PMC:1310901 / 4981-5160 JSONTXT

{"project":"bionlp-st-ge-2016-reference-eval","denotations":[{"id":"T2659","span":{"begin":103,"end":111},"obj":"Gene_expression"},{"id":"T2660","span":{"begin":117,"end":125},"obj":"Gene_expression"},{"id":"T2692","span":{"begin":23,"end":28},"obj":"Protein"},{"id":"T2693","span":{"begin":97,"end":102},"obj":"Protein"}],"relations":[{"id":"R2111","pred":"themeOf","subj":"T2693","obj":"T2659"},{"id":"R2112","pred":"themeOf","subj":"T2693","obj":"T2660"}],"text":"cells. We analyzed the IRF-4 promoter region for genetic aberrations and methylational status in IRF-4-positive and -negative hematopoietic cells.\n\nMATERIALS AND METHODS\n\nCell lin"}

{"project":"events-check-again","denotations":[{"id":"T2561","span":{"begin":23,"end":28},"obj":"Protein"},{"id":"T2562","span":{"begin":97,"end":102},"obj":"Protein"},{"id":"T2563","span":{"begin":103,"end":111},"obj":"Gene_expression"},{"id":"T2564","span":{"begin":117,"end":125},"obj":"Gene_expression"}],"relations":[{"id":"R2047","pred":"themeOf","subj":"T2562","obj":"T2563"},{"id":"R2048","pred":"themeOf","subj":"T2562","obj":"T2564"}],"attributes":[{"id":"M49","pred":"Negation","subj":"T2564","obj":"true"}],"text":"cells. We analyzed the IRF-4 promoter region for genetic aberrations and methylational status in IRF-4-positive and -negative hematopoietic cells.\n\nMATERIALS AND METHODS\n\nCell lin"}

{"project":"GO-CC","denotations":[{"id":"T2363","span":{"begin":0,"end":5},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T2364","span":{"begin":140,"end":145},"obj":"http://purl.obolibrary.org/obo/GO_0005623"},{"id":"T2842","span":{"begin":171,"end":175},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"cells. We analyzed the IRF-4 promoter region for genetic aberrations and methylational status in IRF-4-positive and -negative hematopoietic cells.\n\nMATERIALS AND METHODS\n\nCell lin"}

{"project":"sentences","denotations":[{"id":"T1075","span":{"begin":7,"end":146},"obj":"Sentence"},{"id":"T33","span":{"begin":7,"end":146},"obj":"Sentence"},{"id":"T34","span":{"begin":148,"end":169},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"cells. We analyzed the IRF-4 promoter region for genetic aberrations and methylational status in IRF-4-positive and -negative hematopoietic cells.\n\nMATERIALS AND METHODS\n\nCell lin"}

{"project":"pmc-enju-pas","denotations":[{"id":"T1654","span":{"begin":0,"end":5},"obj":"NN"},{"id":"T1655","span":{"begin":7,"end":9},"obj":"PRP"},{"id":"T1656","span":{"begin":10,"end":18},"obj":"VB"},{"id":"T1657","span":{"begin":19,"end":22},"obj":"DT"},{"id":"T1658","span":{"begin":23,"end":28},"obj":"NN"},{"id":"T1659","span":{"begin":29,"end":37},"obj":"NN"},{"id":"T1660","span":{"begin":38,"end":44},"obj":"NN"},{"id":"T1661","span":{"begin":45,"end":48},"obj":"IN"},{"id":"T1662","span":{"begin":49,"end":56},"obj":"JJ"},{"id":"T1663","span":{"begin":57,"end":68},"obj":"NN"},{"id":"T1664","span":{"begin":69,"end":72},"obj":"CC"},{"id":"T1665","span":{"begin":73,"end":86},"obj":"JJ"},{"id":"T1666","span":{"begin":87,"end":93},"obj":"NN"},{"id":"T1667","span":{"begin":94,"end":96},"obj":"IN"},{"id":"T1668","span":{"begin":97,"end":111},"obj":"JJ"},{"id":"T1669","span":{"begin":112,"end":115},"obj":"CC"},{"id":"T1670","span":{"begin":116,"end":125},"obj":"JJ"},{"id":"T1671","span":{"begin":126,"end":139},"obj":"JJ"},{"id":"T1672","span":{"begin":140,"end":145},"obj":"NN"},{"id":"T2710","span":{"begin":171,"end":175},"obj":"NN"}],"relations":[{"id":"R1330","pred":"arg1Of","subj":"T1655","obj":"T1656"},{"id":"R1331","pred":"arg1Of","subj":"T1656","obj":"T1661"},{"id":"R1332","pred":"arg2Of","subj":"T1660","obj":"T1656"},{"id":"R1333","pred":"arg1Of","subj":"T1660","obj":"T1657"},{"id":"R1334","pred":"arg1Of","subj":"T1660","obj":"T1658"},{"id":"R1335","pred":"arg1Of","subj":"T1660","obj":"T1659"},{"id":"R1336","pred":"arg1Of","subj":"T1663","obj":"T1662"},{"id":"R1337","pred":"arg1Of","subj":"T1663","obj":"T1664"},{"id":"R1338","pred":"arg2Of","subj":"T1664","obj":"T1661"},{"id":"R1339","pred":"arg1Of","subj":"T1664","obj":"T1667"},{"id":"R1340","pred":"arg2Of","subj":"T1666","obj":"T1664"},{"id":"R1341","pred":"arg1Of","subj":"T1666","obj":"T1665"},{"id":"R1342","pred":"arg1Of","subj":"T1668","obj":"T1669"},{"id":"R1343","pred":"arg2Of","subj":"T1670","obj":"T1669"},{"id":"R1344","pred":"arg2Of","subj":"T1672","obj":"T1667"},{"id":"R1345","pred":"arg1Of","subj":"T1672","obj":"T1668"},{"id":"R1346","pred":"arg1Of","subj":"T1672","obj":"T1670"},{"id":"R1347","pred":"arg1Of","subj":"T1672","obj":"T1671"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"cells. We analyzed the IRF-4 promoter region for genetic aberrations and methylational status in IRF-4-positive and -negative hematopoietic cells.\n\nMATERIALS AND METHODS\n\nCell lin"}

{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T2305","span":{"begin":0,"end":5},"obj":"NNS"},{"id":"T2306","span":{"begin":5,"end":6},"obj":"."},{"id":"T2307","span":{"begin":7,"end":9},"obj":"PRP"},{"id":"T2308","span":{"begin":10,"end":18},"obj":"VBD"},{"id":"T2309","span":{"begin":19,"end":22},"obj":"DT"},{"id":"T2310","span":{"begin":23,"end":28},"obj":"NN"},{"id":"T2311","span":{"begin":29,"end":37},"obj":"NN"},{"id":"T2312","span":{"begin":38,"end":44},"obj":"NN"},{"id":"T2313","span":{"begin":45,"end":48},"obj":"IN"},{"id":"T2314","span":{"begin":49,"end":56},"obj":"JJ"},{"id":"T2315","span":{"begin":57,"end":68},"obj":"NNS"},{"id":"T2316","span":{"begin":69,"end":72},"obj":"CC"},{"id":"T2317","span":{"begin":73,"end":86},"obj":"JJ"},{"id":"T2318","span":{"begin":87,"end":93},"obj":"NN"},{"id":"T2319","span":{"begin":94,"end":96},"obj":"IN"},{"id":"T2320","span":{"begin":97,"end":111},"obj":"JJ"},{"id":"T2321","span":{"begin":112,"end":115},"obj":"CC"},{"id":"T2322","span":{"begin":116,"end":117},"obj":":"},{"id":"T2323","span":{"begin":117,"end":125},"obj":"JJ"},{"id":"T2324","span":{"begin":126,"end":139},"obj":"JJ"},{"id":"T2325","span":{"begin":140,"end":145},"obj":"NNS"},{"id":"T2326","span":{"begin":145,"end":146},"obj":"."},{"id":"T2774","span":{"begin":171,"end":175},"obj":"NN"}],"relations":[{"id":"R1899","pred":"nsubj","subj":"T2307","obj":"T2308"},{"id":"R1901","pred":"ROOT","subj":"T2308","obj":"T2308"},{"id":"R1902","pred":"det","subj":"T2309","obj":"T2312"},{"id":"R1904","pred":"amod","subj":"T2310","obj":"T2312"},{"id":"R1905","pred":"compound","subj":"T2311","obj":"T2312"},{"id":"R1906","pred":"dobj","subj":"T2312","obj":"T2308"},{"id":"R1908","pred":"prep","subj":"T2313","obj":"T2308"},{"id":"R1909","pred":"amod","subj":"T2314","obj":"T2315"},{"id":"R1910","pred":"pobj","subj":"T2315","obj":"T2313"},{"id":"R1911","pred":"cc","subj":"T2316","obj":"T2315"},{"id":"R1912","pred":"amod","subj":"T2317","obj":"T2318"},{"id":"R1913","pred":"conj","subj":"T2318","obj":"T2315"},{"id":"R1915","pred":"prep","subj":"T2319","obj":"T2315"},{"id":"R1916","pred":"pobj","subj":"T2320","obj":"T2319"},{"id":"R1917","pred":"cc","subj":"T2321","obj":"T2308"},{"id":"R1919","pred":"punct","subj":"T2322","obj":"T2325"},{"id":"R1920","pred":"amod","subj":"T2323","obj":"T2325"},{"id":"R1921","pred":"amod","subj":"T2324","obj":"T2325"},{"id":"R1923","pred":"conj","subj":"T2325","obj":"T2308"},{"id":"R1925","pred":"punct","subj":"T2326","obj":"T2308"}],"text":"cells. We analyzed the IRF-4 promoter region for genetic aberrations and methylational status in IRF-4-positive and -negative hematopoietic cells.\n\nMATERIALS AND METHODS\n\nCell lin"}

{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T2648","span":{"begin":23,"end":44},"obj":"Protein"},{"id":"T2649","span":{"begin":116,"end":125},"obj":"Gene_expression"}],"relations":[{"id":"R2127","pred":"themeOf","subj":"T2648","obj":"T2649"}],"text":"cells. We analyzed the IRF-4 promoter region for genetic aberrations and methylational status in IRF-4-positive and -negative hematopoietic cells.\n\nMATERIALS AND METHODS\n\nCell lin"}

{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T1050","span":{"begin":23,"end":28},"obj":"Protein"},{"id":"T1051","span":{"begin":97,"end":102},"obj":"Protein"},{"id":"T1052","span":{"begin":103,"end":111},"obj":"Gene_expression"},{"id":"T1053","span":{"begin":117,"end":125},"obj":"Gene_expression"}],"relations":[{"id":"R770","pred":"themeOf","subj":"T1051","obj":"T1052"},{"id":"R771","pred":"themeOf","subj":"T1051","obj":"T1053"}],"attributes":[{"id":"M41","pred":"Negation","subj":"T1053","obj":"true"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"cells. We analyzed the IRF-4 promoter region for genetic aberrations and methylational status in IRF-4-positive and -negative hematopoietic cells.\n\nMATERIALS AND METHODS\n\nCell lin"}

{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1723","span":{"begin":23,"end":28},"obj":"Q15306"},{"id":"T1724","span":{"begin":97,"end":102},"obj":"Q15306"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"cells. We analyzed the IRF-4 promoter region for genetic aberrations and methylational status in IRF-4-positive and -negative hematopoietic cells.\n\nMATERIALS AND METHODS\n\nCell lin"}

{"project":"test2","denotations":[{"id":"T1000","span":{"begin":23,"end":28},"obj":"Protein"},{"id":"T1001","span":{"begin":97,"end":102},"obj":"Protein"},{"id":"T1002","span":{"begin":103,"end":111},"obj":"Gene_expression"},{"id":"T1003","span":{"begin":117,"end":125},"obj":"Gene_expression"}],"relations":[{"id":"R745","pred":"themeOf","subj":"T1001","obj":"T1003"},{"id":"R746","pred":"themeOf","subj":"T1001","obj":"T1002"}],"text":"cells. We analyzed the IRF-4 promoter region for genetic aberrations and methylational status in IRF-4-positive and -negative hematopoietic cells.\n\nMATERIALS AND METHODS\n\nCell lin"}