PMC:1359074 / 0-181
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/1359074","sourcedb":"PMC","sourceid":"1359074","source_url":"http://www.ncbi.nlm.nih.gov/pmc/1359074","text":"Sox6 Directly Silences Epsilon Globin Expression in Definitive Erythropoiesis\nSox6 Silence Epsilon Globin Expression\n\nAbstract\nSox6 is a member of the Sox transcription factor famil","divisions":[{"label":"article-title","span":{"begin":0,"end":77}},{"label":"alt-title","span":{"begin":78,"end":116}}],"tracks":[{"project":"pmc-enju-pas","denotations":[{"id":"T250","span":{"begin":0,"end":4},"obj":"NN"},{"id":"T251","span":{"begin":5,"end":13},"obj":"NNP"},{"id":"T252","span":{"begin":14,"end":22},"obj":"NNP"},{"id":"T253","span":{"begin":23,"end":30},"obj":"NNP"},{"id":"T254","span":{"begin":31,"end":37},"obj":"NNP"},{"id":"T255","span":{"begin":38,"end":48},"obj":"NN"},{"id":"T256","span":{"begin":49,"end":51},"obj":"IN"},{"id":"T257","span":{"begin":52,"end":62},"obj":"JJ"},{"id":"T258","span":{"begin":63,"end":77},"obj":"NN"},{"id":"T267","span":{"begin":169,"end":175},"obj":"NN"},{"id":"T266","span":{"begin":155,"end":168},"obj":"NN"},{"id":"T265","span":{"begin":151,"end":154},"obj":"NN"},{"id":"T264","span":{"begin":147,"end":150},"obj":"DT"},{"id":"T263","span":{"begin":144,"end":146},"obj":"IN"},{"id":"T262","span":{"begin":137,"end":143},"obj":"NN"},{"id":"T261","span":{"begin":135,"end":136},"obj":"DT"},{"id":"T260","span":{"begin":132,"end":134},"obj":"VB"},{"id":"T259","span":{"begin":127,"end":131},"obj":"NN"}],"relations":[{"id":"R42","pred":"arg1Of","subj":"T254","obj":"T250"},{"id":"R43","pred":"arg1Of","subj":"T254","obj":"T251"},{"id":"R44","pred":"arg1Of","subj":"T254","obj":"T252"},{"id":"R45","pred":"arg1Of","subj":"T254","obj":"T253"},{"id":"R46","pred":"arg1Of","subj":"T255","obj":"T254"},{"id":"R47","pred":"arg1Of","subj":"T255","obj":"T256"},{"id":"R48","pred":"arg2Of","subj":"T258","obj":"T256"},{"id":"R49","pred":"arg1Of","subj":"T258","obj":"T257"},{"id":"R50","pred":"arg1Of","subj":"T259","obj":"T260"},{"id":"R51","pred":"arg2Of","subj":"T262","obj":"T260"},{"id":"R52","pred":"arg1Of","subj":"T262","obj":"T261"},{"id":"R53","pred":"arg1Of","subj":"T262","obj":"T263"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T250","pred":"source","obj":"pmc-enju-pas"},{"subj":"T251","pred":"source","obj":"pmc-enju-pas"},{"subj":"T252","pred":"source","obj":"pmc-enju-pas"},{"subj":"T253","pred":"source","obj":"pmc-enju-pas"},{"subj":"T254","pred":"source","obj":"pmc-enju-pas"},{"subj":"T255","pred":"source","obj":"pmc-enju-pas"},{"subj":"T256","pred":"source","obj":"pmc-enju-pas"},{"subj":"T257","pred":"source","obj":"pmc-enju-pas"},{"subj":"T258","pred":"source","obj":"pmc-enju-pas"},{"subj":"T267","pred":"source","obj":"pmc-enju-pas"},{"subj":"T266","pred":"source","obj":"pmc-enju-pas"},{"subj":"T265","pred":"source","obj":"pmc-enju-pas"},{"subj":"T264","pred":"source","obj":"pmc-enju-pas"},{"subj":"T263","pred":"source","obj":"pmc-enju-pas"},{"subj":"T262","pred":"source","obj":"pmc-enju-pas"},{"subj":"T261","pred":"source","obj":"pmc-enju-pas"},{"subj":"T260","pred":"source","obj":"pmc-enju-pas"},{"subj":"T259","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T148","span":{"begin":127,"end":131},"obj":"Protein"},{"id":"T146","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T147","span":{"begin":23,"end":37},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T148","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"},{"subj":"T146","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"},{"subj":"T147","pred":"source","obj":"bionlp-st-ge-2016-test-proteins"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T474","span":{"begin":127,"end":131},"obj":"http://www.uniprot.org/uniprot/P35712"},{"id":"T473","span":{"begin":0,"end":4},"obj":"http://www.uniprot.org/uniprot/P35712"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T474","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T473","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"GO-BP","denotations":[{"id":"T100","span":{"begin":31,"end":37},"obj":"http://purl.obolibrary.org/obo/GO_0005344"},{"id":"T104","span":{"begin":52,"end":77},"obj":"http://purl.obolibrary.org/obo/GO_0060318"},{"id":"T107","span":{"begin":63,"end":77},"obj":"http://purl.obolibrary.org/obo/GO_0030218"},{"id":"T110","span":{"begin":155,"end":168},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"attributes":[{"subj":"T100","pred":"source","obj":"GO-BP"},{"subj":"T104","pred":"source","obj":"GO-BP"},{"subj":"T107","pred":"source","obj":"GO-BP"},{"subj":"T110","pred":"source","obj":"GO-BP"}]},{"project":"GO-MF","denotations":[{"id":"T165","span":{"begin":31,"end":37},"obj":"http://purl.obolibrary.org/obo/GO_0005344"}],"attributes":[{"subj":"T165","pred":"source","obj":"GO-MF"}]},{"project":"sentences","denotations":[{"id":"T92","span":{"begin":0,"end":77},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":77},"obj":"Sentence"},{"id":"T2","span":{"begin":78,"end":116},"obj":"Sentence"},{"id":"T3","span":{"begin":118,"end":126},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T92","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"}]},{"project":"simple1","denotations":[{"id":"T231","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T232","span":{"begin":23,"end":37},"obj":"Protein"},{"id":"T233","span":{"begin":127,"end":131},"obj":"Protein"}],"attributes":[{"subj":"T231","pred":"source","obj":"simple1"},{"subj":"T232","pred":"source","obj":"simple1"},{"subj":"T233","pred":"source","obj":"simple1"}]},{"project":"BioNLP16_DUT","denotations":[{"id":"T878","span":{"begin":127,"end":131},"obj":"Protein"},{"id":"T876","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T877","span":{"begin":23,"end":37},"obj":"Protein"},{"id":"T895","span":{"begin":38,"end":48},"obj":"Gene_expression"}],"relations":[{"id":"R585","pred":"themeOf","subj":"T877","obj":"T895"}],"attributes":[{"subj":"T878","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T876","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T877","pred":"source","obj":"BioNLP16_DUT"},{"subj":"T895","pred":"source","obj":"BioNLP16_DUT"}]},{"project":"BioNLP16_Messiy","denotations":[{"id":"T486","span":{"begin":127,"end":131},"obj":"Protein"},{"id":"T484","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T485","span":{"begin":23,"end":37},"obj":"Protein"},{"id":"T503","span":{"begin":38,"end":48},"obj":"Gene_expression"},{"id":"T504","span":{"begin":14,"end":22},"obj":"Negative_regulation"}],"relations":[{"id":"R446","pred":"themeOf","subj":"T485","obj":"T503"},{"id":"R458","pred":"themeOf","subj":"T503","obj":"T504"}],"attributes":[{"subj":"T486","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T484","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T485","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T503","pred":"source","obj":"BioNLP16_Messiy"},{"subj":"T504","pred":"source","obj":"BioNLP16_Messiy"}]},{"project":"DLUT931","denotations":[{"id":"T515","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T517","span":{"begin":127,"end":131},"obj":"Protein"},{"id":"T516","span":{"begin":23,"end":37},"obj":"Protein"},{"id":"T534","span":{"begin":38,"end":48},"obj":"Gene_expression"},{"id":"T535","span":{"begin":14,"end":22},"obj":"Negative_regulation"}],"relations":[{"id":"R461","pred":"causeOf","subj":"T515","obj":"T535"},{"id":"R462","pred":"themeOf","subj":"T516","obj":"T534"},{"id":"R473","pred":"themeOf","subj":"T534","obj":"T535"}],"attributes":[{"subj":"T515","pred":"source","obj":"DLUT931"},{"subj":"T517","pred":"source","obj":"DLUT931"},{"subj":"T516","pred":"source","obj":"DLUT931"},{"subj":"T534","pred":"source","obj":"DLUT931"},{"subj":"T535","pred":"source","obj":"DLUT931"}]},{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T868","span":{"begin":14,"end":77},"obj":"Gene_expression"},{"id":"T838","span":{"begin":151,"end":154},"obj":"Protein"},{"id":"T844","span":{"begin":127,"end":131},"obj":"Protein"},{"id":"T843","span":{"begin":14,"end":37},"obj":"Protein"},{"id":"T848","span":{"begin":0,"end":4},"obj":"Protein"}],"relations":[{"id":"R575","pred":"themeOf","subj":"T843","obj":"T868"}],"attributes":[{"subj":"T868","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T838","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T844","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T843","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"},{"subj":"T848","pred":"source","obj":"bionlp-st-ge-2016-test-ihmc"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T573","span":{"begin":0,"end":4},"obj":"NNP"},{"id":"T574","span":{"begin":5,"end":13},"obj":"RB"},{"id":"T575","span":{"begin":14,"end":22},"obj":"NNPS"},{"id":"T576","span":{"begin":23,"end":30},"obj":"NNP"},{"id":"T577","span":{"begin":31,"end":37},"obj":"NNP"},{"id":"T578","span":{"begin":38,"end":48},"obj":"NNP"},{"id":"T579","span":{"begin":49,"end":51},"obj":"IN"},{"id":"T580","span":{"begin":52,"end":62},"obj":"NNP"},{"id":"T581","span":{"begin":63,"end":77},"obj":"NNP"},{"id":"T590","span":{"begin":169,"end":175},"obj":"NN"},{"id":"T589","span":{"begin":155,"end":168},"obj":"NN"},{"id":"T588","span":{"begin":151,"end":154},"obj":"NNPS"},{"id":"T587","span":{"begin":147,"end":150},"obj":"DT"},{"id":"T586","span":{"begin":144,"end":146},"obj":"IN"},{"id":"T585","span":{"begin":137,"end":143},"obj":"NN"},{"id":"T584","span":{"begin":135,"end":136},"obj":"DT"},{"id":"T583","span":{"begin":132,"end":134},"obj":"VBZ"},{"id":"T582","span":{"begin":127,"end":131},"obj":"NNP"}],"relations":[{"id":"R269","pred":"nsubj","subj":"T573","obj":"T575"},{"id":"R270","pred":"advmod","subj":"T574","obj":"T575"},{"id":"R271","pred":"nsubj","subj":"T575","obj":"T583"},{"id":"R272","pred":"compound","subj":"T576","obj":"T578"},{"id":"R273","pred":"compound","subj":"T577","obj":"T578"},{"id":"R274","pred":"nsubj","subj":"T578","obj":"T583"},{"id":"R275","pred":"prep","subj":"T579","obj":"T578"},{"id":"R276","pred":"compound","subj":"T580","obj":"T582"},{"id":"R277","pred":"compound","subj":"T581","obj":"T582"},{"id":"R278","pred":"pobj","subj":"T582","obj":"T579"},{"id":"R279","pred":"ROOT","subj":"T583","obj":"T583"},{"id":"R280","pred":"det","subj":"T584","obj":"T585"},{"id":"R281","pred":"attr","subj":"T585","obj":"T583"},{"id":"R282","pred":"prep","subj":"T586","obj":"T585"},{"id":"R285","pred":"compound","subj":"T589","obj":"T590"}],"attributes":[{"subj":"T573","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T574","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T575","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T576","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T577","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T578","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T579","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T580","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T581","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T590","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T589","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T588","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T587","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T586","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T585","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T584","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T583","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T582","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T198","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T199","span":{"begin":23,"end":37},"obj":"Protein"},{"id":"T200","span":{"begin":38,"end":48},"obj":"Gene_expression"},{"id":"T201","span":{"begin":14,"end":22},"obj":"Negative_regulation"},{"id":"T202","span":{"begin":127,"end":131},"obj":"Protein"}],"relations":[{"id":"R25","pred":"causeOf","subj":"T198","obj":"T201"},{"id":"R26","pred":"themeOf","subj":"T199","obj":"T200"},{"id":"R27","pred":"themeOf","subj":"T200","obj":"T201"}],"attributes":[{"subj":"T198","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T199","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T200","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T201","pred":"source","obj":"bionlp-st-ge-2016-test-tees"},{"subj":"T202","pred":"source","obj":"bionlp-st-ge-2016-test-tees"}]},{"project":"testone","denotations":[{"id":"T22","span":{"begin":127,"end":131},"obj":"Protein"},{"id":"T20","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T21","span":{"begin":23,"end":37},"obj":"Protein"},{"id":"T39","span":{"begin":38,"end":48},"obj":"Gene_expression"}],"relations":[{"id":"R1","pred":"themeOf","subj":"T21","obj":"T39"}],"attributes":[{"subj":"T22","pred":"source","obj":"testone"},{"subj":"T20","pred":"source","obj":"testone"},{"subj":"T21","pred":"source","obj":"testone"},{"subj":"T39","pred":"source","obj":"testone"}]},{"project":"test3","denotations":[{"id":"T47","span":{"begin":127,"end":131},"obj":"Protein"},{"id":"T45","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T46","span":{"begin":23,"end":37},"obj":"Protein"},{"id":"T64","span":{"begin":0,"end":4},"obj":"Protein"},{"id":"T65","span":{"begin":23,"end":37},"obj":"Protein"},{"id":"T66","span":{"begin":38,"end":48},"obj":"Gene_expression"},{"id":"T67","span":{"begin":127,"end":131},"obj":"Protein"}],"relations":[{"id":"R9","pred":"themeOf","subj":"T65","obj":"T66"},{"id":"R10","pred":"themeOf","subj":"T65","obj":"T64"},{"id":"R11","pred":"themeOf","subj":"T66","obj":"T64"}],"attributes":[{"subj":"T47","pred":"source","obj":"test3"},{"subj":"T45","pred":"source","obj":"test3"},{"subj":"T46","pred":"source","obj":"test3"},{"subj":"T64","pred":"source","obj":"test3"},{"subj":"T65","pred":"source","obj":"test3"},{"subj":"T66","pred":"source","obj":"test3"},{"subj":"T67","pred":"source","obj":"test3"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"pmc-enju-pas","color":"#93c9ec","default":true},{"id":"bionlp-st-ge-2016-test-proteins","color":"#e3ec93"},{"id":"bionlp-st-ge-2016-uniprot","color":"#db93ec"},{"id":"GO-BP","color":"#93ecc1"},{"id":"GO-MF","color":"#eca793"},{"id":"sentences","color":"#9399ec"},{"id":"simple1","color":"#b3ec93"},{"id":"BioNLP16_DUT","color":"#ec93cd"},{"id":"BioNLP16_Messiy","color":"#93e7ec"},{"id":"DLUT931","color":"#ecd793"},{"id":"bionlp-st-ge-2016-test-ihmc","color":"#bd93ec"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#93eca3"},{"id":"bionlp-st-ge-2016-test-tees","color":"#ec939c"},{"id":"testone","color":"#93b6ec"},{"id":"test3","color":"#d0ec93"}]}]}}