PMC:1310901 / 341-518
Annnotations
bionlp-st-ge-2016-reference-eval
{"project":"bionlp-st-ge-2016-reference-eval","denotations":[{"id":"T874","span":{"begin":37,"end":67},"obj":"Protein"},{"id":"T875","span":{"begin":69,"end":74},"obj":"Protein"}],"relations":[{"id":"R633","pred":"equivalentTo","subj":"T875","obj":"T874"}],"text":"es, such as the transcription factor interferon regulatory factor 4 (IRF-4), is also implicated in the pathogenesis of CML. Promoter methylation of CpG target sites or direct de"}
events-check-again
{"project":"events-check-again","denotations":[{"id":"T811","span":{"begin":69,"end":74},"obj":"Protein"},{"id":"T810","span":{"begin":37,"end":67},"obj":"Protein"}],"relations":[{"id":"R600","pred":"equivalentTo","subj":"T811","obj":"T810"}],"text":"es, such as the transcription factor interferon regulatory factor 4 (IRF-4), is also implicated in the pathogenesis of CML. Promoter methylation of CpG target sites or direct de"}
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T181","span":{"begin":2,"end":3},"obj":"-COMMA-"},{"id":"T182","span":{"begin":4,"end":8},"obj":"JJ"},{"id":"T183","span":{"begin":9,"end":11},"obj":"IN"},{"id":"T184","span":{"begin":12,"end":15},"obj":"DT"},{"id":"T185","span":{"begin":16,"end":29},"obj":"NN"},{"id":"T186","span":{"begin":30,"end":36},"obj":"NN"},{"id":"T187","span":{"begin":37,"end":47},"obj":"NN"},{"id":"T188","span":{"begin":48,"end":58},"obj":"JJ"},{"id":"T189","span":{"begin":59,"end":65},"obj":"NN"},{"id":"T190","span":{"begin":66,"end":67},"obj":"CD"},{"id":"T191","span":{"begin":68,"end":69},"obj":"-LRB-"},{"id":"T192","span":{"begin":69,"end":74},"obj":"NN"},{"id":"T193","span":{"begin":74,"end":75},"obj":"-RRB-"},{"id":"T194","span":{"begin":75,"end":76},"obj":"-COMMA-"},{"id":"T195","span":{"begin":77,"end":79},"obj":"VB"},{"id":"T196","span":{"begin":80,"end":84},"obj":"RB"},{"id":"T197","span":{"begin":85,"end":95},"obj":"VB"},{"id":"T198","span":{"begin":96,"end":98},"obj":"IN"},{"id":"T199","span":{"begin":99,"end":102},"obj":"DT"},{"id":"T200","span":{"begin":103,"end":115},"obj":"NN"},{"id":"T201","span":{"begin":116,"end":118},"obj":"IN"},{"id":"T202","span":{"begin":119,"end":122},"obj":"NN"},{"id":"T203","span":{"begin":124,"end":132},"obj":"NN"},{"id":"T204","span":{"begin":133,"end":144},"obj":"NN"},{"id":"T205","span":{"begin":145,"end":147},"obj":"IN"},{"id":"T206","span":{"begin":148,"end":151},"obj":"NN"},{"id":"T207","span":{"begin":152,"end":158},"obj":"NN"},{"id":"T208","span":{"begin":159,"end":164},"obj":"NN"},{"id":"T209","span":{"begin":165,"end":167},"obj":"CC"},{"id":"T210","span":{"begin":168,"end":174},"obj":"JJ"}],"relations":[{"id":"R96","pred":"arg1Of","subj":"T183","obj":"T182"},{"id":"R97","pred":"arg2Of","subj":"T189","obj":"T183"},{"id":"R98","pred":"arg1Of","subj":"T189","obj":"T184"},{"id":"R99","pred":"arg1Of","subj":"T189","obj":"T185"},{"id":"R100","pred":"arg1Of","subj":"T189","obj":"T186"},{"id":"R101","pred":"arg1Of","subj":"T189","obj":"T187"},{"id":"R102","pred":"arg1Of","subj":"T189","obj":"T188"},{"id":"R114","pred":"arg1Of","subj":"T200","obj":"T199"},{"id":"R115","pred":"arg1Of","subj":"T200","obj":"T201"},{"id":"R116","pred":"arg2Of","subj":"T202","obj":"T201"},{"id":"R117","pred":"arg1Of","subj":"T204","obj":"T203"},{"id":"R118","pred":"arg1Of","subj":"T204","obj":"T205"},{"id":"R120","pred":"arg1Of","subj":"T208","obj":"T206"},{"id":"R121","pred":"arg1Of","subj":"T208","obj":"T207"},{"id":"R122","pred":"arg1Of","subj":"T208","obj":"T209"},{"id":"R123","pred":"arg2Of","subj":"T209","obj":"T205"},{"id":"R103","pred":"arg1Of","subj":"T189","obj":"T190"},{"id":"R104","pred":"arg1Of","subj":"T189","obj":"T191"},{"id":"R105","pred":"arg2Of","subj":"T192","obj":"T191"},{"id":"R106","pred":"arg3Of","subj":"T193","obj":"T191"},{"id":"R109","pred":"arg1Of","subj":"T197","obj":"T194"},{"id":"R110","pred":"arg2Of","subj":"T197","obj":"T195"},{"id":"R111","pred":"arg1Of","subj":"T197","obj":"T196"},{"id":"R112","pred":"arg1Of","subj":"T197","obj":"T198"},{"id":"R113","pred":"arg2Of","subj":"T200","obj":"T198"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"es, such as the transcription factor interferon regulatory factor 4 (IRF-4), is also implicated in the pathogenesis of CML. Promoter methylation of CpG target sites or direct de"}
bionlp-st-ge-2016-coref
{"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T387","span":{"begin":37,"end":67},"obj":"Antecedent"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"es, such as the transcription factor interferon regulatory factor 4 (IRF-4), is also implicated in the pathogenesis of CML. Promoter methylation of CpG target sites or direct de"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T472","span":{"begin":2,"end":3},"obj":","},{"id":"T473","span":{"begin":4,"end":8},"obj":"JJ"},{"id":"T474","span":{"begin":9,"end":11},"obj":"IN"},{"id":"T475","span":{"begin":12,"end":15},"obj":"DT"},{"id":"T476","span":{"begin":16,"end":29},"obj":"NN"},{"id":"T477","span":{"begin":30,"end":36},"obj":"NN"},{"id":"T478","span":{"begin":37,"end":47},"obj":"NN"},{"id":"T479","span":{"begin":48,"end":58},"obj":"JJ"},{"id":"T480","span":{"begin":59,"end":65},"obj":"NN"},{"id":"T481","span":{"begin":66,"end":67},"obj":"CD"},{"id":"T482","span":{"begin":68,"end":69},"obj":"-LRB-"},{"id":"T483","span":{"begin":69,"end":74},"obj":"NN"},{"id":"T484","span":{"begin":74,"end":75},"obj":"-RRB-"},{"id":"T485","span":{"begin":75,"end":76},"obj":","},{"id":"T486","span":{"begin":77,"end":79},"obj":"VBZ"},{"id":"T487","span":{"begin":80,"end":84},"obj":"RB"},{"id":"T488","span":{"begin":85,"end":95},"obj":"VBN"},{"id":"T489","span":{"begin":96,"end":98},"obj":"IN"},{"id":"T490","span":{"begin":99,"end":102},"obj":"DT"},{"id":"T491","span":{"begin":103,"end":115},"obj":"NN"},{"id":"T492","span":{"begin":116,"end":118},"obj":"IN"},{"id":"T493","span":{"begin":119,"end":122},"obj":"NNP"},{"id":"T494","span":{"begin":122,"end":123},"obj":"."},{"id":"T495","span":{"begin":124,"end":132},"obj":"NN"},{"id":"T496","span":{"begin":133,"end":144},"obj":"NN"},{"id":"T497","span":{"begin":145,"end":147},"obj":"IN"},{"id":"T498","span":{"begin":148,"end":151},"obj":"NNP"},{"id":"T499","span":{"begin":152,"end":158},"obj":"NN"},{"id":"T500","span":{"begin":159,"end":164},"obj":"NNS"},{"id":"T501","span":{"begin":165,"end":167},"obj":"CC"},{"id":"T502","span":{"begin":168,"end":174},"obj":"JJ"}],"relations":[{"id":"R362","pred":"amod","subj":"T473","obj":"T474"},{"id":"R364","pred":"det","subj":"T475","obj":"T480"},{"id":"R365","pred":"compound","subj":"T476","obj":"T477"},{"id":"R366","pred":"nmod","subj":"T477","obj":"T480"},{"id":"R367","pred":"nmod","subj":"T478","obj":"T480"},{"id":"R368","pred":"amod","subj":"T479","obj":"T480"},{"id":"R369","pred":"pobj","subj":"T480","obj":"T474"},{"id":"R370","pred":"nummod","subj":"T481","obj":"T480"},{"id":"R371","pred":"punct","subj":"T482","obj":"T480"},{"id":"R372","pred":"appos","subj":"T483","obj":"T480"},{"id":"R373","pred":"punct","subj":"T484","obj":"T480"},{"id":"R374","pred":"punct","subj":"T485","obj":"T486"},{"id":"R375","pred":"auxpass","subj":"T486","obj":"T488"},{"id":"R376","pred":"advmod","subj":"T487","obj":"T488"},{"id":"R378","pred":"prep","subj":"T489","obj":"T488"},{"id":"R379","pred":"det","subj":"T490","obj":"T491"},{"id":"R380","pred":"pobj","subj":"T491","obj":"T489"},{"id":"R381","pred":"prep","subj":"T492","obj":"T491"},{"id":"R382","pred":"pobj","subj":"T493","obj":"T492"},{"id":"R384","pred":"compound","subj":"T495","obj":"T496"},{"id":"R386","pred":"prep","subj":"T497","obj":"T496"},{"id":"R387","pred":"compound","subj":"T498","obj":"T500"},{"id":"R388","pred":"compound","subj":"T499","obj":"T500"},{"id":"R389","pred":"pobj","subj":"T500","obj":"T497"},{"id":"R390","pred":"cc","subj":"T501","obj":"T500"}],"text":"es, such as the transcription factor interferon regulatory factor 4 (IRF-4), is also implicated in the pathogenesis of CML. Promoter methylation of CpG target sites or direct de"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T119","span":{"begin":16,"end":29},"obj":"http://purl.obolibrary.org/obo/GO_0006351"},{"id":"T121","span":{"begin":103,"end":115},"obj":"http://purl.obolibrary.org/obo/GO_0009405"},{"id":"T122","span":{"begin":133,"end":144},"obj":"http://purl.obolibrary.org/obo/GO_0032259"}],"text":"es, such as the transcription factor interferon regulatory factor 4 (IRF-4), is also implicated in the pathogenesis of CML. Promoter methylation of CpG target sites or direct de"}
bionlp-st-ge-2016-reference-tees
{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T843","span":{"begin":37,"end":67},"obj":"Protein"},{"id":"T844","span":{"begin":69,"end":74},"obj":"Protein"}],"text":"es, such as the transcription factor interferon regulatory factor 4 (IRF-4), is also implicated in the pathogenesis of CML. Promoter methylation of CpG target sites or direct de"}
bionlp-st-ge-2016-reference
{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T77","span":{"begin":37,"end":67},"obj":"Protein"},{"id":"T78","span":{"begin":69,"end":74},"obj":"Protein"}],"relations":[{"id":"R651","pred":"equivalentTo","subj":"T78","obj":"T77"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"es, such as the transcription factor interferon regulatory factor 4 (IRF-4), is also implicated in the pathogenesis of CML. Promoter methylation of CpG target sites or direct de"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T395","span":{"begin":37,"end":67},"obj":"Q92985"},{"id":"T396","span":{"begin":37,"end":67},"obj":"Q13568"},{"id":"T397","span":{"begin":37,"end":67},"obj":"Q14653"},{"id":"T398","span":{"begin":37,"end":67},"obj":"Q15306"},{"id":"T399","span":{"begin":37,"end":67},"obj":"Q02556"},{"id":"T400","span":{"begin":69,"end":74},"obj":"Q15306"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"es, such as the transcription factor interferon regulatory factor 4 (IRF-4), is also implicated in the pathogenesis of CML. Promoter methylation of CpG target sites or direct de"}
test2
{"project":"test2","denotations":[{"id":"T41","span":{"begin":37,"end":67},"obj":"Protein"},{"id":"T42","span":{"begin":69,"end":74},"obj":"Protein"}],"relations":[{"id":"R22","pred":"equivalentTo","subj":"T42","obj":"T41"}],"text":"es, such as the transcription factor interferon regulatory factor 4 (IRF-4), is also implicated in the pathogenesis of CML. Promoter methylation of CpG target sites or direct de"}