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PMC:1310901 / 5481-5702 JSONTXT

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bionlp-st-ge-2016-reference-eval

Id Subject Object Predicate Lexical cue
T2852 1-9 Gene_expression denotes negative
T3045 121-126 Protein denotes Gibco
T3046 127-130 Protein denotes BRL

events-check-again

Id Subject Object Predicate Lexical cue Negation
T2851 1-9 Gene_expression denotes negative true

GO-CC

Id Subject Object Predicate Lexical cue
T3042 12-16 http://purl.obolibrary.org/obo/GO_0005623 denotes Cell
T3043 45-49 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T2858 12-40 Sentence denotes Cell culture and stimulation
T38 12-40 Sentence denotes Cell culture and stimulation

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T2862 12-16 NN denotes Cell
T2863 17-24 NN denotes culture
T2864 25-28 CC denotes and
T2865 29-40 NN denotes stimulation
T2866 41-44 DT denotes All
T2867 45-49 NN denotes cell
T2868 50-55 NN denotes lines
T2869 56-60 VB denotes were
T2870 61-71 VB denotes maintained
T2871 72-74 IN denotes at
T2872 75-76 CD denotes 5
T2873 76-77 NN denotes %
T2874 78-81 NN denotes CO2
T2875 82-84 IN denotes in
T2876 85-89 NN denotes RPMI
T2877 90-94 CD denotes 1640
T2878 95-101 NN denotes medium
T2879 102-106 IN denotes with
T2880 107-108 CD denotes 1
T2881 108-109 NN denotes %
T2882 110-119 NN denotes glutamine
T2883 120-121 -LRB- denotes (
T2884 121-130 NNP denotes Gibco/BRL
T2885 131-141 NNP denotes Eggenstein
T2886 141-142 -COMMA- denotes ,
T2887 143-150 NNP denotes Germany
T2888 150-151 -RRB- denotes )
T2889 152-164 VB denotes supplemented
T2890 165-169 IN denotes with
T2891 170-172 CD denotes 10
T2892 172-173 NN denotes %
T2893 174-179 JJ denotes fetal
T2894 180-184 NN denotes calf
T2895 185-190 NN denotes serum
T2896 191-192 -LRB- denotes (
T2897 192-201 NN denotes Gibco/BRL
T2898 201-202 -RRB- denotes )
T2899 202-203 -COMMA- denotes ,
T2900 204-205 CD denotes 1
T2901 205-206 NN denotes %
R2263 T2863 T2864 arg1Of culture,and
R2264 T2864 T2862 arg1Of and,Cell
R2265 T2865 T2864 arg2Of stimulation,and
R2266 T2868 T2866 arg1Of lines,All
R2267 T2868 T2867 arg1Of lines,cell
R2268 T2868 T2869 arg1Of lines,were
R2269 T2868 T2870 arg2Of lines,maintained
R2270 T2870 T2869 arg2Of maintained,were
R2271 T2870 T2871 arg1Of maintained,at
R2272 T2872 T2873 arg1Of 5,%
R2273 T2874 T2871 arg2Of CO2,at
R2274 T2874 T2872 arg1Of CO2,5
R2275 T2874 T2875 arg1Of CO2,in
R2276 T2874 T2879 arg1Of CO2,with
R2277 T2874 T2889 arg2Of CO2,supplemented
R2278 T2878 T2875 arg2Of medium,in
R2279 T2878 T2876 arg1Of medium,RPMI
R2280 T2878 T2877 arg1Of medium,1640
R2281 T2880 T2881 arg1Of 1,%
R2282 T2882 T2879 arg2Of glutamine,with
R2283 T2882 T2880 arg1Of glutamine,1
R2284 T2882 T2883 arg1Of glutamine,(
R2285 T2885 T2883 arg2Of Eggenstein,(
R2286 T2885 T2884 arg1Of Eggenstein,Gibco/BRL
R2287 T2885 T2886 arg1Of Eggenstein,","
R2288 T2887 T2886 arg2Of Germany,","
R2289 T2888 T2883 arg3Of ),(
R2290 T2889 T2890 arg1Of supplemented,with
R2292 T2891 T2892 arg1Of 10,%
R2293 T2895 T2891 arg1Of serum,10
R2294 T2895 T2893 arg1Of serum,fetal
R2295 T2895 T2894 arg1Of serum,calf
R2296 T2895 T2896 arg1Of serum,(
R2297 T2895 T2899 arg1Of serum,","
R2298 T2897 T2896 arg2Of Gibco/BRL,(
R2299 T2898 T2896 arg3Of ),(
R2300 T2899 T2890 arg2Of ",",with
R2301 T2900 T2901 arg1Of 1,%

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2838 9-10 . denotes .
T2949 12-16 NNP denotes Cell
T2950 17-24 NN denotes culture
T2951 25-28 CC denotes and
T2952 29-40 NN denotes stimulation
T2953 41-44 DT denotes All
T2954 45-49 NN denotes cell
T2955 50-55 NNS denotes lines
T2956 56-60 VBD denotes were
T2957 61-71 VBN denotes maintained
T2958 72-74 IN denotes at
T2959 75-76 CD denotes 5
T2960 76-77 NN denotes %
T2961 78-81 CD denotes CO2
T2962 82-84 IN denotes in
T2963 85-89 NNP denotes RPMI
T2964 90-94 CD denotes 1640
T2965 95-101 NN denotes medium
T2966 102-106 IN denotes with
T2967 107-108 CD denotes 1
T2968 108-109 NN denotes %
T2969 110-119 NN denotes glutamine
T2970 120-121 -LRB- denotes (
T2971 121-130 NNP denotes Gibco/BRL
T2972 131-141 NNP denotes Eggenstein
T2973 141-142 , denotes ,
T2974 143-150 NNP denotes Germany
T2975 150-151 -RRB- denotes )
T2976 152-164 VBN denotes supplemented
T2977 165-169 IN denotes with
T2978 170-172 CD denotes 10
T2979 172-173 NN denotes %
T2980 174-179 JJ denotes fetal
T2981 180-184 NN denotes calf
T2982 185-190 NN denotes serum
T2983 191-192 -LRB- denotes (
T2984 192-201 NNP denotes Gibco/BRL
T2985 201-202 -RRB- denotes )
T2986 202-203 , denotes ,
T2987 204-205 CD denotes 1
T2988 205-206 NN denotes %
R2349 T2949 T2950 compound Cell,culture
R2350 T2950 T2957 nsubjpass culture,maintained
R2351 T2951 T2950 cc and,culture
R2352 T2952 T2950 conj stimulation,culture
R2353 T2953 T2955 det All,lines
R2354 T2954 T2955 compound cell,lines
R2355 T2955 T2957 nsubjpass lines,maintained
R2356 T2956 T2957 auxpass were,maintained
R2357 T2957 T2957 ROOT maintained,maintained
R2358 T2958 T2957 prep at,maintained
R2359 T2959 T2960 nummod 5,%
R2360 T2960 T2958 pobj %,at
R2361 T2961 T2960 nummod CO2,%
R2362 T2962 T2961 prep in,CO2
R2363 T2963 T2965 compound RPMI,medium
R2364 T2964 T2965 compound 1640,medium
R2365 T2965 T2962 pobj medium,in
R2366 T2966 T2957 prep with,maintained
R2367 T2967 T2968 nummod 1,%
R2368 T2968 T2969 compound %,glutamine
R2369 T2969 T2966 pobj glutamine,with
R2370 T2970 T2969 punct (,glutamine
R2371 T2971 T2972 compound Gibco/BRL,Eggenstein
R2372 T2972 T2969 appos Eggenstein,glutamine
R2373 T2973 T2972 punct ",",Eggenstein
R2374 T2974 T2972 appos Germany,Eggenstein
R2375 T2975 T2976 punct ),supplemented
R2376 T2976 T2957 advcl supplemented,maintained
R2377 T2977 T2976 prep with,supplemented
R2378 T2978 T2979 nummod 10,%
R2379 T2979 T2982 compound %,serum
R2380 T2980 T2981 amod fetal,calf
R2381 T2981 T2982 compound calf,serum
R2382 T2982 T2977 pobj serum,with
R2383 T2983 T2982 punct (,serum
R2384 T2984 T2982 appos Gibco/BRL,serum
R2385 T2985 T2982 punct ),serum
R2386 T2986 T2982 punct ",",serum
R2387 T2987 T2988 nummod 1,%

UBERON-AE

Id Subject Object Predicate Lexical cue
T2857 185-190 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue Negation
T2706 1-9 Gene_expression denotes negative true

test2

Id Subject Object Predicate Lexical cue
T2704 1-9 Gene_expression denotes negative