Id |
Subject |
Object |
Predicate |
Lexical cue |
T23133 |
0-5 |
WRB |
denotes |
where |
T23134 |
9-11 |
VBZ |
denotes |
is |
T23135 |
6-8 |
NN |
denotes |
β0 |
T23136 |
12-15 |
DT |
denotes |
the |
T23137 |
16-25 |
NN |
denotes |
intercept |
T23138 |
25-27 |
, |
denotes |
, |
T23139 |
27-30 |
CC |
denotes |
and |
T23140 |
31-33 |
NN |
denotes |
β1 |
T23141 |
46-55 |
VBP |
denotes |
represent |
T23142 |
33-35 |
, |
denotes |
, |
T23143 |
35-37 |
NN |
denotes |
β2 |
T23144 |
37-39 |
, |
denotes |
, |
T23145 |
39-42 |
CC |
denotes |
and |
T23146 |
43-45 |
NN |
denotes |
β3 |
T23147 |
56-59 |
DT |
denotes |
the |
T23148 |
71-83 |
NNS |
denotes |
coefficients |
T23149 |
60-70 |
NN |
denotes |
regression |
T23150 |
84-86 |
IN |
denotes |
of |
T23151 |
87-92 |
PRP$ |
denotes |
their |
T23152 |
104-109 |
NNS |
denotes |
terms |
T23153 |
93-103 |
JJ |
denotes |
respective |
T23154 |
109-110 |
. |
denotes |
. |
T23155 |
110-214 |
sentence |
denotes |
As before, the parameter “sex*gene” is only retained if it significantly improves the fit of the model. |
T23156 |
111-113 |
IN |
denotes |
As |
T23157 |
155-163 |
VBN |
denotes |
retained |
T23158 |
114-120 |
RB |
denotes |
before |
T23159 |
120-122 |
, |
denotes |
, |
T23160 |
122-125 |
DT |
denotes |
the |
T23161 |
126-135 |
NN |
denotes |
parameter |
T23162 |
136-137 |
`` |
denotes |
“ |
T23163 |
137-140 |
NN |
denotes |
sex |
T23164 |
140-141 |
SYM |
denotes |
* |
T23165 |
141-145 |
NN |
denotes |
gene |
T23166 |
145-146 |
'' |
denotes |
” |
T23167 |
147-149 |
VBZ |
denotes |
is |
T23168 |
150-154 |
RB |
denotes |
only |
T23169 |
164-166 |
IN |
denotes |
if |
T23170 |
184-192 |
VBZ |
denotes |
improves |
T23171 |
167-169 |
PRP |
denotes |
it |
T23172 |
170-183 |
RB |
denotes |
significantly |
T23173 |
193-196 |
DT |
denotes |
the |
T23174 |
197-200 |
NN |
denotes |
fit |
T23175 |
201-203 |
IN |
denotes |
of |
T23176 |
204-207 |
DT |
denotes |
the |
T23177 |
208-213 |
NN |
denotes |
model |
T23178 |
213-214 |
. |
denotes |
. |
T23179 |
214-379 |
sentence |
denotes |
The p-value threshold for significant correlation is calculated by an F test, which compares the appropriate model (Equation 7 or 8) to the null model (Equation 9). |
T23180 |
215-218 |
DT |
denotes |
The |
T23181 |
227-236 |
NN |
denotes |
threshold |
T23182 |
219-220 |
NN |
denotes |
p |
T23183 |
221-226 |
NN |
denotes |
value |
T23184 |
220-221 |
HYPH |
denotes |
- |
T23185 |
268-278 |
VBN |
denotes |
calculated |
T23186 |
237-240 |
IN |
denotes |
for |
T23187 |
241-252 |
JJ |
denotes |
significant |
T23188 |
253-264 |
NN |
denotes |
correlation |
T23189 |
265-267 |
VBZ |
denotes |
is |
T23190 |
279-281 |
IN |
denotes |
by |
T23191 |
282-284 |
DT |
denotes |
an |
T23192 |
287-291 |
NN |
denotes |
test |
T23193 |
285-286 |
NN |
denotes |
F |
T23194 |
291-293 |
, |
denotes |
, |
T23195 |
293-298 |
WDT |
denotes |
which |
T23196 |
299-307 |
VBZ |
denotes |
compares |
T23197 |
308-311 |
DT |
denotes |
the |
T23198 |
324-329 |
NN |
denotes |
model |
T23199 |
312-323 |
JJ |
denotes |
appropriate |
T23200 |
330-331 |
-LRB- |
denotes |
( |
T23201 |
340-341 |
CD |
denotes |
7 |
T23202 |
331-339 |
NN |
denotes |
Equation |
T23203 |
342-344 |
CC |
denotes |
or |
T23204 |
345-346 |
CD |
denotes |
8 |
T23205 |
346-347 |
-RRB- |
denotes |
) |
T23206 |
348-350 |
IN |
denotes |
to |
T23207 |
351-354 |
DT |
denotes |
the |
T23208 |
360-365 |
NN |
denotes |
model |
T23209 |
355-359 |
JJ |
denotes |
null |
T23210 |
366-367 |
-LRB- |
denotes |
( |
T23211 |
367-375 |
NN |
denotes |
Equation |
T23212 |
376-377 |
CD |
denotes |
9 |
T23213 |
377-378 |
-RRB- |
denotes |
) |
T23214 |
378-379 |
. |
denotes |
. |
T23215 |
379-517 |
sentence |
denotes |
As before, multiple testing was addressed with use of the FDR, ranking the p-values obtained from the above F tests and setting α = 0.01. |
T23216 |
380-382 |
IN |
denotes |
As |
T23217 |
412-421 |
VBN |
denotes |
addressed |
T23218 |
383-389 |
RB |
denotes |
before |
T23219 |
389-391 |
, |
denotes |
, |
T23220 |
391-399 |
JJ |
denotes |
multiple |
T23221 |
400-407 |
NN |
denotes |
testing |
T23222 |
408-411 |
VBD |
denotes |
was |
T23223 |
422-426 |
IN |
denotes |
with |
T23224 |
427-430 |
NN |
denotes |
use |
T23225 |
431-433 |
IN |
denotes |
of |
T23226 |
434-437 |
DT |
denotes |
the |
T23227 |
438-441 |
NN |
denotes |
FDR |
T23228 |
441-443 |
, |
denotes |
, |
T23229 |
443-450 |
VBG |
denotes |
ranking |
T23230 |
451-454 |
DT |
denotes |
the |
T23231 |
457-463 |
NNS |
denotes |
values |
T23232 |
455-456 |
NN |
denotes |
p |
T23233 |
456-457 |
HYPH |
denotes |
- |
T23234 |
464-472 |
VBN |
denotes |
obtained |
T23235 |
473-477 |
IN |
denotes |
from |
T23236 |
478-481 |
DT |
denotes |
the |
T23237 |
490-495 |
NNS |
denotes |
tests |
T23238 |
482-487 |
JJ |
denotes |
above |
T23239 |
488-489 |
NN |
denotes |
F |
T23240 |
496-499 |
CC |
denotes |
and |
T23241 |
500-507 |
VBG |
denotes |
setting |
T23242 |
508-509 |
NN |
denotes |
α |
T23243 |
512-516 |
CD |
denotes |
0.01 |
T23244 |
510-511 |
SYM |
denotes |
= |
T23245 |
516-517 |
. |
denotes |
. |
R7299 |
T23133 |
T23134 |
advmod |
where,is |
R7301 |
T23135 |
T23134 |
nsubj |
β0,is |
R7302 |
T23136 |
T23137 |
det |
the,intercept |
R7303 |
T23137 |
T23134 |
attr |
intercept,is |
R7304 |
T23138 |
T23134 |
punct |
", ",is |
R7305 |
T23139 |
T23134 |
cc |
and,is |
R7306 |
T23140 |
T23141 |
nsubj |
β1,represent |
R7307 |
T23141 |
T23134 |
conj |
represent,is |
R7308 |
T23142 |
T23140 |
punct |
", ",β1 |
R7309 |
T23143 |
T23140 |
conj |
β2,β1 |
R7310 |
T23144 |
T23143 |
punct |
", ",β2 |
R7311 |
T23145 |
T23143 |
cc |
and,β2 |
R7312 |
T23146 |
T23143 |
conj |
β3,β2 |
R7313 |
T23147 |
T23148 |
det |
the,coefficients |
R7314 |
T23148 |
T23141 |
dobj |
coefficients,represent |
R7315 |
T23149 |
T23148 |
compound |
regression,coefficients |
R7316 |
T23150 |
T23148 |
prep |
of,coefficients |
R7317 |
T23151 |
T23152 |
poss |
their,terms |
R7318 |
T23152 |
T23150 |
pobj |
terms,of |
R7319 |
T23153 |
T23152 |
amod |
respective,terms |
R7321 |
T23156 |
T23157 |
prep |
As,retained |
R7322 |
T23158 |
T23156 |
pcomp |
before,As |
R7323 |
T23159 |
T23157 |
punct |
", ",retained |
R7324 |
T23160 |
T23161 |
det |
the,parameter |
R7325 |
T23161 |
T23157 |
nsubjpass |
parameter,retained |
R7326 |
T23162 |
T23161 |
punct |
“,parameter |
R7327 |
T23163 |
T23161 |
appos |
sex,parameter |
R7328 |
T23164 |
T23165 |
punct |
*,gene |
R7329 |
T23165 |
T23163 |
prep |
gene,sex |
R7330 |
T23166 |
T23157 |
punct |
”,retained |
R7331 |
T23167 |
T23157 |
auxpass |
is,retained |
R7332 |
T23168 |
T23157 |
advmod |
only,retained |
R7333 |
T23169 |
T23170 |
mark |
if,improves |
R7334 |
T23170 |
T23157 |
advcl |
improves,retained |
R7335 |
T23171 |
T23170 |
nsubj |
it,improves |
R7336 |
T23172 |
T23170 |
advmod |
significantly,improves |
R7337 |
T23173 |
T23174 |
det |
the,fit |
R7338 |
T23174 |
T23170 |
dobj |
fit,improves |
R7339 |
T23175 |
T23174 |
prep |
of,fit |
R7340 |
T23176 |
T23177 |
det |
the,model |
R7341 |
T23177 |
T23175 |
pobj |
model,of |
R7342 |
T23178 |
T23157 |
punct |
.,retained |
R7343 |
T23180 |
T23181 |
det |
The,threshold |
R7344 |
T23181 |
T23185 |
nsubjpass |
threshold,calculated |
R7345 |
T23182 |
T23183 |
compound |
p,value |
R7346 |
T23183 |
T23181 |
compound |
value,threshold |
R7347 |
T23184 |
T23183 |
punct |
-,value |
R7348 |
T23186 |
T23181 |
prep |
for,threshold |
R7349 |
T23187 |
T23188 |
amod |
significant,correlation |
R7350 |
T23188 |
T23186 |
pobj |
correlation,for |
R7351 |
T23189 |
T23185 |
auxpass |
is,calculated |
R7352 |
T23190 |
T23185 |
prep |
by,calculated |
R7353 |
T23191 |
T23192 |
det |
an,test |
R7354 |
T23192 |
T23190 |
pobj |
test,by |
R7355 |
T23193 |
T23192 |
compound |
F,test |
R7356 |
T23194 |
T23192 |
punct |
", ",test |
R7357 |
T23195 |
T23196 |
dep |
which,compares |
R7358 |
T23196 |
T23192 |
relcl |
compares,test |
R7359 |
T23197 |
T23198 |
det |
the,model |
R7360 |
T23198 |
T23196 |
dobj |
model,compares |
R7361 |
T23199 |
T23198 |
amod |
appropriate,model |
R7362 |
T23200 |
T23201 |
punct |
(,7 |
R7363 |
T23201 |
T23198 |
parataxis |
7,model |
R7364 |
T23202 |
T23201 |
nmod |
Equation,7 |
R7365 |
T23203 |
T23201 |
cc |
or,7 |
R7366 |
T23204 |
T23201 |
conj |
8,7 |
R7367 |
T23205 |
T23201 |
punct |
),7 |
R7368 |
T23206 |
T23196 |
prep |
to,compares |
R7369 |
T23207 |
T23208 |
det |
the,model |
R7370 |
T23208 |
T23206 |
pobj |
model,to |
R7371 |
T23209 |
T23208 |
amod |
null,model |
R7372 |
T23210 |
T23211 |
punct |
(,Equation |
R7373 |
T23211 |
T23208 |
parataxis |
Equation,model |
R7374 |
T23212 |
T23211 |
nummod |
9,Equation |
R7375 |
T23213 |
T23211 |
punct |
),Equation |
R7376 |
T23214 |
T23185 |
punct |
.,calculated |
R7377 |
T23216 |
T23217 |
prep |
As,addressed |
R7378 |
T23218 |
T23216 |
pcomp |
before,As |
R7379 |
T23219 |
T23217 |
punct |
", ",addressed |
R7380 |
T23220 |
T23221 |
amod |
multiple,testing |
R7381 |
T23221 |
T23217 |
nsubjpass |
testing,addressed |
R7382 |
T23222 |
T23217 |
auxpass |
was,addressed |
R7383 |
T23223 |
T23217 |
prep |
with,addressed |
R7384 |
T23224 |
T23223 |
pobj |
use,with |
R7385 |
T23225 |
T23224 |
prep |
of,use |
R7386 |
T23226 |
T23227 |
det |
the,FDR |
R7387 |
T23227 |
T23225 |
pobj |
FDR,of |
R7388 |
T23228 |
T23217 |
punct |
", ",addressed |
R7389 |
T23229 |
T23217 |
advcl |
ranking,addressed |
R7390 |
T23230 |
T23231 |
det |
the,values |
R7391 |
T23231 |
T23229 |
dobj |
values,ranking |
R7392 |
T23232 |
T23231 |
compound |
p,values |
R7393 |
T23233 |
T23231 |
punct |
-,values |
R7394 |
T23234 |
T23231 |
acl |
obtained,values |
R7395 |
T23235 |
T23234 |
prep |
from,obtained |
R7396 |
T23236 |
T23237 |
det |
the,tests |
R7397 |
T23237 |
T23235 |
pobj |
tests,from |
R7398 |
T23238 |
T23237 |
amod |
above,tests |
R7399 |
T23239 |
T23237 |
compound |
F,tests |
R7400 |
T23240 |
T23229 |
cc |
and,ranking |
R7401 |
T23241 |
T23229 |
conj |
setting,ranking |
R7402 |
T23242 |
T23243 |
nsubj |
α,0.01 |
R7403 |
T23243 |
T23241 |
ccomp |
0.01,setting |
R7404 |
T23244 |
T23243 |
punct |
=,0.01 |
R7405 |
T23245 |
T23217 |
punct |
.,addressed |