PMC:1359071 / 24275-25160
Annnotations
craft-ca-core-dev
{"project":"craft-ca-core-dev","denotations":[{"id":"T10360","span":{"begin":85,"end":91},"obj":"SO:0001026"},{"id":"T10361","span":{"begin":245,"end":251},"obj":"SO:0001026"},{"id":"T10362","span":{"begin":309,"end":314},"obj":"UBERON:0002107"},{"id":"T10363","span":{"begin":463,"end":469},"obj":"SO:0001026"},{"id":"T10364","span":{"begin":538,"end":549},"obj":"SO:0000673"},{"id":"T10365","span":{"begin":570,"end":577},"obj":"UBERON:0000991"},{"id":"T10366","span":{"begin":741,"end":748},"obj":"SO:0000704"},{"id":"T10367","span":{"begin":749,"end":759},"obj":"GO:0065007"},{"id":"T10368","span":{"begin":824,"end":829},"obj":"UBERON:0002107"},{"id":"T10369","span":{"begin":830,"end":834},"obj":"SO:0000704"},{"id":"T10370","span":{"begin":830,"end":845},"obj":"GO:0010467"}],"text":"To assess this, we first determined the distribution of these 1,478 eQTLs across the genome in 2-cM bins as shown in Figure 5C. In order to see if there exist any hotspots for these eQTLs, we tested eQTLs with p \u003c 0.001 for enrichment along the genome in overlapping 2-cM bins against the distribution of all liver eQTLs (Figure 4A) using a Fisher exact test. Figure 5D shows the significance of enrichment reported as −log10 of the enrichment p-value across the genome. One locus on Chromosome 19 was significantly enriched for eQTLs of transcripts correlated with the gonadal fat mass trait. As anticipated, there was an overlap of a correlated eQTL hotspot and a fat mass cQTL, specifically Chromosome 19 at 40 cM. This suggests that the genetic regulation of fat mass for the Chromosome 19 locus is more closely tied to liver gene expression than are the other four fat mass cQTLs."}
craft-ca-core-ex-dev
{"project":"craft-ca-core-ex-dev","denotations":[{"id":"T10464","span":{"begin":85,"end":91},"obj":"SO_EXT:0001026"},{"id":"T10465","span":{"begin":245,"end":251},"obj":"SO_EXT:0001026"},{"id":"T10466","span":{"begin":309,"end":314},"obj":"UBERON:0002107"},{"id":"T10467","span":{"begin":463,"end":469},"obj":"SO_EXT:0001026"},{"id":"T10468","span":{"begin":475,"end":494},"obj":"GO_SO_EXT:chromosomal_part_or_position_or_region_or_site"},{"id":"T10469","span":{"begin":538,"end":549},"obj":"SO_EXT:0000673"},{"id":"T10470","span":{"begin":570,"end":577},"obj":"UBERON:0000991"},{"id":"T10471","span":{"begin":578,"end":581},"obj":"CHEBI_UBERON_EXT:triglyceride_or_adipose_tissue"},{"id":"T10472","span":{"begin":666,"end":669},"obj":"CHEBI_UBERON_EXT:triglyceride_or_adipose_tissue"},{"id":"T10473","span":{"begin":694,"end":704},"obj":"GO_SO_EXT:chromosome"},{"id":"T10474","span":{"begin":741,"end":748},"obj":"SO_EXT:0000704"},{"id":"T10475","span":{"begin":749,"end":759},"obj":"GO:0065007"},{"id":"T10476","span":{"begin":763,"end":766},"obj":"CHEBI_UBERON_EXT:triglyceride_or_adipose_tissue"},{"id":"T10477","span":{"begin":780,"end":790},"obj":"_FRAGMENT"},{"id":"T10478","span":{"begin":794,"end":799},"obj":"GO_SO_EXT:chromosomal_part_or_position_or_region_or_site"},{"id":"T10479","span":{"begin":824,"end":829},"obj":"UBERON:0002107"},{"id":"T10480","span":{"begin":830,"end":834},"obj":"SO_EXT:0000704"},{"id":"T10481","span":{"begin":830,"end":845},"obj":"GO:0010467"},{"id":"T10482","span":{"begin":870,"end":873},"obj":"CHEBI_UBERON_EXT:triglyceride_or_adipose_tissue"}],"relations":[{"id":"R2794","pred":"_lexicallyChainedTo","subj":"T10478","obj":"T10477"}],"text":"To assess this, we first determined the distribution of these 1,478 eQTLs across the genome in 2-cM bins as shown in Figure 5C. In order to see if there exist any hotspots for these eQTLs, we tested eQTLs with p \u003c 0.001 for enrichment along the genome in overlapping 2-cM bins against the distribution of all liver eQTLs (Figure 4A) using a Fisher exact test. Figure 5D shows the significance of enrichment reported as −log10 of the enrichment p-value across the genome. One locus on Chromosome 19 was significantly enriched for eQTLs of transcripts correlated with the gonadal fat mass trait. As anticipated, there was an overlap of a correlated eQTL hotspot and a fat mass cQTL, specifically Chromosome 19 at 40 cM. This suggests that the genetic regulation of fat mass for the Chromosome 19 locus is more closely tied to liver gene expression than are the other four fat mass cQTLs."}
craft-sa-dev
{"project":"craft-sa-dev","denotations":[{"id":"T11125","span":{"begin":0,"end":2},"obj":"TO"},{"id":"T11126","span":{"begin":3,"end":9},"obj":"VB"},{"id":"T11127","span":{"begin":25,"end":35},"obj":"VBD"},{"id":"T11128","span":{"begin":10,"end":14},"obj":"DT"},{"id":"T11129","span":{"begin":14,"end":16},"obj":","},{"id":"T11130","span":{"begin":16,"end":18},"obj":"PRP"},{"id":"T11131","span":{"begin":19,"end":24},"obj":"RB"},{"id":"T11132","span":{"begin":36,"end":39},"obj":"DT"},{"id":"T11133","span":{"begin":40,"end":52},"obj":"NN"},{"id":"T11134","span":{"begin":53,"end":55},"obj":"IN"},{"id":"T11135","span":{"begin":56,"end":61},"obj":"DT"},{"id":"T11136","span":{"begin":68,"end":73},"obj":"NNS"},{"id":"T11137","span":{"begin":62,"end":67},"obj":"CD"},{"id":"T11138","span":{"begin":74,"end":80},"obj":"IN"},{"id":"T11139","span":{"begin":81,"end":84},"obj":"DT"},{"id":"T11140","span":{"begin":85,"end":91},"obj":"NN"},{"id":"T11141","span":{"begin":92,"end":94},"obj":"IN"},{"id":"T11142","span":{"begin":95,"end":96},"obj":"CD"},{"id":"T11143","span":{"begin":97,"end":99},"obj":"NN"},{"id":"T11144","span":{"begin":96,"end":97},"obj":"HYPH"},{"id":"T11145","span":{"begin":100,"end":104},"obj":"NNS"},{"id":"T11146","span":{"begin":105,"end":107},"obj":"IN"},{"id":"T11147","span":{"begin":108,"end":113},"obj":"VBN"},{"id":"T11148","span":{"begin":114,"end":116},"obj":"IN"},{"id":"T11149","span":{"begin":117,"end":123},"obj":"NN"},{"id":"T11150","span":{"begin":124,"end":126},"obj":"NN"},{"id":"T11151","span":{"begin":126,"end":127},"obj":"."},{"id":"T11152","span":{"begin":127,"end":359},"obj":"sentence"},{"id":"T11153","span":{"begin":128,"end":130},"obj":"IN"},{"id":"T11154","span":{"begin":192,"end":198},"obj":"VBD"},{"id":"T11155","span":{"begin":131,"end":136},"obj":"NN"},{"id":"T11156","span":{"begin":137,"end":139},"obj":"TO"},{"id":"T11157","span":{"begin":140,"end":143},"obj":"VB"},{"id":"T11158","span":{"begin":144,"end":146},"obj":"IN"},{"id":"T11159","span":{"begin":153,"end":158},"obj":"VBP"},{"id":"T11160","span":{"begin":147,"end":152},"obj":"EX"},{"id":"T11161","span":{"begin":159,"end":162},"obj":"DT"},{"id":"T11162","span":{"begin":163,"end":171},"obj":"NNS"},{"id":"T11163","span":{"begin":172,"end":175},"obj":"IN"},{"id":"T11164","span":{"begin":176,"end":181},"obj":"DT"},{"id":"T11165","span":{"begin":182,"end":187},"obj":"NNS"},{"id":"T11166","span":{"begin":187,"end":189},"obj":","},{"id":"T11167","span":{"begin":189,"end":191},"obj":"PRP"},{"id":"T11168","span":{"begin":199,"end":204},"obj":"NNS"},{"id":"T11169","span":{"begin":205,"end":209},"obj":"IN"},{"id":"T11170","span":{"begin":210,"end":211},"obj":"NN"},{"id":"T11171","span":{"begin":212,"end":213},"obj":"SYM"},{"id":"T11172","span":{"begin":214,"end":219},"obj":"CD"},{"id":"T11173","span":{"begin":220,"end":223},"obj":"IN"},{"id":"T11174","span":{"begin":224,"end":234},"obj":"NN"},{"id":"T11175","span":{"begin":235,"end":240},"obj":"IN"},{"id":"T11176","span":{"begin":241,"end":244},"obj":"DT"},{"id":"T11177","span":{"begin":245,"end":251},"obj":"NN"},{"id":"T11178","span":{"begin":252,"end":254},"obj":"IN"},{"id":"T11179","span":{"begin":255,"end":266},"obj":"VBG"},{"id":"T11180","span":{"begin":272,"end":276},"obj":"NNS"},{"id":"T11181","span":{"begin":267,"end":268},"obj":"CD"},{"id":"T11182","span":{"begin":269,"end":271},"obj":"NN"},{"id":"T11183","span":{"begin":268,"end":269},"obj":"HYPH"},{"id":"T11184","span":{"begin":277,"end":284},"obj":"IN"},{"id":"T11185","span":{"begin":285,"end":288},"obj":"DT"},{"id":"T11186","span":{"begin":289,"end":301},"obj":"NN"},{"id":"T11187","span":{"begin":302,"end":304},"obj":"IN"},{"id":"T11188","span":{"begin":305,"end":308},"obj":"DT"},{"id":"T11189","span":{"begin":315,"end":320},"obj":"NNS"},{"id":"T11190","span":{"begin":309,"end":314},"obj":"NN"},{"id":"T11191","span":{"begin":321,"end":322},"obj":"-LRB-"},{"id":"T11192","span":{"begin":329,"end":331},"obj":"NN"},{"id":"T11193","span":{"begin":322,"end":328},"obj":"NN"},{"id":"T11194","span":{"begin":331,"end":332},"obj":"-RRB-"},{"id":"T11195","span":{"begin":333,"end":338},"obj":"VBG"},{"id":"T11196","span":{"begin":339,"end":340},"obj":"DT"},{"id":"T11197","span":{"begin":354,"end":358},"obj":"NN"},{"id":"T11198","span":{"begin":341,"end":347},"obj":"NNP"},{"id":"T11199","span":{"begin":348,"end":353},"obj":"JJ"},{"id":"T11200","span":{"begin":358,"end":359},"obj":"."},{"id":"T11201","span":{"begin":359,"end":470},"obj":"sentence"},{"id":"T11202","span":{"begin":360,"end":366},"obj":"NN"},{"id":"T11203","span":{"begin":367,"end":369},"obj":"NN"},{"id":"T11204","span":{"begin":370,"end":375},"obj":"VBZ"},{"id":"T11205","span":{"begin":376,"end":379},"obj":"DT"},{"id":"T11206","span":{"begin":380,"end":392},"obj":"NN"},{"id":"T11207","span":{"begin":393,"end":395},"obj":"IN"},{"id":"T11208","span":{"begin":396,"end":406},"obj":"NN"},{"id":"T11209","span":{"begin":407,"end":415},"obj":"VBN"},{"id":"T11210","span":{"begin":416,"end":418},"obj":"IN"},{"id":"T11211","span":{"begin":419,"end":420},"obj":"HYPH"},{"id":"T11212","span":{"begin":420,"end":425},"obj":"NN"},{"id":"T11213","span":{"begin":426,"end":428},"obj":"IN"},{"id":"T11214","span":{"begin":429,"end":432},"obj":"DT"},{"id":"T11215","span":{"begin":446,"end":451},"obj":"NN"},{"id":"T11216","span":{"begin":433,"end":443},"obj":"NN"},{"id":"T11217","span":{"begin":444,"end":445},"obj":"NN"},{"id":"T11218","span":{"begin":445,"end":446},"obj":"HYPH"},{"id":"T11219","span":{"begin":452,"end":458},"obj":"IN"},{"id":"T11220","span":{"begin":459,"end":462},"obj":"DT"},{"id":"T11221","span":{"begin":463,"end":469},"obj":"NN"},{"id":"T11222","span":{"begin":469,"end":470},"obj":"."},{"id":"T11223","span":{"begin":470,"end":593},"obj":"sentence"},{"id":"T11224","span":{"begin":471,"end":474},"obj":"CD"},{"id":"T11225","span":{"begin":475,"end":480},"obj":"NN"},{"id":"T11226","span":{"begin":516,"end":524},"obj":"VBN"},{"id":"T11227","span":{"begin":481,"end":483},"obj":"IN"},{"id":"T11228","span":{"begin":484,"end":494},"obj":"NN"},{"id":"T11229","span":{"begin":495,"end":497},"obj":"CD"},{"id":"T11230","span":{"begin":498,"end":501},"obj":"VBD"},{"id":"T11231","span":{"begin":502,"end":515},"obj":"RB"},{"id":"T11232","span":{"begin":525,"end":528},"obj":"IN"},{"id":"T11233","span":{"begin":529,"end":534},"obj":"NNS"},{"id":"T11234","span":{"begin":535,"end":537},"obj":"IN"},{"id":"T11235","span":{"begin":538,"end":549},"obj":"NNS"},{"id":"T11236","span":{"begin":550,"end":560},"obj":"VBN"},{"id":"T11237","span":{"begin":561,"end":565},"obj":"IN"},{"id":"T11238","span":{"begin":566,"end":569},"obj":"DT"},{"id":"T11239","span":{"begin":587,"end":592},"obj":"NN"},{"id":"T11240","span":{"begin":570,"end":577},"obj":"JJ"},{"id":"T11241","span":{"begin":582,"end":586},"obj":"NN"},{"id":"T11242","span":{"begin":578,"end":581},"obj":"NN"},{"id":"T11243","span":{"begin":592,"end":593},"obj":"."},{"id":"T11244","span":{"begin":593,"end":717},"obj":"sentence"},{"id":"T11245","span":{"begin":594,"end":596},"obj":"IN"},{"id":"T11246","span":{"begin":597,"end":608},"obj":"VBN"},{"id":"T11247","span":{"begin":616,"end":619},"obj":"VBD"},{"id":"T11248","span":{"begin":608,"end":610},"obj":","},{"id":"T11249","span":{"begin":610,"end":615},"obj":"EX"},{"id":"T11250","span":{"begin":620,"end":622},"obj":"DT"},{"id":"T11251","span":{"begin":623,"end":630},"obj":"NN"},{"id":"T11252","span":{"begin":631,"end":633},"obj":"IN"},{"id":"T11253","span":{"begin":634,"end":635},"obj":"DT"},{"id":"T11254","span":{"begin":652,"end":659},"obj":"NN"},{"id":"T11255","span":{"begin":636,"end":646},"obj":"VBN"},{"id":"T11256","span":{"begin":647,"end":651},"obj":"NN"},{"id":"T11257","span":{"begin":660,"end":663},"obj":"CC"},{"id":"T11258","span":{"begin":664,"end":665},"obj":"DT"},{"id":"T11259","span":{"begin":675,"end":679},"obj":"NN"},{"id":"T11260","span":{"begin":666,"end":669},"obj":"NN"},{"id":"T11261","span":{"begin":670,"end":674},"obj":"NN"},{"id":"T11262","span":{"begin":679,"end":681},"obj":","},{"id":"T11263","span":{"begin":681,"end":693},"obj":"RB"},{"id":"T11264","span":{"begin":694,"end":704},"obj":"NN"},{"id":"T11265","span":{"begin":705,"end":707},"obj":"CD"},{"id":"T11266","span":{"begin":708,"end":710},"obj":"IN"},{"id":"T11267","span":{"begin":711,"end":713},"obj":"CD"},{"id":"T11268","span":{"begin":714,"end":716},"obj":"NN"},{"id":"T11269","span":{"begin":716,"end":717},"obj":"."},{"id":"T11270","span":{"begin":717,"end":885},"obj":"sentence"},{"id":"T11271","span":{"begin":718,"end":722},"obj":"DT"},{"id":"T11272","span":{"begin":723,"end":731},"obj":"VBZ"},{"id":"T11273","span":{"begin":732,"end":736},"obj":"IN"},{"id":"T11274","span":{"begin":816,"end":820},"obj":"VBN"},{"id":"T11275","span":{"begin":737,"end":740},"obj":"DT"},{"id":"T11276","span":{"begin":749,"end":759},"obj":"NN"},{"id":"T11277","span":{"begin":741,"end":748},"obj":"JJ"},{"id":"T11278","span":{"begin":760,"end":762},"obj":"IN"},{"id":"T11279","span":{"begin":763,"end":766},"obj":"NN"},{"id":"T11280","span":{"begin":767,"end":771},"obj":"NN"},{"id":"T11281","span":{"begin":772,"end":775},"obj":"IN"},{"id":"T11282","span":{"begin":776,"end":779},"obj":"DT"},{"id":"T11283","span":{"begin":794,"end":799},"obj":"NN"},{"id":"T11284","span":{"begin":780,"end":790},"obj":"NN"},{"id":"T11285","span":{"begin":791,"end":793},"obj":"CD"},{"id":"T11286","span":{"begin":800,"end":802},"obj":"VBZ"},{"id":"T11287","span":{"begin":803,"end":807},"obj":"RBR"},{"id":"T11288","span":{"begin":808,"end":815},"obj":"RB"},{"id":"T11289","span":{"begin":821,"end":823},"obj":"IN"},{"id":"T11290","span":{"begin":824,"end":829},"obj":"NN"},{"id":"T11291","span":{"begin":835,"end":845},"obj":"NN"},{"id":"T11292","span":{"begin":830,"end":834},"obj":"NN"},{"id":"T11293","span":{"begin":846,"end":850},"obj":"IN"},{"id":"T11294","span":{"begin":851,"end":854},"obj":"VBP"},{"id":"T11295","span":{"begin":855,"end":858},"obj":"DT"},{"id":"T11296","span":{"begin":879,"end":884},"obj":"NNS"},{"id":"T11297","span":{"begin":859,"end":864},"obj":"JJ"},{"id":"T11298","span":{"begin":865,"end":869},"obj":"CD"},{"id":"T11299","span":{"begin":870,"end":873},"obj":"NN"},{"id":"T11300","span":{"begin":874,"end":878},"obj":"NN"},{"id":"T11301","span":{"begin":884,"end":885},"obj":"."}],"relations":[{"id":"R3365","pred":"aux","subj":"T11125","obj":"T11126"},{"id":"R3366","pred":"advcl","subj":"T11126","obj":"T11127"},{"id":"R3367","pred":"dobj","subj":"T11128","obj":"T11126"},{"id":"R3368","pred":"punct","subj":"T11129","obj":"T11127"},{"id":"R3369","pred":"nsubj","subj":"T11130","obj":"T11127"},{"id":"R3370","pred":"advmod","subj":"T11131","obj":"T11127"},{"id":"R3371","pred":"det","subj":"T11132","obj":"T11133"},{"id":"R3372","pred":"dobj","subj":"T11133","obj":"T11127"},{"id":"R3373","pred":"prep","subj":"T11134","obj":"T11133"},{"id":"R3374","pred":"det","subj":"T11135","obj":"T11136"},{"id":"R3375","pred":"pobj","subj":"T11136","obj":"T11134"},{"id":"R3376","pred":"nummod","subj":"T11137","obj":"T11136"},{"id":"R3377","pred":"prep","subj":"T11138","obj":"T11133"},{"id":"R3378","pred":"det","subj":"T11139","obj":"T11140"},{"id":"R3379","pred":"pobj","subj":"T11140","obj":"T11138"},{"id":"R3380","pred":"prep","subj":"T11141","obj":"T11127"},{"id":"R3381","pred":"nummod","subj":"T11142","obj":"T11143"},{"id":"R3382","pred":"compound","subj":"T11143","obj":"T11145"},{"id":"R3383","pred":"punct","subj":"T11144","obj":"T11143"},{"id":"R3384","pred":"pobj","subj":"T11145","obj":"T11141"},{"id":"R3385","pred":"mark","subj":"T11146","obj":"T11147"},{"id":"R3386","pred":"advcl","subj":"T11147","obj":"T11127"},{"id":"R3387","pred":"prep","subj":"T11148","obj":"T11147"},{"id":"R3388","pred":"compound","subj":"T11149","obj":"T11150"},{"id":"R3389","pred":"pobj","subj":"T11150","obj":"T11148"},{"id":"R3390","pred":"punct","subj":"T11151","obj":"T11127"},{"id":"R3391","pred":"prep","subj":"T11153","obj":"T11154"},{"id":"R3392","pred":"pobj","subj":"T11155","obj":"T11153"},{"id":"R3393","pred":"aux","subj":"T11156","obj":"T11157"},{"id":"R3394","pred":"acl","subj":"T11157","obj":"T11155"},{"id":"R3395","pred":"mark","subj":"T11158","obj":"T11159"},{"id":"R3396","pred":"ccomp","subj":"T11159","obj":"T11157"},{"id":"R3397","pred":"expl","subj":"T11160","obj":"T11159"},{"id":"R3398","pred":"det","subj":"T11161","obj":"T11162"},{"id":"R3399","pred":"dobj","subj":"T11162","obj":"T11159"},{"id":"R3400","pred":"prep","subj":"T11163","obj":"T11162"},{"id":"R3401","pred":"det","subj":"T11164","obj":"T11165"},{"id":"R3402","pred":"pobj","subj":"T11165","obj":"T11163"},{"id":"R3403","pred":"punct","subj":"T11166","obj":"T11154"},{"id":"R3404","pred":"nsubj","subj":"T11167","obj":"T11154"},{"id":"R3405","pred":"dobj","subj":"T11168","obj":"T11154"},{"id":"R3406","pred":"prep","subj":"T11169","obj":"T11168"},{"id":"R3407","pred":"pobj","subj":"T11170","obj":"T11169"},{"id":"R3408","pred":"punct","subj":"T11171","obj":"T11172"},{"id":"R3409","pred":"amod","subj":"T11172","obj":"T11170"},{"id":"R3410","pred":"prep","subj":"T11173","obj":"T11154"},{"id":"R3411","pred":"pobj","subj":"T11174","obj":"T11173"},{"id":"R3412","pred":"prep","subj":"T11175","obj":"T11174"},{"id":"R3413","pred":"det","subj":"T11176","obj":"T11177"},{"id":"R3414","pred":"pobj","subj":"T11177","obj":"T11175"},{"id":"R3415","pred":"prep","subj":"T11178","obj":"T11154"},{"id":"R3416","pred":"amod","subj":"T11179","obj":"T11180"},{"id":"R3417","pred":"pobj","subj":"T11180","obj":"T11178"},{"id":"R3418","pred":"nummod","subj":"T11181","obj":"T11182"},{"id":"R3419","pred":"compound","subj":"T11182","obj":"T11180"},{"id":"R3420","pred":"punct","subj":"T11183","obj":"T11182"},{"id":"R3421","pred":"prep","subj":"T11184","obj":"T11154"},{"id":"R3422","pred":"det","subj":"T11185","obj":"T11186"},{"id":"R3423","pred":"pobj","subj":"T11186","obj":"T11184"},{"id":"R3424","pred":"prep","subj":"T11187","obj":"T11186"},{"id":"R3425","pred":"det","subj":"T11188","obj":"T11189"},{"id":"R3426","pred":"pobj","subj":"T11189","obj":"T11187"},{"id":"R3427","pred":"det","subj":"T11196","obj":"T11197"},{"id":"R3428","pred":"compound","subj":"T11190","obj":"T11189"},{"id":"R3429","pred":"dobj","subj":"T11197","obj":"T11195"},{"id":"R3430","pred":"nmod","subj":"T11198","obj":"T11197"},{"id":"R3431","pred":"punct","subj":"T11191","obj":"T11192"},{"id":"R3432","pred":"amod","subj":"T11199","obj":"T11197"},{"id":"R3433","pred":"punct","subj":"T11200","obj":"T11154"},{"id":"R3434","pred":"parataxis","subj":"T11192","obj":"T11189"},{"id":"R3435","pred":"compound","subj":"T11202","obj":"T11203"},{"id":"R3436","pred":"nsubj","subj":"T11203","obj":"T11204"},{"id":"R3437","pred":"compound","subj":"T11193","obj":"T11192"},{"id":"R3438","pred":"det","subj":"T11205","obj":"T11206"},{"id":"R3439","pred":"punct","subj":"T11194","obj":"T11192"},{"id":"R3440","pred":"dobj","subj":"T11206","obj":"T11204"},{"id":"R3441","pred":"prep","subj":"T11207","obj":"T11206"},{"id":"R3442","pred":"pobj","subj":"T11208","obj":"T11207"},{"id":"R3443","pred":"advcl","subj":"T11195","obj":"T11154"},{"id":"R3444","pred":"acl","subj":"T11209","obj":"T11206"},{"id":"R3445","pred":"prep","subj":"T11210","obj":"T11209"},{"id":"R3447","pred":"punct","subj":"T11211","obj":"T11212"},{"id":"R3448","pred":"pobj","subj":"T11212","obj":"T11210"},{"id":"R3449","pred":"prep","subj":"T11213","obj":"T11212"},{"id":"R3450","pred":"det","subj":"T11214","obj":"T11215"},{"id":"R3452","pred":"pobj","subj":"T11215","obj":"T11213"},{"id":"R3453","pred":"compound","subj":"T11216","obj":"T11215"},{"id":"R3454","pred":"compound","subj":"T11217","obj":"T11215"},{"id":"R3456","pred":"punct","subj":"T11218","obj":"T11215"},{"id":"R3457","pred":"prep","subj":"T11219","obj":"T11209"},{"id":"R3458","pred":"det","subj":"T11220","obj":"T11221"},{"id":"R3459","pred":"pobj","subj":"T11221","obj":"T11219"},{"id":"R3461","pred":"punct","subj":"T11222","obj":"T11204"},{"id":"R3463","pred":"nummod","subj":"T11224","obj":"T11225"},{"id":"R3464","pred":"nsubjpass","subj":"T11225","obj":"T11226"},{"id":"R3466","pred":"prep","subj":"T11227","obj":"T11225"},{"id":"R3467","pred":"pobj","subj":"T11228","obj":"T11227"},{"id":"R3468","pred":"nummod","subj":"T11229","obj":"T11228"},{"id":"R3470","pred":"auxpass","subj":"T11230","obj":"T11226"},{"id":"R3471","pred":"advmod","subj":"T11231","obj":"T11226"},{"id":"R3472","pred":"prep","subj":"T11232","obj":"T11226"},{"id":"R3473","pred":"pobj","subj":"T11233","obj":"T11232"},{"id":"R3477","pred":"prep","subj":"T11234","obj":"T11233"},{"id":"R3479","pred":"pobj","subj":"T11235","obj":"T11234"},{"id":"R3480","pred":"acl","subj":"T11236","obj":"T11235"},{"id":"R3481","pred":"prep","subj":"T11237","obj":"T11236"},{"id":"R3483","pred":"det","subj":"T11238","obj":"T11239"},{"id":"R3484","pred":"pobj","subj":"T11239","obj":"T11237"},{"id":"R3486","pred":"amod","subj":"T11240","obj":"T11241"},{"id":"R3487","pred":"compound","subj":"T11241","obj":"T11239"},{"id":"R3488","pred":"compound","subj":"T11242","obj":"T11241"},{"id":"R3489","pred":"punct","subj":"T11243","obj":"T11226"},{"id":"R3491","pred":"mark","subj":"T11245","obj":"T11246"},{"id":"R3492","pred":"advcl","subj":"T11246","obj":"T11247"},{"id":"R3494","pred":"punct","subj":"T11248","obj":"T11247"},{"id":"R3496","pred":"expl","subj":"T11249","obj":"T11247"},{"id":"R3497","pred":"det","subj":"T11250","obj":"T11251"},{"id":"R3500","pred":"attr","subj":"T11251","obj":"T11247"},{"id":"R3502","pred":"prep","subj":"T11252","obj":"T11251"},{"id":"R3503","pred":"det","subj":"T11253","obj":"T11254"},{"id":"R3504","pred":"pobj","subj":"T11254","obj":"T11252"},{"id":"R3506","pred":"amod","subj":"T11255","obj":"T11254"},{"id":"R3507","pred":"compound","subj":"T11256","obj":"T11254"},{"id":"R3508","pred":"cc","subj":"T11257","obj":"T11254"},{"id":"R3510","pred":"det","subj":"T11258","obj":"T11259"},{"id":"R3511","pred":"conj","subj":"T11259","obj":"T11254"},{"id":"R3513","pred":"compound","subj":"T11260","obj":"T11261"},{"id":"R3514","pred":"compound","subj":"T11261","obj":"T11259"},{"id":"R3515","pred":"punct","subj":"T11262","obj":"T11251"},{"id":"R3517","pred":"advmod","subj":"T11263","obj":"T11264"},{"id":"R3518","pred":"appos","subj":"T11264","obj":"T11251"},{"id":"R3519","pred":"nummod","subj":"T11265","obj":"T11264"},{"id":"R3520","pred":"prep","subj":"T11266","obj":"T11264"},{"id":"R3521","pred":"nummod","subj":"T11267","obj":"T11268"},{"id":"R3522","pred":"pobj","subj":"T11268","obj":"T11266"},{"id":"R3524","pred":"punct","subj":"T11269","obj":"T11247"},{"id":"R3526","pred":"nsubj","subj":"T11271","obj":"T11272"},{"id":"R3528","pred":"mark","subj":"T11273","obj":"T11274"},{"id":"R3529","pred":"ccomp","subj":"T11274","obj":"T11272"},{"id":"R3530","pred":"det","subj":"T11275","obj":"T11276"},{"id":"R3532","pred":"nsubjpass","subj":"T11276","obj":"T11274"},{"id":"R3533","pred":"amod","subj":"T11277","obj":"T11276"},{"id":"R3534","pred":"prep","subj":"T11278","obj":"T11276"},{"id":"R3535","pred":"compound","subj":"T11279","obj":"T11280"},{"id":"R3536","pred":"pobj","subj":"T11280","obj":"T11278"},{"id":"R3538","pred":"prep","subj":"T11281","obj":"T11276"},{"id":"R3539","pred":"det","subj":"T11282","obj":"T11283"},{"id":"R3541","pred":"pobj","subj":"T11283","obj":"T11281"},{"id":"R3542","pred":"nmod","subj":"T11284","obj":"T11283"},{"id":"R3543","pred":"nummod","subj":"T11285","obj":"T11284"},{"id":"R3545","pred":"auxpass","subj":"T11286","obj":"T11274"},{"id":"R3546","pred":"advmod","subj":"T11287","obj":"T11288"},{"id":"R3547","pred":"advmod","subj":"T11288","obj":"T11274"},{"id":"R3549","pred":"prep","subj":"T11289","obj":"T11274"},{"id":"R3550","pred":"compound","subj":"T11290","obj":"T11291"},{"id":"R3551","pred":"pobj","subj":"T11291","obj":"T11289"},{"id":"R3553","pred":"compound","subj":"T11292","obj":"T11291"},{"id":"R3554","pred":"mark","subj":"T11293","obj":"T11294"},{"id":"R3555","pred":"advcl","subj":"T11294","obj":"T11274"},{"id":"R3556","pred":"det","subj":"T11295","obj":"T11296"},{"id":"R3557","pred":"nsubj","subj":"T11296","obj":"T11294"},{"id":"R3559","pred":"amod","subj":"T11297","obj":"T11296"},{"id":"R3560","pred":"nummod","subj":"T11298","obj":"T11296"},{"id":"R3561","pred":"compound","subj":"T11299","obj":"T11300"},{"id":"R3563","pred":"compound","subj":"T11300","obj":"T11296"},{"id":"R3564","pred":"punct","subj":"T11301","obj":"T11272"}],"text":"To assess this, we first determined the distribution of these 1,478 eQTLs across the genome in 2-cM bins as shown in Figure 5C. In order to see if there exist any hotspots for these eQTLs, we tested eQTLs with p \u003c 0.001 for enrichment along the genome in overlapping 2-cM bins against the distribution of all liver eQTLs (Figure 4A) using a Fisher exact test. Figure 5D shows the significance of enrichment reported as −log10 of the enrichment p-value across the genome. One locus on Chromosome 19 was significantly enriched for eQTLs of transcripts correlated with the gonadal fat mass trait. As anticipated, there was an overlap of a correlated eQTL hotspot and a fat mass cQTL, specifically Chromosome 19 at 40 cM. This suggests that the genetic regulation of fat mass for the Chromosome 19 locus is more closely tied to liver gene expression than are the other four fat mass cQTLs."}