PMC:1359074 / 18529-18638
Annnotations
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7758 | 107-108 | -RRB- | denotes | ) |
| T7757 | 105-107 | NN | denotes | 3E |
| T7756 | 98-104 | NN | denotes | Figure |
| T7755 | 97-98 | -LRB- | denotes | ( |
| T7754 | 92-96 | NN | denotes | EMSA |
| T7753 | 89-91 | IN | denotes | in |
| T7752 | 81-88 | VB | denotes | compete |
| T7751 | 78-80 | TO | denotes | to |
| T7750 | 70-77 | NN | denotes | ability |
| T7749 | 64-69 | PRP-DOLLAR- | denotes | their |
| T7748 | 56-63 | VB | denotes | abolish |
| T7747 | 54-55 | -RRB- | denotes | ) |
| T7746 | 52-54 | NN | denotes | M3 |
| T7745 | 48-51 | CC | denotes | and |
| T7744 | 45-47 | NN | denotes | M1 |
| T7743 | 44-45 | -LRB- | denotes | ( |
| T7742 | 38-43 | NN | denotes | sites |
| T7741 | 30-37 | NN | denotes | binding |
| T7740 | 21-29 | NN | denotes | Sox/Sox6 |
| T7739 | 12-20 | JJ | denotes | putative |
| T7738 | 9-11 | IN | denotes | of |
| T7737 | 0-8 | NN | denotes | Ablation |
| R5273 | T7742 | T7738 | arg2Of | sites,of |
| R5274 | T7742 | T7739 | arg1Of | sites,putative |
| R5275 | T7742 | T7740 | arg1Of | sites,Sox/Sox6 |
| R5276 | T7742 | T7741 | arg1Of | sites,binding |
| R5277 | T7742 | T7743 | arg1Of | sites,( |
| R5278 | T7744 | T7745 | arg1Of | M1,and |
| R5279 | T7745 | T7743 | arg2Of | and,( |
| R5280 | T7746 | T7745 | arg2Of | M3,and |
| R5282 | T7747 | T7743 | arg3Of | ),( |
| R5286 | T7750 | T7748 | arg2Of | ability,abolish |
| R5287 | T7750 | T7749 | arg1Of | ability,their |
| R5288 | T7750 | T7751 | modOf | ability,to |
| R5289 | T7752 | T7751 | arg1Of | compete,to |
| R5290 | T7752 | T7753 | arg1Of | compete,in |
| R5294 | T7754 | T7753 | arg2Of | EMSA,in |
| R5295 | T7754 | T7755 | arg1Of | EMSA,( |
| R5297 | T7757 | T7755 | arg2Of | 3E,( |
| R5298 | T7757 | T7756 | arg1Of | 3E,Figure |
| R5299 | T7758 | T7755 | arg3Of | ),( |
| R5405 | T7737 | T7738 | arg1Of | Ablation,of |
| R5406 | T7737 | T7748 | arg1Of | Ablation,abolish |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7979 | 25-29 | http://www.uniprot.org/uniprot/P35712 | denotes | Sox6 |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7280 | 30-37 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7156 | 0-109 | Sentence | denotes | Ablation of putative Sox/Sox6 binding sites (M1 and M3) abolish their ability to compete in EMSA (Figure 3E). |
| T132 | 0-109 | Sentence | denotes | Ablation of putative Sox/Sox6 binding sites (M1 and M3) abolish their ability to compete in EMSA (Figure 3E). |
bionlp-st-ge-2016-test-ihmc
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8858 | 12-63 | Binding | denotes | putative Sox/Sox6 binding sites (M1 and M3) abolish |
| T8838 | 45-47 | Entity | denotes | M1 |
| T8832 | 21-29 | Protein | denotes | Sox/Sox6 |
| T8827 | 25-29 | Protein | denotes | Sox6 |
| T8823 | 38-55 | Entity | denotes | sites (M1 and M3) |
| T8757 | 21-29 | Protein | denotes | Sox/Sox6 |
| R6170 | T8757 | T8858 | themeOf | Sox/Sox6,putative Sox/Sox6 binding sites (M1 and M3) abolish |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T8481 | 108-109 | . | denotes | . |
| T8480 | 107-108 | -RRB- | denotes | ) |
| T8479 | 105-107 | NNP | denotes | 3E |
| T8478 | 98-104 | NNP | denotes | Figure |
| T8477 | 97-98 | -LRB- | denotes | ( |
| T8476 | 92-96 | NNP | denotes | EMSA |
| T8475 | 89-91 | IN | denotes | in |
| T8474 | 81-88 | VB | denotes | compete |
| T8473 | 78-80 | TO | denotes | to |
| T8472 | 70-77 | NN | denotes | ability |
| T8471 | 64-69 | PRP$ | denotes | their |
| T8470 | 56-63 | VBP | denotes | abolish |
| T8469 | 54-55 | -RRB- | denotes | ) |
| T8468 | 52-54 | CD | denotes | M3 |
| T8467 | 48-51 | CC | denotes | and |
| T8466 | 45-47 | CD | denotes | M1 |
| T8465 | 44-45 | -LRB- | denotes | ( |
| T8464 | 38-43 | NNS | denotes | sites |
| T8463 | 30-37 | JJ | denotes | binding |
| T8462 | 21-29 | NNP | denotes | Sox/Sox6 |
| T8461 | 12-20 | JJ | denotes | putative |
| T8460 | 9-11 | IN | denotes | of |
| T8459 | 0-8 | NNP | denotes | Ablation |
| R5911 | T8459 | T8470 | nsubj | Ablation,abolish |
| R5913 | T8460 | T8459 | prep | of,Ablation |
| R5914 | T8461 | T8464 | amod | putative,sites |
| R5915 | T8462 | T8464 | nmod | Sox/Sox6,sites |
| R5917 | T8463 | T8464 | amod | binding,sites |
| R5918 | T8464 | T8460 | pobj | sites,of |
| R5920 | T8465 | T8464 | punct | (,sites |
| R5921 | T8466 | T8464 | appos | M1,sites |
| R5922 | T8467 | T8466 | cc | and,M1 |
| R5923 | T8468 | T8466 | conj | M3,M1 |
| R5925 | T8469 | T8464 | punct | ),sites |
| R5926 | T8470 | T8470 | ROOT | abolish,abolish |
| R5928 | T8471 | T8472 | poss | their,ability |
| R5929 | T8472 | T8470 | dobj | ability,abolish |
| R5930 | T8473 | T8474 | aux | to,compete |
| R5932 | T8474 | T8472 | acl | compete,ability |
| R5933 | T8475 | T8474 | prep | in,compete |
| R5934 | T8476 | T8475 | pobj | EMSA,in |
| R5936 | T8477 | T8479 | punct | (,3E |
| R5937 | T8478 | T8479 | compound | Figure,3E |
| R5938 | T8479 | T8476 | appos | 3E,EMSA |
| R5940 | T8480 | T8479 | punct | ),3E |
| R5941 | T8481 | T8470 | punct | .,abolish |
bionlp-st-ge-2016-test-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T7371 | 21-24 | Protein | denotes | Sox |
| T7376 | 56-63 | Negative_regulation | denotes | abolish |
| T7375 | 56-63 | Negative_regulation | denotes | abolish |
| T7374 | 81-88 | Binding | denotes | compete |
| T7373 | 81-88 | Binding | denotes | compete |
| T7372 | 25-29 | Protein | denotes | Sox6 |
| R4994 | T7371 | T7373 | themeOf | Sox,compete |
| R4995 | T7372 | T7374 | themeOf | Sox6,compete |
| R4996 | T7373 | T7375 | themeOf | compete,abolish |
| R4997 | T7374 | T7376 | themeOf | compete,abolish |