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PMC:1315279 / 18868-19934 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T4219 9-17 NN denotes staining
T4222 75-79 VBN denotes used
T4223 18-21 IN denotes for
T4224 22-30 NN denotes alkaline
T4225 31-42 NN denotes phosphatase
T4226 62-70 NN denotes activity
T4227 43-44 -LRB- denotes (
T4228 44-47 NN denotes ALP
T4229 47-48 : denotes ;
T4230 55-60 NN denotes stain
T4231 49-54 JJ denotes brown
T4232 60-61 -RRB- denotes )
T4233 71-74 VBD denotes was
T4234 80-82 IN denotes as
T4235 83-84 DT denotes a
T4236 85-94 NN denotes biomarker
T4237 95-98 IN denotes for
T4238 99-110 NNS denotes osteoblasts
T4239 111-114 CC denotes and
T4240 115-123 NN denotes tartrate
T4241 124-133 JJ denotes resistant
T4242 123-124 HYPH denotes -
T4243 194-202 NN denotes activity
T4244 134-137 NN denotes ALP
T4245 138-139 -LRB- denotes (
T4246 187-192 NN denotes stain
T4247 139-147 NN denotes tartrate
T4248 148-157 JJ denotes resistant
T4249 147-148 HYPH denotes -
T4250 163-174 NN denotes phosphatase
T4251 158-162 NN denotes acid
T4252 175-176 -LRB- denotes [
T4253 176-180 NN denotes TRAP
T4254 180-181 -RRB- denotes ]
T4255 181-182 : denotes ;
T4256 183-186 JJ denotes red
T4257 192-193 -RRB- denotes )
T4258 203-205 IN denotes as
T4259 206-207 DT denotes a
T4260 208-214 NN denotes marker
T4261 215-218 IN denotes for
T4262 219-230 NNS denotes osteoclasts
T4263 230-231 . denotes .
T4264 231-351 sentence denotes Little difference was seen between Sam68+/+ (Figure 5A and 5B) and Sam68−/− (Figure 5C and 5D) mice at 4 months of age.
T4265 232-238 JJ denotes Little
T4266 239-249 NN denotes difference
T4267 254-258 VBN denotes seen
T4268 250-253 VBD denotes was
T4269 259-266 IN denotes between
T4270 267-272 NN denotes Sam68
T4271 327-331 NNS denotes mice
T4272 272-273 SYM denotes +
T4273 273-274 HYPH denotes /
T4274 274-275 SYM denotes +
T4275 276-277 -LRB- denotes (
T4276 284-286 NN denotes 5A
T4277 277-283 NN denotes Figure
T4278 287-290 CC denotes and
T4279 291-293 NN denotes 5B
T4280 293-294 -RRB- denotes )
T4281 295-298 CC denotes and
T4282 299-304 NN denotes Sam68
T4283 304-305 SYM denotes −
T4284 305-306 HYPH denotes /
T4285 306-307 SYM denotes −
T4286 308-309 -LRB- denotes (
T4287 316-318 NN denotes 5C
T4288 309-315 NN denotes Figure
T4289 319-322 CC denotes and
T4290 323-325 NN denotes 5D
T4291 325-326 -RRB- denotes )
T4292 332-334 IN denotes at
T4293 335-336 CD denotes 4
T4294 337-343 NNS denotes months
T4295 344-346 IN denotes of
T4296 347-350 NN denotes age
T4297 350-351 . denotes .
T4298 351-519 sentence denotes ALP- and TRAP-positive cells were reduced in the 12-month-old Sam68+/+ mice (Figure 5E and 5F) and remained unchanged in 12-month-old Sam68−/− mice (Figure 5G and 5H).
T4299 352-355 NN denotes ALP
T4300 366-374 JJ denotes positive
T4301 355-356 HYPH denotes -
T4302 357-360 CC denotes and
T4303 361-365 NN denotes TRAP
T4304 365-366 HYPH denotes -
T4305 375-380 NNS denotes cells
T4306 386-393 VBN denotes reduced
T4307 381-385 VBD denotes were
T4308 394-396 IN denotes in
T4309 397-400 DT denotes the
T4310 423-427 NNS denotes mice
T4311 401-403 CD denotes 12
T4312 404-409 NN denotes month
T4313 403-404 HYPH denotes -
T4314 410-413 JJ denotes old
T4315 409-410 HYPH denotes -
T4316 414-419 NN denotes Sam68
T4317 419-420 SYM denotes +
T4318 420-421 HYPH denotes /
T4319 421-422 SYM denotes +
T4320 428-429 -LRB- denotes (
T4321 436-438 NN denotes 5E
T4322 429-435 NN denotes Figure
T4323 439-442 CC denotes and
T4324 443-445 NN denotes 5F
T4325 445-446 -RRB- denotes )
T4326 447-450 CC denotes and
T4327 451-459 VBD denotes remained
T4328 460-469 JJ denotes unchanged
T4329 470-472 IN denotes in
T4330 473-475 CD denotes 12
T4331 476-481 NN denotes month
T4332 475-476 HYPH denotes -
T4333 482-485 JJ denotes old
T4334 481-482 HYPH denotes -
T4335 495-499 NNS denotes mice
T4336 486-491 NN denotes Sam68
T4337 491-492 SYM denotes −
T4338 492-493 HYPH denotes /
T4339 493-494 SYM denotes −
T4340 500-501 -LRB- denotes (
T4341 508-510 NN denotes 5G
T4342 501-507 NN denotes Figure
T4343 511-514 CC denotes and
T4344 515-517 NN denotes 5H
T4345 517-518 -RRB- denotes )
T4346 518-519 . denotes .
T4347 519-757 sentence denotes The reduction in both osteoblast and osteoclast activity in the 12-month-old Sam68+/+ mice argued against bone being lost primarily due to a relative increase in osteoclast over osteoblast activity, as seen in high turnover disease [49].
T4348 520-523 DT denotes The
T4349 524-533 NN denotes reduction
T4350 611-617 VBD denotes argued
T4351 534-536 IN denotes in
T4352 537-541 CC denotes both
T4353 542-552 NN denotes osteoblast
T4354 568-576 NN denotes activity
T4355 553-556 CC denotes and
T4356 557-567 NN denotes osteoclast
T4357 577-579 IN denotes in
T4358 580-583 DT denotes the
T4359 606-610 NNS denotes mice
T4360 584-586 CD denotes 12
T4361 587-592 NN denotes month
T4362 586-587 HYPH denotes -
T4363 593-596 JJ denotes old
T4364 592-593 HYPH denotes -
T4365 597-602 NN denotes Sam68
T4366 602-603 SYM denotes +
T4367 603-604 HYPH denotes /
T4368 604-605 SYM denotes +
T4369 618-625 IN denotes against
T4370 626-630 NN denotes bone
T4371 637-641 VBN denotes lost
T4372 631-636 VBG denotes being
T4373 642-651 RB denotes primarily
T4374 652-655 IN denotes due
T4375 656-658 IN denotes to
T4376 659-660 DT denotes a
T4377 670-678 NN denotes increase
T4378 661-669 JJ denotes relative
T4379 679-681 IN denotes in
T4380 682-692 NN denotes osteoclast
T4381 693-697 IN denotes over
T4382 698-708 NN denotes osteoblast
T4383 709-717 NN denotes activity
T4384 717-719 , denotes ,
T4385 719-721 IN denotes as
T4386 722-726 VBN denotes seen
T4387 727-729 IN denotes in
T4388 730-734 JJ denotes high
T4389 735-743 NN denotes turnover
T4390 744-751 NN denotes disease
T4391 752-753 -LRB- denotes [
T4392 753-755 CD denotes 49
T4393 755-756 -RRB- denotes ]
T4394 756-757 . denotes .
R2510 T4219 T4222 nsubjpass staining,used
R2513 T4223 T4219 prep for,staining
R2514 T4224 T4225 nmod alkaline,phosphatase
R2515 T4225 T4226 nmod phosphatase,activity
R2516 T4226 T4223 pobj activity,for
R2517 T4227 T4225 punct (,phosphatase
R2518 T4228 T4225 appos ALP,phosphatase
R2519 T4229 T4230 punct ;,stain
R2520 T4230 T4228 parataxis stain,ALP
R2521 T4231 T4230 amod brown,stain
R2522 T4232 T4230 punct ),stain
R2523 T4233 T4222 auxpass was,used
R2524 T4234 T4222 prep as,used
R2525 T4235 T4236 det a,biomarker
R2526 T4236 T4234 pobj biomarker,as
R2527 T4237 T4236 prep for,biomarker
R2528 T4238 T4237 pobj osteoblasts,for
R2529 T4239 T4238 cc and,osteoblasts
R2530 T4240 T4241 npadvmod tartrate,resistant
R2531 T4241 T4243 amod resistant,activity
R2532 T4242 T4241 punct -,resistant
R2533 T4243 T4238 conj activity,osteoblasts
R2534 T4244 T4243 nmod ALP,activity
R2535 T4245 T4246 punct (,stain
R2536 T4246 T4243 parataxis stain,activity
R2537 T4247 T4248 npadvmod tartrate,resistant
R2538 T4248 T4250 amod resistant,phosphatase
R2539 T4249 T4248 punct -,resistant
R2540 T4250 T4246 dep phosphatase,stain
R2541 T4251 T4250 compound acid,phosphatase
R2542 T4252 T4250 punct [,phosphatase
R2543 T4253 T4250 appos TRAP,phosphatase
R2544 T4254 T4246 punct ],stain
R2545 T4255 T4246 punct ;,stain
R2546 T4256 T4246 amod red,stain
R2547 T4257 T4246 punct ),stain
R2548 T4258 T4222 prep as,used
R2549 T4259 T4260 det a,marker
R2550 T4260 T4258 pobj marker,as
R2551 T4261 T4260 prep for,marker
R2552 T4262 T4261 pobj osteoclasts,for
R2553 T4263 T4222 punct .,used
R2554 T4265 T4266 amod Little,difference
R2555 T4266 T4267 nsubjpass difference,seen
R2556 T4268 T4267 auxpass was,seen
R2557 T4269 T4267 prep between,seen
R2558 T4270 T4271 nmod Sam68,mice
R2559 T4271 T4269 pobj mice,between
R2560 T4272 T4270 punct +,Sam68
R2561 T4273 T4270 punct /,Sam68
R2562 T4274 T4270 punct +,Sam68
R2563 T4275 T4276 punct (,5A
R2564 T4276 T4270 parataxis 5A,Sam68
R2565 T4277 T4276 compound Figure,5A
R2566 T4278 T4276 cc and,5A
R2567 T4279 T4276 conj 5B,5A
R2568 T4280 T4276 punct ),5A
R2569 T4281 T4270 cc and,Sam68
R2570 T4282 T4270 conj Sam68,Sam68
R2571 T4283 T4282 punct −,Sam68
R2572 T4284 T4282 punct /,Sam68
R2573 T4285 T4282 punct −,Sam68
R2574 T4286 T4287 punct (,5C
R2575 T4287 T4282 parataxis 5C,Sam68
R2576 T4288 T4287 compound Figure,5C
R2577 T4289 T4287 cc and,5C
R2578 T4290 T4287 conj 5D,5C
R2579 T4291 T4287 punct ),5C
R2580 T4292 T4267 prep at,seen
R2581 T4293 T4294 nummod 4,months
R2582 T4294 T4292 pobj months,at
R2583 T4295 T4294 prep of,months
R2584 T4296 T4295 pobj age,of
R2585 T4297 T4267 punct .,seen
R2586 T4299 T4300 npadvmod ALP,positive
R2587 T4300 T4305 amod positive,cells
R2588 T4301 T4299 punct -,ALP
R2589 T4302 T4299 cc and,ALP
R2590 T4303 T4299 conj TRAP,ALP
R2591 T4304 T4300 punct -,positive
R2592 T4305 T4306 nsubjpass cells,reduced
R2593 T4307 T4306 auxpass were,reduced
R2594 T4308 T4306 prep in,reduced
R2595 T4309 T4310 det the,mice
R2596 T4310 T4308 pobj mice,in
R2597 T4311 T4312 nummod 12,month
R2598 T4312 T4314 npadvmod month,old
R2599 T4313 T4312 punct -,month
R2600 T4314 T4310 amod old,mice
R2601 T4315 T4314 punct -,old
R2602 T4316 T4310 nmod Sam68,mice
R2603 T4317 T4316 punct +,Sam68
R2604 T4318 T4316 punct /,Sam68
R2605 T4319 T4316 punct +,Sam68
R2606 T4320 T4321 punct (,5E
R2607 T4321 T4306 parataxis 5E,reduced
R2608 T4322 T4321 compound Figure,5E
R2609 T4323 T4321 cc and,5E
R2610 T4324 T4321 conj 5F,5E
R2611 T4325 T4321 punct ),5E
R2612 T4326 T4306 cc and,reduced
R2613 T4327 T4306 conj remained,reduced
R2614 T4328 T4327 acomp unchanged,remained
R2615 T4329 T4327 prep in,remained
R2616 T4330 T4331 nummod 12,month
R2617 T4331 T4333 npadvmod month,old
R2618 T4332 T4331 punct -,month
R2619 T4333 T4335 amod old,mice
R2620 T4334 T4333 punct -,old
R2621 T4335 T4329 pobj mice,in
R2622 T4336 T4335 nmod Sam68,mice
R2623 T4337 T4336 punct −,Sam68
R2624 T4338 T4336 punct /,Sam68
R2625 T4339 T4336 punct −,Sam68
R2626 T4340 T4341 punct (,5G
R2627 T4341 T4327 parataxis 5G,remained
R2628 T4342 T4341 compound Figure,5G
R2629 T4343 T4341 cc and,5G
R2630 T4344 T4341 conj 5H,5G
R2631 T4345 T4341 punct ),5G
R2632 T4346 T4306 punct .,reduced
R2633 T4348 T4349 det The,reduction
R2634 T4349 T4350 nsubj reduction,argued
R2635 T4351 T4349 prep in,reduction
R2636 T4352 T4353 preconj both,osteoblast
R2637 T4353 T4354 nmod osteoblast,activity
R2638 T4354 T4351 pobj activity,in
R2639 T4355 T4353 cc and,osteoblast
R2640 T4356 T4353 conj osteoclast,osteoblast
R2641 T4357 T4349 prep in,reduction
R2642 T4358 T4359 det the,mice
R2643 T4359 T4357 pobj mice,in
R2644 T4360 T4361 nummod 12,month
R2645 T4361 T4363 npadvmod month,old
R2646 T4362 T4361 punct -,month
R2647 T4363 T4359 amod old,mice
R2648 T4364 T4363 punct -,old
R2649 T4365 T4359 nmod Sam68,mice
R2650 T4366 T4365 punct +,Sam68
R2651 T4367 T4365 punct /,Sam68
R2652 T4368 T4365 punct +,Sam68
R2653 T4369 T4350 prep against,argued
R2654 T4370 T4371 nsubjpass bone,lost
R2655 T4371 T4369 pcomp lost,against
R2656 T4372 T4371 auxpass being,lost
R2657 T4373 T4374 advmod primarily,due
R2658 T4374 T4371 prep due,lost
R2659 T4375 T4374 pcomp to,due
R2660 T4376 T4377 det a,increase
R2661 T4377 T4374 pobj increase,due
R2662 T4378 T4377 amod relative,increase
R2663 T4379 T4377 prep in,increase
R2664 T4380 T4379 pobj osteoclast,in
R2665 T4381 T4380 prep over,osteoclast
R2666 T4382 T4381 pobj osteoblast,over
R2667 T4383 T4380 appos activity,osteoclast
R2668 T4384 T4371 punct ", ",lost
R2669 T4385 T4386 mark as,seen
R2670 T4386 T4371 advcl seen,lost
R2671 T4387 T4386 prep in,seen
R2672 T4388 T4389 amod high,turnover
R2673 T4389 T4390 compound turnover,disease
R2674 T4390 T4387 pobj disease,in
R2675 T4391 T4392 punct [,49
R2676 T4392 T4350 parataxis 49,argued
R2677 T4393 T4392 punct ],49
R2678 T4394 T4350 punct .,argued

2_test

Id Subject Object Predicate Lexical cue
16362077-7816067-85614459 753-755 7816067 denotes 49
T57055 753-755 7816067 denotes 49

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T3970 99-110 CL:0000062 denotes osteoblasts
T3971 115-137 PR:000001937 denotes tartrate-resistant ALP
T3972 139-174 PR:000001937 denotes tartrate-resistant acid phosphatase
T3973 158-162 CHEBI:37527 denotes acid
T3974 176-180 PR:000001937 denotes TRAP
T3975 219-230 CL:0000092 denotes osteoclasts
T3976 267-272 PR:000009279 denotes Sam68
T3977 299-304 PR:000009279 denotes Sam68
T3978 327-331 NCBITaxon:10088 denotes mice
T3979 361-365 PR:000001937 denotes TRAP
T3980 414-419 PR:000009279 denotes Sam68
T3981 423-427 NCBITaxon:10088 denotes mice
T3982 486-491 PR:000009279 denotes Sam68
T3983 495-499 NCBITaxon:10088 denotes mice
T3984 542-552 CL:0000062 denotes osteoblast
T3985 557-567 CL:0000092 denotes osteoclast
T3986 597-602 PR:000009279 denotes Sam68
T3987 606-610 NCBITaxon:10088 denotes mice
T3988 682-692 CL:0000092 denotes osteoclast
T3989 698-708 CL:0000062 denotes osteoblast

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T4047 22-42 GO_PR_EXT:alkaline_phosphatase denotes alkaline phosphatase
T4048 44-47 GO_PR_EXT:alkaline_phosphatase denotes ALP
T4049 85-94 CHEBI_SO_EXT:biomarker denotes biomarker
T4050 99-110 CL:0000062 denotes osteoblasts
T4051 115-123 CHEBI_EXT:tartrate denotes tartrate
T4052 115-137 PR_EXT:000001937 denotes tartrate-resistant ALP
T4053 134-137 GO_PR_EXT:alkaline_phosphatase denotes ALP
T4054 139-147 CHEBI_EXT:tartrate denotes tartrate
T4055 139-174 PR_EXT:000001937 denotes tartrate-resistant acid phosphatase
T4056 158-162 CHEBI_EXT:37527 denotes acid
T4057 158-174 GO_EXT:0003993 denotes acid phosphatase
T4058 176-180 PR_EXT:000001937 denotes TRAP
T4059 208-214 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes marker
T4060 219-230 CL:0000092 denotes osteoclasts
T4061 267-272 PR_EXT:000009279 denotes Sam68
T4062 272-273 SO_EXT:normal_or_wild_type_or_present denotes +
T4063 274-275 SO_EXT:normal_or_wild_type_or_present denotes +
T4064 299-304 PR_EXT:000009279 denotes Sam68
T4065 304-305 SO_EXT:sequence_nullness_or_absence denotes −
T4066 306-307 SO_EXT:sequence_nullness_or_absence denotes −
T4067 327-331 NCBITaxon:10088 denotes mice
T4068 352-355 GO_PR_EXT:alkaline_phosphatase denotes ALP
T4069 361-365 PR_EXT:000001937 denotes TRAP
T4070 375-380 CL_GO_EXT:cell denotes cells
T4071 414-419 PR_EXT:000009279 denotes Sam68
T4072 419-420 SO_EXT:normal_or_wild_type_or_present denotes +
T4073 421-422 SO_EXT:normal_or_wild_type_or_present denotes +
T4074 423-427 NCBITaxon:10088 denotes mice
T4075 486-491 PR_EXT:000009279 denotes Sam68
T4076 491-492 SO_EXT:sequence_nullness_or_absence denotes −
T4077 493-494 SO_EXT:sequence_nullness_or_absence denotes −
T4078 495-499 NCBITaxon:10088 denotes mice
T4079 542-552 CL:0000062 denotes osteoblast
T4080 557-567 CL:0000092 denotes osteoclast
T4081 597-602 PR_EXT:000009279 denotes Sam68
T4082 602-603 SO_EXT:normal_or_wild_type_or_present denotes +
T4083 604-605 SO_EXT:normal_or_wild_type_or_present denotes +
T4084 606-610 NCBITaxon:10088 denotes mice
T4085 626-630 UBERON_EXT:bone_element_or_tissue denotes bone
T4086 682-692 CL:0000092 denotes osteoclast
T4087 698-708 CL:0000062 denotes osteoblast