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PMC:1310901 / 6735-6926 JSONTXT

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bionlp-st-ge-2016-reference-eval

Id Subject Object Predicate Lexical cue
T4319 116-131 Transcription denotes transcriptional
T4330 110-115 Protein denotes IRF-4
R3510 T4330 T4319 themeOf IRF-4,transcriptional

events-check-again

Id Subject Object Predicate Lexical cue
T4269 110-115 Protein denotes IRF-4
T4270 116-131 Transcription denotes transcriptional
R3488 T4269 T4270 themeOf IRF-4,transcriptional

GO-CC

Id Subject Object Predicate Lexical cue
T4180 162-167 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T3408 75-94 Sentence denotes Expression analysis
T51 75-94 Sentence denotes Expression analysis

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3178 7-18 NNP denotes Bio-systems
T3179 18-19 -COMMA- denotes ,
T3180 20-26 NNP denotes Foster
T3181 27-31 NNP denotes City
T3182 31-32 -COMMA- denotes ,
T3183 33-36 NNP denotes USA
T3184 36-37 -RRB- denotes )
T3185 38-40 IN denotes as
T3186 41-52 VB denotes recommended
T3187 53-55 IN denotes by
T3188 56-59 DT denotes the
T3189 60-72 NN denotes manufacturer
T3450 75-85 NN denotes Expression
T3451 86-94 NN denotes analysis
T3452 95-97 TO denotes To
T3453 98-105 VB denotes analyze
T3454 106-109 DT denotes the
T3455 110-115 NN denotes IRF-4
T3456 116-131 JJ denotes transcriptional
T3457 132-137 NN denotes level
T3458 137-138 -COMMA- denotes ,
T3459 139-142 NN denotes RNA
T3460 143-146 VB denotes was
T3461 147-156 VB denotes extracted
T3462 157-161 IN denotes from
T3463 162-167 NN denotes cells
T3464 168-173 VB denotes using
T3465 174-177 DT denotes the
T3466 178-188 JJ denotes commercial
R2552 T3179 T3182 arg1Of ",",","
R2553 T3179 T3183 arg1Of ",",USA
R2554 T3181 T3179 arg2Of City,","
R2555 T3181 T3180 arg1Of City,Foster
R2557 T3186 T3185 arg2Of recommended,as
R2558 T3189 T3186 arg1Of manufacturer,recommended
R2559 T3189 T3187 arg2Of manufacturer,by
R2560 T3189 T3188 arg1Of manufacturer,the
R2749 T3451 T3450 arg1Of analysis,Expression
R2750 T3453 T3452 arg1Of analyze,To
R2751 T3457 T3453 arg2Of level,analyze
R2752 T3457 T3454 arg1Of level,the
R2753 T3457 T3455 arg1Of level,IRF-4
R2754 T3457 T3456 arg1Of level,transcriptional
R2755 T3459 T3453 arg1Of RNA,analyze
R2756 T3459 T3460 arg1Of RNA,was
R2757 T3459 T3461 arg2Of RNA,extracted
R2758 T3461 T3452 modOf extracted,To
R2759 T3461 T3458 arg1Of extracted,","
R2760 T3461 T3460 arg2Of extracted,was
R2761 T3461 T3462 arg1Of extracted,from
R2762 T3463 T3462 arg2Of cells,from
R2763 T3463 T3464 arg1Of cells,using

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T3327 7-18 NNPS denotes Bio-systems
T3328 18-19 , denotes ,
T3329 20-26 NNP denotes Foster
T3330 27-31 NNP denotes City
T3331 31-32 , denotes ,
T3332 33-36 NNP denotes USA
T3333 36-37 -RRB- denotes )
T3334 38-40 IN denotes as
T3335 41-52 VBN denotes recommended
T3336 53-55 IN denotes by
T3337 56-59 DT denotes the
T3338 60-72 NN denotes manufacturer
T3339 72-73 . denotes .
T3802 75-85 NN denotes Expression
T3803 86-94 NN denotes analysis
T3804 95-97 TO denotes To
T3805 98-105 VB denotes analyze
T3806 106-109 DT denotes the
T3807 110-115 NN denotes IRF-4
T3808 116-131 JJ denotes transcriptional
T3809 132-137 NN denotes level
T3810 137-138 , denotes ,
T3811 139-142 NNP denotes RNA
T3812 143-146 VBD denotes was
T3813 147-156 VBN denotes extracted
T3814 157-161 IN denotes from
T3815 162-167 NNS denotes cells
T3816 168-173 VBG denotes using
T3817 174-177 DT denotes the
T3818 178-188 JJ denotes commercial
R2698 T3329 T3330 compound Foster,City
R2700 T3331 T3330 punct ",",City
R2701 T3332 T3330 npadvmod USA,City
R2703 T3334 T3335 mark as,recommended
R2705 T3336 T3335 agent by,recommended
R2706 T3337 T3338 det the,manufacturer
R2707 T3338 T3336 pobj manufacturer,by
R3088 T3802 T3803 compound Expression,analysis
R3089 T3803 T3813 nsubjpass analysis,extracted
R3090 T3804 T3805 aux To,analyze
R3091 T3805 T3813 advcl analyze,extracted
R3092 T3806 T3809 det the,level
R3093 T3807 T3809 nmod IRF-4,level
R3094 T3808 T3809 amod transcriptional,level
R3095 T3809 T3805 dobj level,analyze
R3096 T3810 T3813 punct ",",extracted
R3097 T3811 T3813 nsubjpass RNA,extracted
R3098 T3812 T3813 auxpass was,extracted
R3099 T3813 T3813 ROOT extracted,extracted
R3100 T3814 T3813 prep from,extracted
R3101 T3815 T3814 pobj cells,from
R3102 T3816 T3813 advcl using,extracted

GO-BP

Id Subject Object Predicate Lexical cue
T3421 116-131 http://purl.obolibrary.org/obo/GO_0006351 denotes transcriptional

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T4295 110-115 Protein denotes IRF-4

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T3424 116-131 Transcription denotes transcriptional
T3435 110-115 Protein denotes IRF-4
R2736 T3435 T3424 themeOf IRF-4,transcriptional

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3787 110-115 Q15306 denotes IRF-4

test2

Id Subject Object Predicate Lexical cue
T3389 110-115 Protein denotes IRF-4
T3390 116-131 Transcription denotes transcriptional
R2723 T3389 T3390 themeOf IRF-4,transcriptional