PMC:1359074 / 114-387
Annnotations
pmc-enju-pas
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is a member of the Sox transcription factor family that is defined by the conserved high mobility group (HMG) DNA binding domain, first described in the testis determining gene, Sry. Previous studies have suggested that Sox6 plays a role in the developmen"}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T148","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T149","span":{"begin":196,"end":199},"obj":"Protein"},{"id":"T150","span":{"begin":238,"end":242},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"on\n\nAbstract\nSox6 is a member of the Sox transcription factor family that is defined by the conserved high mobility group (HMG) DNA binding domain, first described in the testis determining gene, Sry. Previous studies have suggested that Sox6 plays a role in the developmen"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T474","span":{"begin":13,"end":17},"obj":"http://www.uniprot.org/uniprot/P35712"},{"id":"T475","span":{"begin":238,"end":242},"obj":"http://www.uniprot.org/uniprot/P35712"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"on\n\nAbstract\nSox6 is a member of the Sox transcription factor family that is defined by the conserved high mobility group (HMG) DNA binding domain, first described in the testis determining gene, Sry. Previous studies have suggested that Sox6 plays a role in the developmen"}
UBERON-AE
{"project":"UBERON-AE","denotations":[{"id":"T86","span":{"begin":171,"end":177},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"}],"text":"on\n\nAbstract\nSox6 is a member of the Sox transcription factor family that is defined by the conserved high mobility group (HMG) DNA binding domain, first described in the testis determining gene, Sry. Previous studies have suggested that Sox6 plays a role in the developmen"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T110","span":{"begin":41,"end":54},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"text":"on\n\nAbstract\nSox6 is a member of the Sox transcription factor family that is defined by the conserved high mobility group (HMG) DNA binding domain, first described in the testis determining gene, Sry. Previous studies have suggested that Sox6 plays a role in the developmen"}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T169","span":{"begin":128,"end":139},"obj":"http://purl.obolibrary.org/obo/GO_0003677"},{"id":"T170","span":{"begin":128,"end":146},"obj":"http://purl.obolibrary.org/obo/GO_0050692"},{"id":"T171","span":{"begin":132,"end":139},"obj":"http://purl.obolibrary.org/obo/GO_0005488"}],"text":"on\n\nAbstract\nSox6 is a member of the Sox transcription factor family that is defined by the conserved high mobility group (HMG) DNA binding domain, first described in the testis determining gene, Sry. Previous studies have suggested that Sox6 plays a role in the developmen"}
sentences
{"project":"sentences","denotations":[{"id":"T3","span":{"begin":4,"end":12},"obj":"Sentence"},{"id":"T4","span":{"begin":13,"end":200},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"on\n\nAbstract\nSox6 is a member of the Sox transcription factor family that is defined by the conserved high mobility group (HMG) DNA binding domain, first described in the testis determining gene, Sry. Previous studies have suggested that Sox6 plays a role in the developmen"}
simple1
{"project":"simple1","denotations":[{"id":"T235","span":{"begin":238,"end":242},"obj":"Protein"},{"id":"T234","span":{"begin":196,"end":199},"obj":"Protein"},{"id":"T233","span":{"begin":13,"end":17},"obj":"Protein"}],"text":"on\n\nAbstract\nSox6 is a member of the Sox transcription factor family that is defined by the conserved high mobility group (HMG) DNA binding domain, first described in the testis determining gene, Sry. Previous studies have suggested that Sox6 plays a role in the developmen"}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T878","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T879","span":{"begin":196,"end":199},"obj":"Protein"},{"id":"T880","span":{"begin":238,"end":242},"obj":"Protein"}],"text":"on\n\nAbstract\nSox6 is a member of the Sox transcription factor family that is defined by the conserved high mobility group (HMG) DNA binding domain, first described in the testis determining gene, Sry. Previous studies have suggested that Sox6 plays a role in the developmen"}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T486","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T487","span":{"begin":196,"end":199},"obj":"Protein"},{"id":"T488","span":{"begin":238,"end":242},"obj":"Protein"}],"text":"on\n\nAbstract\nSox6 is a member of the Sox transcription factor family that is defined by the conserved high mobility group (HMG) DNA binding domain, first described in the testis determining gene, Sry. Previous studies have suggested that Sox6 plays a role in the developmen"}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T517","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T518","span":{"begin":196,"end":199},"obj":"Protein"},{"id":"T519","span":{"begin":238,"end":242},"obj":"Protein"}],"text":"on\n\nAbstract\nSox6 is a member of the Sox transcription factor family that is defined by the conserved high mobility group (HMG) DNA binding domain, first described in the testis determining gene, Sry. Previous studies have suggested that Sox6 plays a role in the developmen"}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T875","span":{"begin":167,"end":199},"obj":"Localization"},{"id":"T838","span":{"begin":37,"end":40},"obj":"Protein"},{"id":"T844","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T846","span":{"begin":167,"end":199},"obj":"Protein"},{"id":"T851","span":{"begin":33,"end":68},"obj":"Protein"},{"id":"T856","span":{"begin":238,"end":242},"obj":"Protein"},{"id":"T864","span":{"begin":167,"end":199},"obj":"Protein"},{"id":"T865","span":{"begin":128,"end":199},"obj":"Entity"}],"relations":[{"id":"R576","pred":"themeOf","subj":"T846","obj":"T875"}],"text":"on\n\nAbstract\nSox6 is a member of the Sox transcription factor family that is defined by the conserved high mobility group (HMG) DNA binding domain, first described in the testis determining gene, Sry. Previous studies have suggested that Sox6 plays a role in the developmen"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T628","span":{"begin":259,"end":262},"obj":"DT"},{"id":"T627","span":{"begin":256,"end":258},"obj":"IN"},{"id":"T626","span":{"begin":251,"end":255},"obj":"NN"},{"id":"T625","span":{"begin":249,"end":250},"obj":"DT"},{"id":"T624","span":{"begin":243,"end":248},"obj":"NNS"},{"id":"T623","span":{"begin":238,"end":242},"obj":"JJ"},{"id":"T622","span":{"begin":233,"end":237},"obj":"IN"},{"id":"T621","span":{"begin":223,"end":232},"obj":"VBN"},{"id":"T620","span":{"begin":218,"end":222},"obj":"VBP"},{"id":"T619","span":{"begin":210,"end":217},"obj":"NNS"},{"id":"T618","span":{"begin":201,"end":209},"obj":"JJ"},{"id":"T617","span":{"begin":199,"end":200},"obj":"."},{"id":"T616","span":{"begin":196,"end":199},"obj":"NNP"},{"id":"T615","span":{"begin":194,"end":195},"obj":","},{"id":"T614","span":{"begin":190,"end":194},"obj":"NN"},{"id":"T613","span":{"begin":178,"end":189},"obj":"VBG"},{"id":"T612","span":{"begin":171,"end":177},"obj":"NN"},{"id":"T611","span":{"begin":167,"end":170},"obj":"DT"},{"id":"T610","span":{"begin":164,"end":166},"obj":"IN"},{"id":"T609","span":{"begin":154,"end":163},"obj":"VBN"},{"id":"T608","span":{"begin":148,"end":153},"obj":"JJ"},{"id":"T607","span":{"begin":146,"end":147},"obj":","},{"id":"T606","span":{"begin":140,"end":146},"obj":"NN"},{"id":"T605","span":{"begin":132,"end":139},"obj":"JJ"},{"id":"T604","span":{"begin":128,"end":131},"obj":"NNP"},{"id":"T603","span":{"begin":126,"end":127},"obj":"-RRB-"},{"id":"T602","span":{"begin":123,"end":126},"obj":"NNP"},{"id":"T601","span":{"begin":122,"end":123},"obj":"-LRB-"},{"id":"T600","span":{"begin":116,"end":121},"obj":"NN"},{"id":"T599","span":{"begin":107,"end":115},"obj":"NN"},{"id":"T598","span":{"begin":102,"end":106},"obj":"JJ"},{"id":"T597","span":{"begin":92,"end":101},"obj":"JJ"},{"id":"T596","span":{"begin":88,"end":91},"obj":"DT"},{"id":"T595","span":{"begin":85,"end":87},"obj":"IN"},{"id":"T594","span":{"begin":77,"end":84},"obj":"VBN"},{"id":"T593","span":{"begin":74,"end":76},"obj":"VBZ"},{"id":"T592","span":{"begin":69,"end":73},"obj":"WDT"},{"id":"T591","span":{"begin":62,"end":68},"obj":"NN"},{"id":"T590","span":{"begin":55,"end":61},"obj":"NN"},{"id":"T589","span":{"begin":41,"end":54},"obj":"NN"},{"id":"T588","span":{"begin":37,"end":40},"obj":"NNPS"},{"id":"T587","span":{"begin":33,"end":36},"obj":"DT"},{"id":"T586","span":{"begin":30,"end":32},"obj":"IN"},{"id":"T585","span":{"begin":23,"end":29},"obj":"NN"},{"id":"T584","span":{"begin":21,"end":22},"obj":"DT"},{"id":"T583","span":{"begin":18,"end":20},"obj":"VBZ"},{"id":"T582","span":{"begin":13,"end":17},"obj":"NNP"}],"relations":[{"id":"R279","pred":"ROOT","subj":"T583","obj":"T583"},{"id":"R280","pred":"det","subj":"T584","obj":"T585"},{"id":"R281","pred":"attr","subj":"T585","obj":"T583"},{"id":"R282","pred":"prep","subj":"T586","obj":"T585"},{"id":"R283","pred":"det","subj":"T587","obj":"T591"},{"id":"R284","pred":"compound","subj":"T588","obj":"T591"},{"id":"R285","pred":"compound","subj":"T589","obj":"T590"},{"id":"R286","pred":"compound","subj":"T590","obj":"T591"},{"id":"R287","pred":"pobj","subj":"T591","obj":"T586"},{"id":"R288","pred":"nsubjpass","subj":"T592","obj":"T594"},{"id":"R289","pred":"auxpass","subj":"T593","obj":"T594"},{"id":"R290","pred":"relcl","subj":"T594","obj":"T585"},{"id":"R291","pred":"agent","subj":"T595","obj":"T594"},{"id":"R292","pred":"det","subj":"T596","obj":"T600"},{"id":"R293","pred":"amod","subj":"T597","obj":"T600"},{"id":"R294","pred":"amod","subj":"T598","obj":"T600"},{"id":"R295","pred":"compound","subj":"T599","obj":"T600"},{"id":"R296","pred":"pobj","subj":"T600","obj":"T595"},{"id":"R297","pred":"punct","subj":"T601","obj":"T602"},{"id":"R298","pred":"appos","subj":"T602","obj":"T600"},{"id":"R299","pred":"punct","subj":"T603","obj":"T602"},{"id":"R300","pred":"compound","subj":"T604","obj":"T606"},{"id":"R301","pred":"amod","subj":"T605","obj":"T606"},{"id":"R302","pred":"conj","subj":"T606","obj":"T600"},{"id":"R303","pred":"punct","subj":"T607","obj":"T606"},{"id":"R304","pred":"advmod","subj":"T608","obj":"T609"},{"id":"R305","pred":"acl","subj":"T609","obj":"T600"},{"id":"R306","pred":"prep","subj":"T610","obj":"T609"},{"id":"R307","pred":"det","subj":"T611","obj":"T614"},{"id":"R308","pred":"amod","subj":"T612","obj":"T614"},{"id":"R309","pred":"amod","subj":"T613","obj":"T614"},{"id":"R310","pred":"pobj","subj":"T614","obj":"T610"},{"id":"R311","pred":"punct","subj":"T615","obj":"T614"},{"id":"R312","pred":"appos","subj":"T616","obj":"T614"},{"id":"R313","pred":"punct","subj":"T617","obj":"T583"},{"id":"R314","pred":"amod","subj":"T618","obj":"T619"},{"id":"R315","pred":"nsubj","subj":"T619","obj":"T621"},{"id":"R316","pred":"aux","subj":"T620","obj":"T621"},{"id":"R317","pred":"ROOT","subj":"T621","obj":"T621"},{"id":"R318","pred":"mark","subj":"T622","obj":"T624"},{"id":"R319","pred":"nsubj","subj":"T623","obj":"T624"},{"id":"R320","pre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is a member of the Sox transcription factor family that is defined by the conserved high mobility group (HMG) DNA binding domain, first described in the testis determining gene, Sry. Previous studies have suggested that Sox6 plays a role in the developmen"}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T208","span":{"begin":238,"end":242},"obj":"Protein"},{"id":"T207","span":{"begin":77,"end":84},"obj":"Negative_regulation"},{"id":"T206","span":{"begin":77,"end":84},"obj":"Negative_regulation"},{"id":"T205","span":{"begin":140,"end":146},"obj":"Entity"},{"id":"T204","span":{"begin":196,"end":199},"obj":"Protein"},{"id":"T203","span":{"begin":37,"end":68},"obj":"Protein"},{"id":"T202","span":{"begin":13,"end":17},"obj":"Protein"}],"relations":[{"id":"R28","pred":"themeOf","subj":"T202","obj":"T206"},{"id":"R29","pred":"themeOf","subj":"T203","obj":"T207"},{"id":"R30","pred":"partOf","subj":"T204","obj":"T205"},{"id":"R31","pred":"Site","subj":"T205","obj":"T206"},{"id":"R32","pred":"Site","subj":"T205","obj":"T207"}],"text":"on\n\nAbstract\nSox6 is a member of the Sox transcription factor family that is defined by the conserved high mobility group (HMG) DNA binding domain, first described in the testis determining gene, Sry. Previous studies have suggested that Sox6 plays a role in the developmen"}
testone
{"project":"testone","denotations":[{"id":"T22","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T23","span":{"begin":196,"end":199},"obj":"Protein"},{"id":"T24","span":{"begin":238,"end":242},"obj":"Protein"}],"text":"on\n\nAbstract\nSox6 is a member of the Sox transcription factor family that is defined by the conserved high mobility group (HMG) DNA binding domain, first described in the testis determining gene, Sry. Previous studies have suggested that Sox6 plays a role in the developmen"}
test3
{"project":"test3","denotations":[{"id":"T47","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T48","span":{"begin":196,"end":199},"obj":"Protein"},{"id":"T49","span":{"begin":238,"end":242},"obj":"Protein"},{"id":"T67","span":{"begin":13,"end":17},"obj":"Protein"},{"id":"T68","span":{"begin":196,"end":199},"obj":"Protein"},{"id":"T69","span":{"begin":238,"end":242},"obj":"Protein"}],"text":"on\n\nAbstract\nSox6 is a member of the Sox transcription factor family that is defined by the conserved high mobility group (HMG) DNA binding domain, first described in the testis determining gene, Sry. Previous studies have suggested that Sox6 plays a role in the developmen"}