PMC:1359074 / 18391-18528
Annnotations
pmc-enju-pas
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bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T7978","span":{"begin":25,"end":29},"obj":"http://www.uniprot.org/uniprot/P35712"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"The intact consensus Sox/Sox6 binding sites of the DNA probe are required for the binding, as shown in the competition assay (Figure 3E)."}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T7279","span":{"begin":82,"end":89},"obj":"http://purl.obolibrary.org/obo/GO_0005488"},{"id":"T7278","span":{"begin":30,"end":37},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"text":"The intact consensus Sox/Sox6 binding sites of the DNA probe are required for the binding, as shown in the competition assay (Figure 3E)."}
sentences
{"project":"sentences","denotations":[{"id":"T7155","span":{"begin":0,"end":137},"obj":"Sentence"},{"id":"T131","span":{"begin":0,"end":137},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The intact consensus Sox/Sox6 binding sites of the DNA probe are required for the binding, as shown in the competition assay (Figure 3E)."}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T8855","span":{"begin":0,"end":60},"obj":"Binding"},{"id":"T8840","span":{"begin":38,"end":43},"obj":"Entity"},{"id":"T8820","span":{"begin":103,"end":136},"obj":"Entity"},{"id":"T8796","span":{"begin":47,"end":60},"obj":"Entity"},{"id":"T8795","span":{"begin":0,"end":60},"obj":"Protein"}],"relations":[{"id":"R6192","pred":"themeOf","subj":"T8795","obj":"T8855"}],"text":"The intact consensus Sox/Sox6 binding sites of the DNA probe are required for the binding, as shown in the competition assay (Figure 3E)."}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T8458","span":{"begin":136,"end":137},"obj":"."},{"id":"T8457","span":{"begin":135,"end":136},"obj":"-RRB-"},{"id":"T8456","span":{"begin":133,"end":135},"obj":"CD"},{"id":"T8455","span":{"begin":126,"end":132},"obj":"NN"},{"id":"T8454","span":{"begin":125,"end":126},"obj":"-LRB-"},{"id":"T8453","span":{"begin":119,"end":124},"obj":"NN"},{"id":"T8452","span":{"begin":107,"end":118},"obj":"NN"},{"id":"T8451","span":{"begin":103,"end":106},"obj":"DT"},{"id":"T8450","span":{"begin":100,"end":102},"obj":"IN"},{"id":"T8449","span":{"begin":94,"end":99},"obj":"VBN"},{"id":"T8448","span":{"begin":91,"end":93},"obj":"IN"},{"id":"T8447","span":{"begin":89,"end":90},"obj":","},{"id":"T8446","span":{"begin":82,"end":89},"obj":"JJ"},{"id":"T8445","span":{"begin":78,"end":81},"obj":"DT"},{"id":"T8444","span":{"begin":74,"end":77},"obj":"IN"},{"id":"T8443","span":{"begin":65,"end":73},"obj":"VBN"},{"id":"T8442","span":{"begin":61,"end":64},"obj":"VBP"},{"id":"T8441","span":{"begin":55,"end":60},"obj":"NN"},{"id":"T8440","span":{"begin":51,"end":54},"obj":"NNP"},{"id":"T8439","span":{"begin":47,"end":50},"obj":"DT"},{"id":"T8438","span":{"begin":44,"end":46},"obj":"IN"},{"id":"T8437","span":{"begin":38,"end":43},"obj":"NNS"},{"id":"T8436","span":{"begin":30,"end":37},"obj":"JJ"},{"id":"T8435","span":{"begin":21,"end":29},"obj":"NNP"},{"id":"T8434","span":{"begin":11,"end":20},"obj":"NN"},{"id":"T8433","span":{"begin":4,"end":10},"obj":"JJ"},{"id":"T8432","span":{"begin":0,"end":3},"obj":"DT"}],"relations":[{"id":"R5874","pred":"det","subj":"T8432","obj":"T8434"},{"id":"R5875","pred":"amod","subj":"T8433","obj":"T8434"},{"id":"R5876","pred":"ROOT","subj":"T8434","obj":"T8434"},{"id":"R5878","pred":"appos","subj":"T8435","obj":"T8434"},{"id":"R5880","pred":"amod","subj":"T8436","obj":"T8437"},{"id":"R5882","pred":"nsubjpass","subj":"T8437","obj":"T8443"},{"id":"R5883","pred":"prep","subj":"T8438","obj":"T8437"},{"id":"R5885","pred":"det","subj":"T8439","obj":"T8441"},{"id":"R5886","pred":"compound","subj":"T8440","obj":"T8441"},{"id":"R5888","pred":"pobj","subj":"T8441","obj":"T8438"},{"id":"R5889","pred":"auxpass","subj":"T8442","obj":"T8443"},{"id":"R5890","pred":"relcl","subj":"T8443","obj":"T8434"},{"id":"R5892","pred":"prep","subj":"T8444","obj":"T8443"},{"id":"R5893","pred":"det","subj":"T8445","obj":"T8446"},{"id":"R5895","pred":"pobj","subj":"T8446","obj":"T8444"},{"id":"R5896","pred":"punct","subj":"T8447","obj":"T8443"},{"id":"R5898","pred":"mark","subj":"T8448","obj":"T8449"},{"id":"R5899","pred":"advcl","subj":"T8449","obj":"T8443"},{"id":"R5900","pred":"prep","subj":"T8450","obj":"T8449"},{"id":"R5902","pred":"det","subj":"T8451","obj":"T8453"},{"id":"R5903","pred":"compound","subj":"T8452","obj":"T8453"},{"id":"R5905","pred":"pobj","subj":"T8453","obj":"T8450"},{"id":"R5906","pred":"punct","subj":"T8454","obj":"T8455"},{"id":"R5907","pred":"appos","subj":"T8455","obj":"T8453"},{"id":"R5908","pred":"nummod","subj":"T8456","obj":"T8455"},{"id":"R5909","pred":"punct","subj":"T8457","obj":"T8455"},{"id":"R5910","pred":"punct","subj":"T8458","obj":"T8443"}],"text":"The intact consensus Sox/Sox6 binding sites of the DNA probe are required for the binding, as shown in the competition assay (Figure 3E)."}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T7370","span":{"begin":65,"end":73},"obj":"Positive_regulation"},{"id":"T7369","span":{"begin":65,"end":73},"obj":"Positive_regulation"},{"id":"T7368","span":{"begin":82,"end":89},"obj":"Binding"},{"id":"T7367","span":{"begin":82,"end":89},"obj":"Binding"},{"id":"T7366","span":{"begin":25,"end":29},"obj":"Protein"},{"id":"T7365","span":{"begin":21,"end":24},"obj":"Protein"}],"relations":[{"id":"R4990","pred":"themeOf","subj":"T7365","obj":"T7367"},{"id":"R4991","pred":"themeOf","subj":"T7366","obj":"T7368"},{"id":"R4992","pred":"themeOf","subj":"T7367","obj":"T7369"},{"id":"R4993","pred":"themeOf","subj":"T7368","obj":"T7370"}],"text":"The intact consensus Sox/Sox6 binding sites of the DNA probe are required for the binding, as shown in the competition assay (Figure 3E)."}
testone
{"project":"testone","denotations":[{"id":"T7051","span":{"begin":82,"end":89},"obj":"Binding"},{"id":"T7050","span":{"begin":65,"end":73},"obj":"Positive_regulation"}],"relations":[{"id":"R4912","pred":"themeOf","subj":"T7051","obj":"T7050"}],"text":"The intact consensus Sox/Sox6 binding sites of the DNA probe are required for the binding, as shown in the competition assay (Figure 3E)."}