id":"R6170","pred":"themeOf","subj":"T8757","obj":"T8858"}],"attributes":[{"subj":"T8858","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T8838","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T8832","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T8827","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T8823","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T8757","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T8481","span":{"begin":108,"end":109},"obj":"."},{"id":"T8480","span":{"begin":107,"end":108},"obj":"-RRB-"},{"id":"T8479","span":{"begin":105,"end":107},"obj":"NNP"},{"id":"T8478","span":{"begin":98,"end":104},"obj":"NNP"},{"id":"T8477","span":{"begin":97,"end":98},"obj":"-LRB-"},{"id":"T8476","span":{"begin":92,"end":96},"obj":"NNP"},{"id":"T8475","span":{"begin":89,"end":91},"obj":"IN"},{"id":"T8474","span":{"begin":81,"end":88},"obj":"VB"},{"id":"T8473","span":{"begin":78,"end":80},"obj":"TO"},{"id":"T8472","span":{"begin":70,"end":77},"obj":"NN"},{"id":"T8471","span":{"begin":64,"end":69},"obj":"PRP$"},{"id":"T8470","span":{"begin":56,"end":63},"obj":"VBP"},{"id":"T8469","span":{"begin":54,"end":55},"obj":"-RRB-"},{"id":"T8468","span":{"begin":52,"end":54},"obj":"CD"},{"id":"T8467","span":{"begin":48,"end":51},"obj":"CC"},{"id":"T8466","span":{"begin":45,"end":47},"obj":"CD"},{"id":"T8465","span":{"begin":44,"end":45},"obj":"-LRB-"},{"id":"T8464","span":{"begin":38,"end":43},"obj":"NNS"},{"id":"T8463","span":{"begin":30,"end":37},"obj":"JJ"},{"id":"T8462","span":{"begin":21,"end":29},"obj":"NNP"},{"id":"T8461","span":{"begin":12,"end":20},"obj":"JJ"},{"id":"T8460","span":{"begin":9,"end":11},"obj":"IN"},{"id":"T8459","span":{"begin":0,"end":8},"obj":"NNP"}],"relations":[{"id":"R5911","pred":"nsubj","subj":"T8459","obj":"T8470"},{"id":"R5913","pred":"prep","subj":"T8460","obj":"T8459"},{"id":"R5914","pred":"amod","subj":"T8461","obj":"T8464"},{"id":"R5915","pred":"nmod","subj":"T8462","obj":"T8464"},{"id":"R5917","pred":"amod","subj":"T8463","obj":"T8464"},{"id":"R5918","pred":"pobj","subj":"T8464","obj":"T8460"},{"id":"R5920","pred":"punct","subj":"T8465","obj":"T8464"},{"id":"R5921","pred":"appos","subj":"T8466","obj":"T8464"},{"id":"R5922","pred":"cc","subj":"T8467","obj":"T8466"},{"id":"R5923","pred":"conj","subj":"T8468","obj":"T8466"},{"id":"R5925","pred":"punct","subj":"T8469","obj":"T8464"},{"id":"R5926","pred":"ROOT","subj":"T8470","obj":"T8470"},{"id":"R5928","pred":"poss","subj":"T8471","obj":"T8472"},{"id":"R5929","pred":"dobj","subj":"T8472","obj":"T8470"},{"id":"R5930","pred":"aux","subj":"T8473","obj":"T8474"},{"id":"R5932","pred":"acl","subj":"T8474","obj":"T8472"},{"id":"R5933","pred":"prep","subj":"T8475","obj":"T8474"},{"id":"R5934","pred":"pobj","subj":"T8476","obj":"T8475"},{"id":"R5936","pred":"punct","subj":"T8477","obj":"T8479"},{"id":"R5937","pred":"compound","subj":"T8478","obj":"T8479"},{"id":"R5938","pred":"appos","subj":"T8479","obj":"T8476"},{"id":"R5940","pred":"punct","subj":"T8480","obj":"T8479"},{"id":"R5941","pred":"punct","subj":"T8481","obj":"T8470"}],"attributes":[{"subj":"T8481","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8480","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8479","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8478","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8477","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8476","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8475","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8474","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8473","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8472","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8471","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8470","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8469","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8468","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8467","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8466","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8465","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8464","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8463","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8462","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8461","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8460","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T8459","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T7371","span":{"begin":21,"end":24},"obj":"Protein"},{"id":"T7376","span":{"begin":56,"end":63},"obj":"Negative_regulation"},{"id":"T7375","span":{"begin":56,"end":63},"obj":"Negative_regulation"},{"id":"T7374","span":{"begin":81,"end":88},"obj":"Binding"},{"id":"T7373","span":{"begin":81,"end":88},"obj":"Binding"},{"id":"T7372","span":{"begin":25,"end":29},"obj":"Protein"}],"relations":[{"id":"R4994","pred":"themeOf","subj":"T7371","obj":"T7373"},{"id":"R4995","pred":"themeOf","subj":"T7372","obj":"T7374"},{"id":"R4996","pred":"themeOf","subj":"T7373","obj":"T7375"},{"id":"R4997","pred":"themeOf","subj":"T7374","obj":"T7376"}],"attributes":[{"subj":"T7371","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T7376","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T7375","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T7374","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T7373","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T7372","pred":"source","obj":"bionlp-st-ge-2016-test-tees"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"pmc-enju-pas","color":"#bdec93","default":true},{"id":"bionlp-st-ge-2016-uniprot","color":"#ec93d8"},{"id":"GO-MF","color":"#93ece6"},{"id":"sentences","color":"#eccc93"},{"id":"bionlp-st-ge-2016-test-ihmc","color":"#b293ec"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#93ec98"},{"id":"bionlp-st-ge-2016-test-tees","color":"#ec93a7"}]}]}}