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PMC:1359071 / 37836-38569 JSONTXT

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craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T17553 9-13 PR:000004155 denotes ApoE
T17554 21-25 PR:000004155 denotes ApoE
T17555 113-117 PR:000004155 denotes ApoE
T17556 126-130 PR:000004155 denotes ApoE
T17557 169-173 PR:000004155 denotes ApoE
T17558 208-212 NCBITaxon:10088 denotes mice
T17559 269-273 PR:000004155 denotes ApoE
T17560 285-289 PR:000004155 denotes ApoE
T17561 301-305 NCBITaxon:10088 denotes mice
T17562 349-353 NCBITaxon:10088 denotes mice
T17563 370-374 NCBITaxon:10088 denotes mice
T17564 417-421 NCBITaxon:10088 denotes mice
T17565 427-430 GO:0007631 denotes fed
T17566 438-442 CHEBI:33290 denotes Chow
T17567 549-560 CHEBI:16113 denotes cholesterol
T17568 572-576 NCBITaxon:10088 denotes Mice
T17569 613-618 GO:0016265 denotes death
T17570 620-626 UBERON:0002107 denotes livers
T17571 681-683 CHEBI:17997 denotes N2
T17572 689-705 UBERON:0003428 denotes gonadal fat pads

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T17575 9-13 PR_EXT:000004155 denotes ApoE
T17576 13-14 SO_EXT:sequence_nullness_or_absence denotes −
T17577 15-16 SO_EXT:sequence_nullness_or_absence denotes −
T17578 21-25 PR_EXT:000004155 denotes ApoE
T17579 25-26 SO_EXT:sequence_nullness_or_absence denotes −
T17580 27-28 SO_EXT:sequence_nullness_or_absence denotes −
T17581 113-117 PR_EXT:000004155 denotes ApoE
T17582 117-118 SO_EXT:sequence_nullness_or_absence denotes −
T17583 119-120 SO_EXT:sequence_nullness_or_absence denotes −
T17584 126-130 PR_EXT:000004155 denotes ApoE
T17585 130-131 SO_EXT:sequence_nullness_or_absence denotes −
T17586 132-133 SO_EXT:sequence_nullness_or_absence denotes −
T17587 169-173 PR_EXT:000004155 denotes ApoE
T17588 173-174 SO_EXT:sequence_nullness_or_absence denotes −
T17589 175-176 SO_EXT:sequence_nullness_or_absence denotes −
T17590 208-212 NCBITaxon:10088 denotes mice
T17591 269-273 PR_EXT:000004155 denotes ApoE
T17592 273-274 SO_EXT:sequence_nullness_or_absence denotes −
T17593 275-276 SO_EXT:sequence_nullness_or_absence denotes −
T17594 285-289 PR_EXT:000004155 denotes ApoE
T17595 289-290 SO_EXT:sequence_nullness_or_absence denotes −
T17596 291-292 SO_EXT:sequence_nullness_or_absence denotes −
T17597 301-305 NCBITaxon:10088 denotes mice
T17598 324-328 GO_EXT:breeding denotes bred
T17599 349-353 NCBITaxon:10088 denotes mice
T17600 370-374 NCBITaxon:10088 denotes mice
T17601 380-386 PATO_UBERON_EXT:female_or_bearer_of_femaleness denotes female
T17602 392-396 PATO_UBERON_EXT:male_or_bearer_of_maleness denotes male
T17603 417-421 NCBITaxon:10088 denotes mice
T17604 427-430 GO:0007631 denotes fed
T17605 438-442 CHEBI_EXT:33290 denotes Chow
T17606 457-460 CHEBI_UBERON_EXT:triglyceride_or_adipose_tissue denotes fat
T17607 535-538 CHEBI_UBERON_EXT:triglyceride_or_adipose_tissue denotes fat
T17608 549-560 CHEBI:16113 denotes cholesterol
T17609 572-576 NCBITaxon:10088 denotes Mice
T17610 582-592 GO_EXT:killing denotes sacrificed
T17611 613-618 GO:0016265 denotes death
T17612 620-626 UBERON:0002107 denotes livers
T17613 681-683 CHEBI:17997 denotes N2
T17614 689-705 UBERON:0003428 denotes gonadal fat pads
T17615 697-700 CHEBI_UBERON_EXT:triglyceride_or_adipose_tissue denotes fat

craft-sa-dev

Id Subject Object Predicate Lexical cue
T17622 0-5 NN denotes C57BL
T17623 6-8 NN denotes 6J
T17624 5-6 HYPH denotes /
T17625 9-13 NN denotes ApoE
T17626 35-44 VBN denotes purchased
T17627 13-14 SYM denotes −
T17628 14-15 HYPH denotes /
T17629 15-16 SYM denotes −
T17630 17-18 -LRB- denotes (
T17631 18-25 NN denotes B6.ApoE
T17632 25-26 SYM denotes −
T17633 26-27 HYPH denotes /
T17634 27-28 SYM denotes −
T17635 28-29 -RRB- denotes )
T17636 30-34 VBD denotes were
T17637 45-49 IN denotes from
T17638 50-57 NNP denotes Jackson
T17639 58-68 NNP denotes Laboratory
T17640 69-70 -LRB- denotes (
T17641 74-80 NNP denotes Harbor
T17642 70-73 NNP denotes Bar
T17643 80-82 , denotes ,
T17644 82-87 NNP denotes Maine
T17645 87-89 , denotes ,
T17646 89-95 NNP denotes United
T17647 96-102 NNP denotes States
T17648 102-103 -RRB- denotes )
T17649 103-104 . denotes .
T17650 104-204 sentence denotes C3H/HeJ ApoE−/− (C3H.ApoE−/−) were generated by backcrossing B6.ApoE−/− to C3H for ten generations.
T17651 105-108 NN denotes C3H
T17652 109-112 NN denotes HeJ
T17653 108-109 HYPH denotes /
T17654 113-117 NN denotes ApoE
T17655 140-149 VBN denotes generated
T17656 117-118 SYM denotes −
T17657 118-119 HYPH denotes /
T17658 119-120 SYM denotes −
T17659 121-122 -LRB- denotes (
T17660 122-130 NN denotes C3H.ApoE
T17661 130-131 SYM denotes −
T17662 131-132 HYPH denotes /
T17663 132-133 SYM denotes −
T17664 133-134 -RRB- denotes )
T17665 135-139 VBD denotes were
T17666 150-152 IN denotes by
T17667 153-165 VBG denotes backcrossing
T17668 166-173 NN denotes B6.ApoE
T17669 173-174 SYM denotes −
T17670 174-175 HYPH denotes /
T17671 175-176 SYM denotes −
T17672 177-179 IN denotes to
T17673 180-183 NN denotes C3H
T17674 184-187 IN denotes for
T17675 188-191 CD denotes ten
T17676 192-203 NNS denotes generations
T17677 203-204 . denotes .
T17678 204-354 sentence denotes F1 mice were generated from reciprocal intercrossing between B6.ApoE−/− and C3H.ApoE−/−, and F2 mice were subsequently bred by intercrossing F1 mice.
T17679 205-207 NN denotes F1
T17680 208-212 NNS denotes mice
T17681 218-227 VBN denotes generated
T17682 213-217 VBD denotes were
T17683 228-232 IN denotes from
T17684 233-243 JJ denotes reciprocal
T17685 244-257 NN denotes intercrossing
T17686 258-265 IN denotes between
T17687 266-273 NN denotes B6.ApoE
T17688 273-274 SYM denotes −
T17689 274-275 HYPH denotes /
T17690 275-276 SYM denotes −
T17691 277-280 CC denotes and
T17692 281-289 NN denotes C3H.ApoE
T17693 289-290 SYM denotes −
T17694 290-291 HYPH denotes /
T17695 291-292 SYM denotes −
T17696 292-294 , denotes ,
T17697 294-297 CC denotes and
T17698 298-300 NN denotes F2
T17699 301-305 NNS denotes mice
T17700 324-328 VBN denotes bred
T17701 306-310 VBD denotes were
T17702 311-323 RB denotes subsequently
T17703 329-331 IN denotes by
T17704 332-345 VBG denotes intercrossing
T17705 346-348 NN denotes F1
T17706 349-353 NNS denotes mice
T17707 353-354 . denotes .
T17708 354-412 sentence denotes A total of 334 mice (169 female, 165 male) were produced.
T17709 355-356 DT denotes A
T17710 357-362 NN denotes total
T17711 403-411 VBN denotes produced
T17712 363-365 IN denotes of
T17713 366-369 CD denotes 334
T17714 370-374 NNS denotes mice
T17715 375-376 -LRB- denotes (
T17716 376-379 CD denotes 169
T17717 380-386 JJ denotes female
T17718 386-388 , denotes ,
T17719 388-391 CD denotes 165
T17720 392-396 JJ denotes male
T17721 396-397 -RRB- denotes )
T17722 398-402 VBD denotes were
T17723 411-412 . denotes .
T17724 412-571 sentence denotes All mice were fed Purina Chow containing 4% fat until 8 wk of age and then transferred to a “Western” diet containing 42% fat and 0.15% cholesterol for 16 wk.
T17725 413-416 DT denotes All
T17726 417-421 NNS denotes mice
T17727 427-430 VBN denotes fed
T17728 422-426 VBD denotes were
T17729 431-437 NNP denotes Purina
T17730 438-442 NNP denotes Chow
T17731 443-453 VBG denotes containing
T17732 454-455 CD denotes 4
T17733 455-456 NN denotes %
T17734 457-460 NN denotes fat
T17735 461-466 IN denotes until
T17736 467-468 CD denotes 8
T17737 469-471 NN denotes wk
T17738 472-474 IN denotes of
T17739 475-478 NN denotes age
T17740 479-482 CC denotes and
T17741 483-487 RB denotes then
T17742 488-499 VBN denotes transferred
T17743 500-502 IN denotes to
T17744 503-504 DT denotes a
T17745 515-519 NN denotes diet
T17746 505-506 `` denotes “
T17747 506-513 NNP denotes Western
T17748 513-514 '' denotes ”
T17749 520-530 VBG denotes containing
T17750 531-533 CD denotes 42
T17751 533-534 NN denotes %
T17752 535-538 NN denotes fat
T17753 539-542 CC denotes and
T17754 543-547 CD denotes 0.15
T17755 547-548 NN denotes %
T17756 549-560 NN denotes cholesterol
T17757 561-564 IN denotes for
T17758 565-567 CD denotes 16
T17759 568-570 NN denotes wk
T17760 570-571 . denotes .
T17761 571-609 sentence denotes Mice were sacrificed at 24 wk of age.
T17762 572-576 NNS denotes Mice
T17763 582-592 VBN denotes sacrificed
T17764 577-581 VBD denotes were
T17765 593-595 IN denotes at
T17766 596-598 CD denotes 24
T17767 599-601 NN denotes wk
T17768 602-604 IN denotes of
T17769 605-608 NN denotes age
T17770 608-609 . denotes .
T17771 609-733 sentence denotes At death, livers were immediately collected and flash-frozen in liquid N2, and gonadal fat pads were extracted and weighed.
T17772 610-612 IN denotes At
T17773 644-653 VBN denotes collected
T17774 613-618 NN denotes death
T17775 618-620 , denotes ,
T17776 620-626 NNS denotes livers
T17777 627-631 VBD denotes were
T17778 632-643 RB denotes immediately
T17779 654-657 CC denotes and
T17780 658-663 NN denotes flash
T17781 664-670 VBN denotes frozen
T17782 663-664 HYPH denotes -
T17783 671-673 IN denotes in
T17784 674-680 NN denotes liquid
T17785 681-683 NN denotes N2
T17786 683-685 , denotes ,
T17787 685-688 CC denotes and
T17788 689-696 JJ denotes gonadal
T17789 701-705 NNS denotes pads
T17790 697-700 NN denotes fat
T17791 711-720 VBN denotes extracted
T17792 706-710 VBD denotes were
T17793 721-724 CC denotes and
T17794 725-732 VBN denotes weighed
T17795 732-733 . denotes .
R5541 T17622 T17623 compound C57BL,6J
R5542 T17623 T17625 compound 6J,ApoE
R5543 T17624 T17623 punct /,6J
R5544 T17625 T17626 nsubjpass ApoE,purchased
R5545 T17627 T17625 punct −,ApoE
R5546 T17628 T17625 punct /,ApoE
R5547 T17629 T17625 punct −,ApoE
R5548 T17630 T17625 punct (,ApoE
R5549 T17631 T17625 appos B6.ApoE,ApoE
R5550 T17632 T17631 punct −,B6.ApoE
R5551 T17633 T17631 punct /,B6.ApoE
R5552 T17634 T17631 punct −,B6.ApoE
R5553 T17635 T17626 punct ),purchased
R5554 T17636 T17626 auxpass were,purchased
R5555 T17637 T17626 prep from,purchased
R5556 T17638 T17639 compound Jackson,Laboratory
R5557 T17639 T17637 pobj Laboratory,from
R5558 T17640 T17641 punct (,Harbor
R5559 T17641 T17639 parataxis Harbor,Laboratory
R5560 T17642 T17641 compound Bar,Harbor
R5561 T17643 T17641 punct ", ",Harbor
R5562 T17644 T17641 npadvmod Maine,Harbor
R5563 T17645 T17641 punct ", ",Harbor
R5564 T17646 T17647 compound United,States
R5565 T17647 T17641 npadvmod States,Harbor
R5566 T17648 T17641 punct ),Harbor
R5567 T17649 T17626 punct .,purchased
R5568 T17651 T17652 compound C3H,HeJ
R5569 T17652 T17654 compound HeJ,ApoE
R5570 T17653 T17652 punct /,HeJ
R5571 T17654 T17655 nsubjpass ApoE,generated
R5572 T17656 T17654 punct −,ApoE
R5573 T17657 T17654 punct /,ApoE
R5574 T17658 T17654 punct −,ApoE
R5575 T17659 T17654 punct (,ApoE
R5576 T17660 T17654 appos C3H.ApoE,ApoE
R5577 T17661 T17660 punct −,C3H.ApoE
R5578 T17662 T17660 punct /,C3H.ApoE
R5579 T17663 T17660 punct −,C3H.ApoE
R5580 T17664 T17655 punct ),generated
R5581 T17665 T17655 auxpass were,generated
R5582 T17666 T17655 prep by,generated
R5583 T17667 T17666 pcomp backcrossing,by
R5584 T17668 T17667 dobj B6.ApoE,backcrossing
R5585 T17669 T17668 punct −,B6.ApoE
R5586 T17670 T17668 punct /,B6.ApoE
R5587 T17671 T17668 punct −,B6.ApoE
R5588 T17672 T17667 prep to,backcrossing
R5589 T17673 T17672 pobj C3H,to
R5590 T17674 T17667 prep for,backcrossing
R5591 T17675 T17676 nummod ten,generations
R5592 T17676 T17674 pobj generations,for
R5593 T17677 T17655 punct .,generated
R5594 T17679 T17680 compound F1,mice
R5595 T17680 T17681 nsubjpass mice,generated
R5596 T17682 T17681 auxpass were,generated
R5597 T17683 T17681 prep from,generated
R5598 T17684 T17685 amod reciprocal,intercrossing
R5599 T17685 T17683 pobj intercrossing,from
R5600 T17686 T17685 prep between,intercrossing
R5601 T17687 T17686 pobj B6.ApoE,between
R5602 T17688 T17687 punct −,B6.ApoE
R5603 T17689 T17687 punct /,B6.ApoE
R5604 T17690 T17687 punct −,B6.ApoE
R5605 T17691 T17687 cc and,B6.ApoE
R5606 T17692 T17687 conj C3H.ApoE,B6.ApoE
R5607 T17693 T17692 punct −,C3H.ApoE
R5608 T17694 T17692 punct /,C3H.ApoE
R5609 T17695 T17692 punct −,C3H.ApoE
R5610 T17696 T17681 punct ", ",generated
R5611 T17697 T17681 cc and,generated
R5612 T17698 T17699 compound F2,mice
R5613 T17699 T17700 nsubjpass mice,bred
R5614 T17700 T17681 conj bred,generated
R5615 T17701 T17700 auxpass were,bred
R5616 T17702 T17700 advmod subsequently,bred
R5617 T17703 T17700 prep by,bred
R5618 T17704 T17703 pcomp intercrossing,by
R5619 T17705 T17706 compound F1,mice
R5620 T17706 T17704 dobj mice,intercrossing
R5621 T17707 T17700 punct .,bred
R5622 T17709 T17710 det A,total
R5623 T17710 T17711 nsubjpass total,produced
R5624 T17712 T17710 prep of,total
R5625 T17713 T17714 nummod 334,mice
R5626 T17714 T17712 pobj mice,of
R5627 T17715 T17714 punct (,mice
R5628 T17716 T17714 appos 169,mice
R5629 T17717 T17716 amod female,169
R5630 T17718 T17716 punct ", ",169
R5631 T17719 T17716 appos 165,169
R5632 T17720 T17719 amod male,165
R5633 T17721 T17711 punct ),produced
R5634 T17722 T17711 auxpass were,produced
R5635 T17723 T17711 punct .,produced
R5636 T17725 T17726 det All,mice
R5637 T17726 T17727 nsubjpass mice,fed
R5638 T17728 T17727 auxpass were,fed
R5639 T17729 T17730 compound Purina,Chow
R5640 T17730 T17727 dobj Chow,fed
R5641 T17731 T17730 acl containing,Chow
R5642 T17732 T17733 nummod 4,%
R5643 T17733 T17734 compound %,fat
R5644 T17734 T17731 dobj fat,containing
R5645 T17735 T17727 prep until,fed
R5646 T17736 T17737 nummod 8,wk
R5647 T17737 T17735 pobj wk,until
R5648 T17738 T17737 prep of,wk
R5649 T17739 T17738 pobj age,of
R5650 T17740 T17727 cc and,fed
R5651 T17741 T17742 advmod then,transferred
R5652 T17742 T17727 conj transferred,fed
R5653 T17743 T17742 prep to,transferred
R5654 T17744 T17745 det a,diet
R5655 T17745 T17743 pobj diet,to
R5656 T17746 T17745 punct “,diet
R5657 T17747 T17745 nmod Western,diet
R5658 T17748 T17745 punct ”,diet
R5659 T17749 T17745 acl containing,diet
R5660 T17750 T17751 nummod 42,%
R5661 T17751 T17752 compound %,fat
R5662 T17752 T17749 dobj fat,containing
R5663 T17753 T17752 cc and,fat
R5664 T17754 T17755 nummod 0.15,%
R5665 T17755 T17756 compound %,cholesterol
R5666 T17756 T17752 conj cholesterol,fat
R5667 T17757 T17742 prep for,transferred
R5668 T17758 T17759 nummod 16,wk
R5669 T17759 T17757 pobj wk,for
R5670 T17760 T17727 punct .,fed
R5671 T17762 T17763 nsubjpass Mice,sacrificed
R5672 T17764 T17763 auxpass were,sacrificed
R5673 T17765 T17763 prep at,sacrificed
R5674 T17766 T17767 nummod 24,wk
R5675 T17767 T17765 pobj wk,at
R5676 T17768 T17767 prep of,wk
R5677 T17769 T17768 pobj age,of
R5678 T17770 T17763 punct .,sacrificed
R5679 T17772 T17773 prep At,collected
R5680 T17774 T17772 pobj death,At
R5681 T17775 T17773 punct ", ",collected
R5682 T17776 T17773 nsubjpass livers,collected
R5683 T17777 T17773 auxpass were,collected
R5684 T17778 T17773 advmod immediately,collected
R5685 T17779 T17773 cc and,collected
R5686 T17780 T17781 dep flash,frozen
R5687 T17781 T17773 conj frozen,collected
R5688 T17782 T17781 punct -,frozen
R5689 T17783 T17781 prep in,frozen
R5690 T17784 T17785 compound liquid,N2
R5691 T17785 T17783 pobj N2,in
R5692 T17786 T17773 punct ", ",collected
R5693 T17787 T17773 cc and,collected
R5694 T17788 T17789 amod gonadal,pads
R5695 T17789 T17791 nsubjpass pads,extracted
R5696 T17790 T17789 compound fat,pads
R5697 T17791 T17773 conj extracted,collected
R5698 T17792 T17791 auxpass were,extracted
R5699 T17793 T17791 cc and,extracted
R5700 T17794 T17791 conj weighed,extracted
R5701 T17795 T17773 punct .,collected