PMC:1310901 / 8577-8716
Annnotations
bionlp-st-ge-2016-reference-eval
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4333 | 38-43 | Protein | denotes | IRF-4 |
| T4334 | 44-49 | Protein | denotes | ICSAT |
| T4335 | 51-55 | Protein | denotes | M-17 |
| T4336 | 115-122 | Protein | denotes | β-actin |
| R3513 | T4334 | T4333 | equivalentTo | ICSAT,IRF-4 |
| R3514 | T4335 | T4333 | equivalentTo | M-17,IRF-4 |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4291 | 38-43 | Protein | denotes | IRF-4 |
| T4292 | 44-49 | Protein | denotes | ICSAT |
| T4293 | 51-55 | Protein | denotes | M-17 |
| T4294 | 115-122 | Protein | denotes | β-actin |
| R3499 | T4292 | T4291 | equivalentTo | ICSAT,IRF-4 |
| R3500 | T4293 | T4291 | equivalentTo | M-17,IRF-4 |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4187 | 12-22 | http://purl.obolibrary.org/obo/GO_0019815 | denotes | antibodies |
| T4190 | 12-22 | http://purl.obolibrary.org/obo/GO_0042571 | denotes | antibodies |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3420 | 0-139 | Sentence | denotes | The primary antibodies were goat anti-IRF-4/ICSAT (M-17) (Santa Cruz Biotechnology, Santa Cruz, CA) and mouse anti-β-actin (AC-74) (Sigma). |
| T63 | 0-139 | Sentence | denotes | The primary antibodies were goat anti-IRF-4/ICSAT (M-17) (Santa Cruz Biotechnology, Santa Cruz, CA) and mouse anti-β-actin (AC-74) (Sigma). |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3759 | 0-3 | DT | denotes | The |
| T3760 | 4-11 | JJ | denotes | primary |
| T3761 | 12-22 | NN | denotes | antibodies |
| T3762 | 23-27 | VB | denotes | were |
| T3763 | 28-32 | NN | denotes | goat |
| T3764 | 33-49 | NN | denotes | anti-IRF-4/ICSAT |
| T3765 | 50-51 | -LRB- | denotes | ( |
| T3766 | 51-55 | NN | denotes | M-17 |
| T3767 | 55-56 | -RRB- | denotes | ) |
| T3768 | 57-58 | -LRB- | denotes | ( |
| T3769 | 58-63 | NNP | denotes | Santa |
| T3770 | 64-68 | NNP | denotes | Cruz |
| T3771 | 69-82 | NNP | denotes | Biotechnology |
| T3772 | 82-83 | -COMMA- | denotes | , |
| T3773 | 84-89 | NNP | denotes | Santa |
| T3774 | 90-94 | NNP | denotes | Cruz |
| T3775 | 94-95 | -COMMA- | denotes | , |
| T3776 | 96-98 | NN | denotes | CA |
| T3777 | 98-99 | -RRB- | denotes | ) |
| T3778 | 100-103 | CC | denotes | and |
| T3779 | 104-109 | NN | denotes | mouse |
| T3780 | 110-122 | JJ | denotes | anti-β-actin |
| T3781 | 123-124 | -LRB- | denotes | ( |
| T3782 | 124-129 | NN | denotes | AC-74 |
| T3783 | 129-130 | -RRB- | denotes | ) |
| T3784 | 131-132 | -LRB- | denotes | ( |
| T3785 | 132-137 | NN | denotes | Sigma |
| T3786 | 137-138 | -RRB- | denotes | ) |
| R3061 | T3761 | T3759 | arg1Of | antibodies,The |
| R3062 | T3761 | T3760 | arg1Of | antibodies,primary |
| R3063 | T3761 | T3762 | arg1Of | antibodies,were |
| R3064 | T3764 | T3763 | arg1Of | anti-IRF-4/ICSAT,goat |
| R3065 | T3764 | T3765 | arg1Of | anti-IRF-4/ICSAT,( |
| R3066 | T3764 | T3768 | arg1Of | anti-IRF-4/ICSAT,( |
| R3067 | T3764 | T3778 | arg1Of | anti-IRF-4/ICSAT,and |
| R3068 | T3766 | T3765 | arg2Of | M-17,( |
| R3069 | T3767 | T3765 | arg3Of | ),( |
| R3070 | T3771 | T3768 | arg2Of | Biotechnology,( |
| R3071 | T3771 | T3769 | arg1Of | Biotechnology,Santa |
| R3072 | T3771 | T3770 | arg1Of | Biotechnology,Cruz |
| R3073 | T3771 | T3772 | arg1Of | Biotechnology,"," |
| R3074 | T3774 | T3772 | arg2Of | Cruz,"," |
| R3075 | T3774 | T3773 | arg1Of | Cruz,Santa |
| R3076 | T3774 | T3775 | arg1Of | Cruz,"," |
| R3077 | T3776 | T3775 | arg2Of | CA,"," |
| R3078 | T3777 | T3768 | arg3Of | ),( |
| R3079 | T3778 | T3762 | arg2Of | and,were |
| R3080 | T3778 | T3784 | arg1Of | and,( |
| R3081 | T3782 | T3778 | arg2Of | AC-74,and |
| R3082 | T3782 | T3779 | arg1Of | AC-74,mouse |
| R3083 | T3782 | T3780 | arg1Of | AC-74,anti-β-actin |
| R3084 | T3782 | T3781 | arg2Of | AC-74,( |
| R3085 | T3783 | T3781 | arg3Of | ),( |
| R3086 | T3785 | T3784 | arg2Of | Sigma,( |
| R3087 | T3786 | T3784 | arg3Of | ),( |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4132 | 0-3 | DT | denotes | The |
| T4133 | 4-11 | JJ | denotes | primary |
| T4134 | 12-22 | NNS | denotes | antibodies |
| T4135 | 23-27 | VBD | denotes | were |
| T4136 | 28-32 | JJ | denotes | goat |
| T4137 | 33-43 | JJ | denotes | anti-IRF-4 |
| T4138 | 43-44 | NN | denotes | / |
| T4139 | 44-49 | NNP | denotes | ICSAT |
| T4140 | 50-51 | -LRB- | denotes | ( |
| T4141 | 51-55 | NNP | denotes | M-17 |
| T4142 | 55-56 | -RRB- | denotes | ) |
| T4143 | 57-58 | -LRB- | denotes | ( |
| T4144 | 58-63 | NNP | denotes | Santa |
| T4145 | 64-68 | NNP | denotes | Cruz |
| T4146 | 69-82 | NNP | denotes | Biotechnology |
| T4147 | 82-83 | , | denotes | , |
| T4148 | 84-89 | NNP | denotes | Santa |
| T4149 | 90-94 | NNP | denotes | Cruz |
| T4150 | 94-95 | , | denotes | , |
| T4151 | 96-98 | NNP | denotes | CA |
| T4152 | 98-99 | -RRB- | denotes | ) |
| T4153 | 100-103 | CC | denotes | and |
| T4154 | 104-109 | NN | denotes | mouse |
| T4155 | 110-122 | NN | denotes | anti-β-actin |
| T4156 | 123-124 | -LRB- | denotes | ( |
| T4157 | 124-129 | NN | denotes | AC-74 |
| T4158 | 129-130 | -RRB- | denotes | ) |
| T4159 | 131-132 | -LRB- | denotes | ( |
| T4160 | 132-137 | NNP | denotes | Sigma |
| T4161 | 137-138 | -RRB- | denotes | ) |
| T4162 | 138-139 | . | denotes | . |
| R3418 | T4132 | T4134 | det | The,antibodies |
| R3419 | T4133 | T4134 | amod | primary,antibodies |
| R3420 | T4134 | T4135 | nsubj | antibodies,were |
| R3421 | T4135 | T4135 | ROOT | were,were |
| R3422 | T4136 | T4139 | amod | goat,ICSAT |
| R3423 | T4137 | T4139 | amod | anti-IRF-4,ICSAT |
| R3424 | T4138 | T4139 | compound | /,ICSAT |
| R3425 | T4139 | T4135 | attr | ICSAT,were |
| R3426 | T4140 | T4139 | punct | (,ICSAT |
| R3427 | T4141 | T4139 | appos | M-17,ICSAT |
| R3428 | T4142 | T4139 | punct | ),ICSAT |
| R3429 | T4143 | T4146 | punct | (,Biotechnology |
| R3430 | T4144 | T4145 | compound | Santa,Cruz |
| R3431 | T4145 | T4146 | compound | Cruz,Biotechnology |
| R3432 | T4146 | T4139 | conj | Biotechnology,ICSAT |
| R3433 | T4147 | T4146 | punct | ",",Biotechnology |
| R3434 | T4148 | T4149 | compound | Santa,Cruz |
| R3435 | T4149 | T4146 | conj | Cruz,Biotechnology |
| R3436 | T4150 | T4149 | punct | ",",Cruz |
| R3437 | T4151 | T4149 | conj | CA,Cruz |
| R3438 | T4152 | T4146 | punct | ),Biotechnology |
| R3439 | T4153 | T4146 | cc | and,Biotechnology |
| R3440 | T4154 | T4155 | compound | mouse,anti-β-actin |
| R3441 | T4155 | T4139 | conj | anti-β-actin,ICSAT |
| R3442 | T4156 | T4157 | punct | (,AC-74 |
| R3443 | T4157 | T4155 | appos | AC-74,anti-β-actin |
| R3444 | T4158 | T4155 | punct | ),anti-β-actin |
| R3445 | T4159 | T4160 | punct | (,Sigma |
| R3446 | T4160 | T4139 | appos | Sigma,ICSAT |
| R3447 | T4161 | T4139 | punct | ),ICSAT |
| R3448 | T4162 | T4135 | punct | .,were |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3423 | 96-98 | http://purl.obolibrary.org/obo/GO_0033968 | denotes | CA |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4178 | 12-22 | http://purl.obolibrary.org/obo/GO_0003823 | denotes | antibodies |
| T4179 | 96-98 | http://purl.obolibrary.org/obo/GO_0033968 | denotes | CA |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3438 | 38-43 | Protein | denotes | IRF-4 |
| T3439 | 44-49 | Protein | denotes | ICSAT |
| T3440 | 51-55 | Protein | denotes | M-17 |
| T3441 | 115-122 | Protein | denotes | β-actin |
| R2739 | T3439 | T3438 | equivalentTo | ICSAT,IRF-4 |
| R2740 | T3440 | T3438 | equivalentTo | M-17,IRF-4 |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3799 | 38-43 | Q15306 | denotes | IRF-4 |
| T3800 | 44-49 | Q99419 | denotes | ICSAT |
| T3801 | 115-122 | P60709 | denotes | β-actin |
test2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3404 | 38-43 | Protein | denotes | IRF-4 |
| T3405 | 44-49 | Protein | denotes | ICSAT |
| T3406 | 51-55 | Protein | denotes | M-17 |
| T3407 | 115-122 | Protein | denotes | β-actin |
| R2734 | T3405 | T3404 | equivalentTo | ICSAT,IRF-4 |
| R2735 | T3406 | T3404 | equivalentTo | M-17,IRF-4 |