PMC:1310901 / 5481-5702
Annnotations
bionlp-st-ge-2016-reference-eval
{"project":"bionlp-st-ge-2016-reference-eval","denotations":[{"id":"T2852","span":{"begin":1,"end":9},"obj":"Gene_expression"},{"id":"T3045","span":{"begin":121,"end":126},"obj":"Protein"},{"id":"T3046","span":{"begin":127,"end":130},"obj":"Protein"}],"text":"-negative.\n\nCell culture and stimulation\nAll cell lines were maintained at 5% CO2 in RPMI 1640 medium with 1% glutamine (Gibco/BRL Eggenstein, Germany) supplemented with 10% fetal calf serum (Gibco/BRL), 1% penicillin/str"}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T2851","span":{"begin":1,"end":9},"obj":"Gene_expression"}],"attributes":[{"id":"M56","pred":"Negation","subj":"T2851","obj":"true"}],"text":"-negative.\n\nCell culture and stimulation\nAll cell lines were maintained at 5% CO2 in RPMI 1640 medium with 1% glutamine (Gibco/BRL Eggenstein, Germany) supplemented with 10% fetal calf serum (Gibco/BRL), 1% penicillin/str"}
GO-CC
{"project":"GO-CC","denotations":[{"id":"T3042","span":{"begin":12,"end":16},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T3043","span":{"begin":45,"end":49},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"-negative.\n\nCell culture and stimulation\nAll cell lines were maintained at 5% CO2 in RPMI 1640 medium with 1% glutamine (Gibco/BRL Eggenstein, Germany) supplemented with 10% fetal calf serum (Gibco/BRL), 1% penicillin/str"}
sentences
{"project":"sentences","denotations":[{"id":"T2858","span":{"begin":12,"end":40},"obj":"Sentence"},{"id":"T38","span":{"begin":12,"end":40},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"-negative.\n\nCell culture and stimulation\nAll cell lines were maintained at 5% CO2 in RPMI 1640 medium with 1% glutamine (Gibco/BRL Eggenstein, Germany) supplemented with 10% fetal calf serum (Gibco/BRL), 1% penicillin/str"}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T2862","span":{"begin":12,"end":16},"obj":"NN"},{"id":"T2863","span":{"begin":17,"end":24},"obj":"NN"},{"id":"T2864","span":{"begin":25,"end":28},"obj":"CC"},{"id":"T2865","span":{"begin":29,"end":40},"obj":"NN"},{"id":"T2866","span":{"begin":41,"end":44},"obj":"DT"},{"id":"T2867","span":{"begin":45,"end":49},"obj":"NN"},{"id":"T2868","span":{"begin":50,"end":55},"obj":"NN"},{"id":"T2869","span":{"begin":56,"end":60},"obj":"VB"},{"id":"T2870","span":{"begin":61,"end":71},"obj":"VB"},{"id":"T2871","span":{"begin":72,"end":74},"obj":"IN"},{"id":"T2872","span":{"begin":75,"end":76},"obj":"CD"},{"id":"T2873","span":{"begin":76,"end":77},"obj":"NN"},{"id":"T2874","span":{"begin":78,"end":81},"obj":"NN"},{"id":"T2875","span":{"begin":82,"end":84},"obj":"IN"},{"id":"T2876","span":{"begin":85,"end":89},"obj":"NN"},{"id":"T2877","span":{"begin":90,"end":94},"obj":"CD"},{"id":"T2878","span":{"begin":95,"end":101},"obj":"NN"},{"id":"T2879","span":{"begin":102,"end":106},"obj":"IN"},{"id":"T2880","span":{"begin":107,"end":108},"obj":"CD"},{"id":"T2881","span":{"begin":108,"end":109},"obj":"NN"},{"id":"T2882","span":{"begin":110,"end":119},"obj":"NN"},{"id":"T2883","span":{"begin":120,"end":121},"obj":"-LRB-"},{"id":"T2884","span":{"begin":121,"end":130},"obj":"NNP"},{"id":"T2885","span":{"begin":131,"end":141},"obj":"NNP"},{"id":"T2886","span":{"begin":141,"end":142},"obj":"-COMMA-"},{"id":"T2887","span":{"begin":143,"end":150},"obj":"NNP"},{"id":"T2888","span":{"begin":150,"end":151},"obj":"-RRB-"},{"id":"T2889","span":{"begin":152,"end":164},"obj":"VB"},{"id":"T2890","span":{"begin":165,"end":169},"obj":"IN"},{"id":"T2891","span":{"begin":170,"end":172},"obj":"CD"},{"id":"T2892","span":{"begin":172,"end":173},"obj":"NN"},{"id":"T2893","span":{"begin":174,"end":179},"obj":"JJ"},{"id":"T2894","span":{"begin":180,"end":184},"obj":"NN"},{"id":"T2895","span":{"begin":185,"end":190},"obj":"NN"},{"id":"T2896","span":{"begin":191,"end":192},"obj":"-LRB-"},{"id":"T2897","span":{"begin":192,"end":201},"obj":"NN"},{"id":"T2898","span":{"begin":201,"end":202},"obj":"-RRB-"},{"id":"T2899","span":{"begin":202,"end":203},"obj":"-COMMA-"},{"id":"T2900","span":{"begin":204,"end":205},"obj":"CD"},{"id":"T2901","span":{"begin":205,"end":206},"obj":"NN"}],"relations":[{"id":"R2263","pred":"arg1Of","subj":"T2863","obj":"T2864"},{"id":"R2264","pred":"arg1Of","subj":"T2864","obj":"T2862"},{"id":"R2265","pred":"arg2Of","subj":"T2865","obj":"T2864"},{"id":"R2266","pred":"arg1Of","subj":"T2868","obj":"T2866"},{"id":"R2267","pred":"arg1Of","subj":"T2868","obj":"T2867"},{"id":"R2268","pred":"arg1Of","subj":"T2868","obj":"T2869"},{"id":"R2269","pred":"arg2Of","subj":"T2868","obj":"T2870"},{"id":"R2270","pred":"arg2Of","subj":"T2870","obj":"T2869"},{"id":"R2271","pred":"arg1Of","subj":"T2870","obj":"T2871"},{"id":"R2272","pred":"arg1Of","subj":"T2872","obj":"T2873"},{"id":"R2273","pred":"arg2Of","subj":"T2874","obj":"T2871"},{"id":"R2274","pred":"arg1Of","subj":"T2874","obj":"T2872"},{"id":"R2275","pred":"arg1Of","subj":"T2874","obj":"T2875"},{"id":"R2276","pred":"arg1Of","subj":"T2874","obj":"T2879"},{"id":"R2277","pred":"arg2Of","subj":"T2874","obj":"T2889"},{"id":"R2278","pred":"arg2Of","subj":"T2878","obj":"T2875"},{"id":"R2279","pred":"arg1Of","subj":"T2878","obj":"T2876"},{"id":"R2280","pred":"arg1Of","subj":"T2878","obj":"T2877"},{"id":"R2281","pred":"arg1Of","subj":"T2880","obj":"T2881"},{"id":"R2282","pred":"arg2Of","subj":"T2882","obj":"T2879"},{"id":"R2283","pred":"arg1Of","subj":"T2882","obj":"T2880"},{"id":"R2284","pred":"arg1Of","subj":"T2882","obj":"T2883"},{"id":"R2285","pred":"arg2Of","subj":"T2885","obj":"T2883"},{"id":"R2286","pred":"arg1Of","subj":"T2885","obj":"T2884"},{"id":"R2287","pred":"arg1Of","subj":"T2885","obj":"T2886"},{"id":"R2288","pred":"arg2Of","subj":"T2887","obj":"T2886"},{"id":"R2289","pred":"arg3Of","subj":"T2888","obj":"T2883"},{"id":"R2290","pred":"arg1Of","subj":"T2889","obj":"T2890"},{"id":"R2292","pred":"arg1Of","subj":"T2891","obj":"T2892"},{"id":"R2293","pred":"arg1Of","subj":"T2895","obj":"T2891"},{"id":"R2294","pred":"arg1Of","subj":"T2895","obj":"T2893"},{"id":"R2295","pred":"arg1Of","subj":"T2895","obj":"T2894"},{"id":"R2296","pred":"arg1Of","subj":"T2895","obj":"T2896"},{"id":"R2297","pred":"arg1Of","subj":"T2895","obj":"T2899"},{"id":"R2298","pred":"arg2Of","subj":"T2897","obj":"T2896"},{"id":"R2299","pred":"arg3Of","subj":"T2898","obj":"T2896"},{"id":"R2300","pred":"arg2Of","subj":"T2899","obj":"T2890"},{"id":"R2301","pred":"arg1Of","subj":"T2900","obj":"T2901"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"-negative.\n\nCell culture and stimulation\nAll cell lines were maintained at 5% CO2 in RPMI 1640 medium with 1% glutamine (Gibco/BRL Eggenstein, Germany) supplemented with 10% fetal calf serum (Gibco/BRL), 1% penicillin/str"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T2838","span":{"begin":9,"end":10},"obj":"."},{"id":"T2949","span":{"begin":12,"end":16},"obj":"NNP"},{"id":"T2950","span":{"begin":17,"end":24},"obj":"NN"},{"id":"T2951","span":{"begin":25,"end":28},"obj":"CC"},{"id":"T2952","span":{"begin":29,"end":40},"obj":"NN"},{"id":"T2953","span":{"begin":41,"end":44},"obj":"DT"},{"id":"T2954","span":{"begin":45,"end":49},"obj":"NN"},{"id":"T2955","span":{"begin":50,"end":55},"obj":"NNS"},{"id":"T2956","span":{"begin":56,"end":60},"obj":"VBD"},{"id":"T2957","span":{"begin":61,"end":71},"obj":"VBN"},{"id":"T2958","span":{"begin":72,"end":74},"obj":"IN"},{"id":"T2959","span":{"begin":75,"end":76},"obj":"CD"},{"id":"T2960","span":{"begin":76,"end":77},"obj":"NN"},{"id":"T2961","span":{"begin":78,"end":81},"obj":"CD"},{"id":"T2962","span":{"begin":82,"end":84},"obj":"IN"},{"id":"T2963","span":{"begin":85,"end":89},"obj":"NNP"},{"id":"T2964","span":{"begin":90,"end":94},"obj":"CD"},{"id":"T2965","span":{"begin":95,"end":101},"obj":"NN"},{"id":"T2966","span":{"begin":102,"end":106},"obj":"IN"},{"id":"T2967","span":{"begin":107,"end":108},"obj":"CD"},{"id":"T2968","span":{"begin":108,"end":109},"obj":"NN"},{"id":"T2969","span":{"begin":110,"end":119},"obj":"NN"},{"id":"T2970","span":{"begin":120,"end":121},"obj":"-LRB-"},{"id":"T2971","span":{"begin":121,"end":130},"obj":"NNP"},{"id":"T2972","span":{"begin":131,"end":141},"obj":"NNP"},{"id":"T2973","span":{"begin":141,"end":142},"obj":","},{"id":"T2974","span":{"begin":143,"end":150},"obj":"NNP"},{"id":"T2975","span":{"begin":150,"end":151},"obj":"-RRB-"},{"id":"T2976","span":{"begin":152,"end":164},"obj":"VBN"},{"id":"T2977","span":{"begin":165,"end":169},"obj":"IN"},{"id":"T2978","span":{"begin":170,"end":172},"obj":"CD"},{"id":"T2979","span":{"begin":172,"end":173},"obj":"NN"},{"id":"T2980","span":{"begin":174,"end":179},"obj":"JJ"},{"id":"T2981","span":{"begin":180,"end":184},"obj":"NN"},{"id":"T2982","span":{"begin":185,"end":190},"obj":"NN"},{"id":"T2983","span":{"begin":191,"end":192},"obj":"-LRB-"},{"id":"T2984","span":{"begin":192,"end":201},"obj":"NNP"},{"id":"T2985","span":{"begin":201,"end":202},"obj":"-RRB-"},{"id":"T2986","span":{"begin":202,"end":203},"obj":","},{"id":"T2987","span":{"begin":204,"end":205},"obj":"CD"},{"id":"T2988","span":{"begin":205,"end":206},"obj":"NN"}],"relations":[{"id":"R2349","pred":"compound","subj":"T2949","obj":"T2950"},{"id":"R2350","pred":"nsubjpass","subj":"T2950","obj":"T2957"},{"id":"R2351","pred":"cc","subj":"T2951","obj":"T2950"},{"id":"R2352","pred":"conj","subj":"T2952","obj":"T2950"},{"id":"R2353","pred":"det","subj":"T2953","obj":"T2955"},{"id":"R2354","pred":"compound","subj":"T2954","obj":"T2955"},{"id":"R2355","pred":"nsubjpass","subj":"T2955","obj":"T2957"},{"id":"R2356","pred":"auxpass","subj":"T2956","obj":"T2957"},{"id":"R2357","pred":"ROOT","subj":"T2957","obj":"T2957"},{"id":"R2358","pred":"prep","subj":"T2958","obj":"T2957"},{"id":"R2359","pred":"nummod","subj":"T2959","obj":"T2960"},{"id":"R2360","pred":"pobj","subj":"T2960","obj":"T2958"},{"id":"R2361","pred":"nummod","subj":"T2961","obj":"T2960"},{"id":"R2362","pred":"prep","subj":"T2962","obj":"T2961"},{"id":"R2363","pred":"compound","subj":"T2963","obj":"T2965"},{"id":"R2364","pred":"compound","subj":"T2964","obj":"T2965"},{"id":"R2365","pred":"pobj","subj":"T2965","obj":"T2962"},{"id":"R2366","pred":"prep","subj":"T2966","obj":"T2957"},{"id":"R2367","pred":"nummod","subj":"T2967","obj":"T2968"},{"id":"R2368","pred":"compound","subj":"T2968","obj":"T2969"},{"id":"R2369","pred":"pobj","subj":"T2969","obj":"T2966"},{"id":"R2370","pred":"punct","subj":"T2970","obj":"T2969"},{"id":"R2371","pred":"compound","subj":"T2971","obj":"T2972"},{"id":"R2372","pred":"appos","subj":"T2972","obj":"T2969"},{"id":"R2373","pred":"punct","subj":"T2973","obj":"T2972"},{"id":"R2374","pred":"appos","subj":"T2974","obj":"T2972"},{"id":"R2375","pred":"punct","subj":"T2975","obj":"T2976"},{"id":"R2376","pred":"advcl","subj":"T2976","obj":"T2957"},{"id":"R2377","pred":"prep","subj":"T2977","obj":"T2976"},{"id":"R2378","pred":"nummod","subj":"T2978","obj":"T2979"},{"id":"R2379","pred":"compound","subj":"T2979","obj":"T2982"},{"id":"R2380","pred":"amod","subj":"T2980","obj":"T2981"},{"id":"R2381","pred":"compound","subj":"T2981","obj":"T2982"},{"id":"R2382","pred":"pobj","subj":"T2982","obj":"T2977"},{"id":"R2383","pred":"punct","subj":"T2983","obj":"T2982"},{"id":"R2384","pred":"appos","subj":"T2984","obj":"T2982"},{"id":"R2385","pred":"punct","subj":"T2985","obj":"T2982"},{"id":"R2386","pred":"punct","subj":"T2986","obj":"T2982"},{"id":"R2387","pred":"nummod","subj":"T2987","obj":"T2988"}],"text":"-negative.\n\nCell culture and stimulation\nAll cell lines were maintained at 5% CO2 in RPMI 1640 medium with 1% glutamine (Gibco/BRL Eggenstein, Germany) supplemented with 10% fetal calf serum (Gibco/BRL), 1% penicillin/str"}
UBERON-AE
{"project":"UBERON-AE","denotations":[{"id":"T2857","span":{"begin":185,"end":190},"obj":"http://purl.obolibrary.org/obo/UBERON_0001977"}],"text":"-negative.\n\nCell culture and stimulation\nAll cell lines were maintained at 5% CO2 in RPMI 1640 medium with 1% glutamine (Gibco/BRL Eggenstein, Germany) supplemented with 10% fetal calf serum (Gibco/BRL), 1% penicillin/str"}
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T2706","span":{"begin":1,"end":9},"obj":"Gene_expression"}],"attributes":[{"id":"M52","pred":"Negation","subj":"T2706","obj":"true"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"-negative.\n\nCell culture and stimulation\nAll cell lines were maintained at 5% CO2 in RPMI 1640 medium with 1% glutamine (Gibco/BRL Eggenstein, Germany) supplemented with 10% fetal calf serum (Gibco/BRL), 1% penicillin/str"}
test2
{"project":"test2","denotations":[{"id":"T2704","span":{"begin":1,"end":9},"obj":"Gene_expression"}],"text":"-negative.\n\nCell culture and stimulation\nAll cell lines were maintained at 5% CO2 in RPMI 1640 medium with 1% glutamine (Gibco/BRL Eggenstein, Germany) supplemented with 10% fetal calf serum (Gibco/BRL), 1% penicillin/str"}