PMC:1310901 / 2923-3023 JSONTXT

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    bionlp-st-ge-2016-reference-eval

    {"project":"bionlp-st-ge-2016-reference-eval","denotations":[{"id":"T2665","span":{"begin":79,"end":89},"obj":"Gene_expression"},{"id":"T2670","span":{"begin":28,"end":31},"obj":"Protein"},{"id":"T2671","span":{"begin":32,"end":36},"obj":"Protein"},{"id":"T2672","span":{"begin":37,"end":42},"obj":"Protein"},{"id":"T2698","span":{"begin":15,"end":20},"obj":"Protein"},{"id":"T2699","span":{"begin":22,"end":27},"obj":"Protein"}],"relations":[{"id":"R2087","pred":"equivalentTo","subj":"T2670","obj":"T2698"},{"id":"R2088","pred":"equivalentTo","subj":"T2671","obj":"T2698"},{"id":"R2089","pred":"equivalentTo","subj":"T2672","obj":"T2698"},{"id":"R2118","pred":"themeOf","subj":"T2698","obj":"T2665"},{"id":"R2120","pred":"equivalentTo","subj":"T2699","obj":"T2698"}],"text":"uration (4–6). IRF-4 (ICSAT/Pip/MUM1/LSIRF) is one member with very restricted expression pattern: P"}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T2527","span":{"begin":15,"end":20},"obj":"Protein"},{"id":"T2528","span":{"begin":22,"end":27},"obj":"Protein"},{"id":"T2529","span":{"begin":28,"end":31},"obj":"Protein"},{"id":"T2530","span":{"begin":32,"end":36},"obj":"Protein"},{"id":"T2531","span":{"begin":37,"end":42},"obj":"Protein"},{"id":"T2532","span":{"begin":79,"end":89},"obj":"Gene_expression"}],"relations":[{"id":"R2032","pred":"themeOf","subj":"T2527","obj":"T2532"},{"id":"R2033","pred":"equivalentTo","subj":"T2528","obj":"T2527"},{"id":"R2034","pred":"equivalentTo","subj":"T2529","obj":"T2527"},{"id":"R2035","pred":"equivalentTo","subj":"T2530","obj":"T2527"},{"id":"R2036","pred":"equivalentTo","subj":"T2531","obj":"T2527"}],"text":"uration (4–6). IRF-4 (ICSAT/Pip/MUM1/LSIRF) is one member with very restricted expression pattern: P"}

    sentences

    {"project":"sentences","denotations":[{"id":"T1061","span":{"begin":15,"end":98},"obj":"Sentence"},{"id":"T19","span":{"begin":15,"end":98},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"uration (4–6). IRF-4 (ICSAT/Pip/MUM1/LSIRF) is one member with very restricted expression pattern: P"}

    2_test

    {"project":"2_test","denotations":[{"id":"16396836-9620643-76538167","span":{"begin":9,"end":10},"obj":"9620643"},{"id":"16396836-10936058-76538167","span":{"begin":9,"end":10},"obj":"10936058"},{"id":"16396836-11244049-76538167","span":{"begin":9,"end":10},"obj":"11244049"}],"text":"uration (4–6). IRF-4 (ICSAT/Pip/MUM1/LSIRF) is one member with very restricted expression pattern: P"}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T1298","span":{"begin":8,"end":9},"obj":"-LRB-"},{"id":"T1299","span":{"begin":9,"end":12},"obj":"CD"},{"id":"T1300","span":{"begin":12,"end":13},"obj":"-RRB-"},{"id":"T1301","span":{"begin":15,"end":20},"obj":"NN"},{"id":"T1302","span":{"begin":21,"end":22},"obj":"-LRB-"},{"id":"T1303","span":{"begin":22,"end":42},"obj":"NN"},{"id":"T1304","span":{"begin":42,"end":43},"obj":"-RRB-"},{"id":"T1305","span":{"begin":44,"end":46},"obj":"VB"},{"id":"T1306","span":{"begin":47,"end":50},"obj":"CD"},{"id":"T1307","span":{"begin":51,"end":57},"obj":"NN"},{"id":"T1308","span":{"begin":58,"end":62},"obj":"IN"},{"id":"T1309","span":{"begin":63,"end":67},"obj":"RB"},{"id":"T1310","span":{"begin":68,"end":78},"obj":"JJ"},{"id":"T1311","span":{"begin":79,"end":89},"obj":"NN"},{"id":"T1312","span":{"begin":90,"end":97},"obj":"NN"},{"id":"T1313","span":{"begin":97,"end":98},"obj":"-COLON-"}],"relations":[{"id":"R965","pred":"arg2Of","subj":"T1299","obj":"T1298"},{"id":"R966","pred":"arg3Of","subj":"T1300","obj":"T1298"},{"id":"R967","pred":"arg1Of","subj":"T1301","obj":"T1302"},{"id":"R968","pred":"arg1Of","subj":"T1301","obj":"T1305"},{"id":"R969","pred":"arg2Of","subj":"T1303","obj":"T1302"},{"id":"R970","pred":"arg3Of","subj":"T1304","obj":"T1302"},{"id":"R971","pred":"arg2Of","subj":"T1307","obj":"T1305"},{"id":"R972","pred":"arg1Of","subj":"T1307","obj":"T1306"},{"id":"R973","pred":"arg1Of","subj":"T1307","obj":"T1308"},{"id":"R974","pred":"arg1Of","subj":"T1307","obj":"T1313"},{"id":"R975","pred":"arg1Of","subj":"T1310","obj":"T1309"},{"id":"R976","pred":"arg2Of","subj":"T1312","obj":"T1308"},{"id":"R977","pred":"arg1Of","subj":"T1312","obj":"T1310"},{"id":"R978","pred":"arg1Of","subj":"T1312","obj":"T1311"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"uration (4–6). IRF-4 (ICSAT/Pip/MUM1/LSIRF) is one member with very restricted expression pattern: P"}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T1926","span":{"begin":8,"end":9},"obj":"-LRB-"},{"id":"T1927","span":{"begin":9,"end":10},"obj":"CD"},{"id":"T1928","span":{"begin":11,"end":12},"obj":"CD"},{"id":"T1929","span":{"begin":12,"end":13},"obj":"-RRB-"},{"id":"T1930","span":{"begin":13,"end":14},"obj":"."},{"id":"T1931","span":{"begin":15,"end":20},"obj":"NN"},{"id":"T1932","span":{"begin":21,"end":22},"obj":"-LRB-"},{"id":"T1933","span":{"begin":22,"end":36},"obj":"JJ"},{"id":"T1934","span":{"begin":36,"end":37},"obj":"NN"},{"id":"T1935","span":{"begin":37,"end":42},"obj":"NNP"},{"id":"T1936","span":{"begin":42,"end":43},"obj":"-RRB-"},{"id":"T1937","span":{"begin":44,"end":46},"obj":"VBZ"},{"id":"T1938","span":{"begin":47,"end":50},"obj":"CD"},{"id":"T1939","span":{"begin":51,"end":57},"obj":"NN"},{"id":"T1940","span":{"begin":58,"end":62},"obj":"IN"},{"id":"T1941","span":{"begin":63,"end":67},"obj":"RB"},{"id":"T1942","span":{"begin":68,"end":78},"obj":"VBN"},{"id":"T1943","span":{"begin":79,"end":89},"obj":"NN"},{"id":"T1944","span":{"begin":90,"end":97},"obj":"NN"},{"id":"T1945","span":{"begin":97,"end":98},"obj":":"}],"relations":[{"id":"R1589","pred":"nsubj","subj":"T1931","obj":"T1937"},{"id":"R1593","pred":"punct","subj":"T1932","obj":"T1935"},{"id":"R1596","pred":"amod","subj":"T1933","obj":"T1934"},{"id":"R1601","pred":"compound","subj":"T1934","obj":"T1935"},{"id":"R1608","pred":"appos","subj":"T1935","obj":"T1931"},{"id":"R1612","pred":"punct","subj":"T1936","obj":"T1935"},{"id":"R1616","pred":"ROOT","subj":"T1937","obj":"T1937"},{"id":"R1619","pred":"nummod","subj":"T1938","obj":"T1939"},{"id":"R1623","pred":"attr","subj":"T1939","obj":"T1937"},{"id":"R1626","pred":"prep","subj":"T1940","obj":"T1939"},{"id":"R1627","pred":"advmod","subj":"T1941","obj":"T1942"},{"id":"R1629","pred":"amod","subj":"T1942","obj":"T1944"},{"id":"R1630","pred":"compound","subj":"T1943","obj":"T1944"},{"id":"R1632","pred":"pobj","subj":"T1944","obj":"T1940"},{"id":"R1633","pred":"punct","subj":"T1945","obj":"T1937"}],"text":"uration (4–6). IRF-4 (ICSAT/Pip/MUM1/LSIRF) is one member with very restricted expression pattern: P"}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T2590","span":{"begin":15,"end":20},"obj":"Protein"},{"id":"T2591","span":{"begin":22,"end":27},"obj":"Protein"},{"id":"T2592","span":{"begin":28,"end":31},"obj":"Protein"},{"id":"T2593","span":{"begin":32,"end":36},"obj":"Protein"},{"id":"T2594","span":{"begin":37,"end":42},"obj":"Protein"},{"id":"T2596","span":{"begin":79,"end":89},"obj":"Gene_expression"},{"id":"T2597","span":{"begin":79,"end":89},"obj":"Gene_expression"},{"id":"T2598","span":{"begin":79,"end":89},"obj":"Gene_expression"},{"id":"T2599","span":{"begin":79,"end":89},"obj":"Gene_expression"},{"id":"T2600","span":{"begin":79,"end":89},"obj":"Gene_expression"}],"relations":[{"id":"R2050","pred":"themeOf","subj":"T2590","obj":"T2596"},{"id":"R2051","pred":"themeOf","subj":"T2591","obj":"T2597"},{"id":"R2054","pred":"themeOf","subj":"T2592","obj":"T2598"},{"id":"R2057","pred":"themeOf","subj":"T2593","obj":"T2599"},{"id":"R2058","pred":"themeOf","subj":"T2594","obj":"T2600"}],"text":"uration (4–6). IRF-4 (ICSAT/Pip/MUM1/LSIRF) is one member with very restricted expression pattern: P"}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T1016","span":{"begin":15,"end":20},"obj":"Protein"},{"id":"T1017","span":{"begin":22,"end":27},"obj":"Protein"},{"id":"T1018","span":{"begin":28,"end":31},"obj":"Protein"},{"id":"T1019","span":{"begin":32,"end":36},"obj":"Protein"},{"id":"T1020","span":{"begin":37,"end":42},"obj":"Protein"},{"id":"T1021","span":{"begin":79,"end":89},"obj":"Gene_expression"}],"relations":[{"id":"R754","pred":"themeOf","subj":"T1016","obj":"T1021"},{"id":"R755","pred":"equivalentTo","subj":"T1017","obj":"T1016"},{"id":"R756","pred":"equivalentTo","subj":"T1018","obj":"T1016"},{"id":"R757","pred":"equivalentTo","subj":"T1019","obj":"T1016"},{"id":"R758","pred":"equivalentTo","subj":"T1020","obj":"T1016"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"uration (4–6). IRF-4 (ICSAT/Pip/MUM1/LSIRF) is one member with very restricted expression pattern: P"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T1689","span":{"begin":15,"end":20},"obj":"Q15306"},{"id":"T1690","span":{"begin":22,"end":27},"obj":"Q99419"},{"id":"T1691","span":{"begin":28,"end":31},"obj":"P12273"},{"id":"T1692","span":{"begin":32,"end":36},"obj":"Q15306"},{"id":"T1693","span":{"begin":32,"end":36},"obj":"Q2TAK8"},{"id":"T1694","span":{"begin":37,"end":42},"obj":"Q15306"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"uration (4–6). IRF-4 (ICSAT/Pip/MUM1/LSIRF) is one member with very restricted expression pattern: P"}

    test2

    {"project":"test2","denotations":[{"id":"T964","span":{"begin":15,"end":20},"obj":"Protein"},{"id":"T965","span":{"begin":22,"end":27},"obj":"Protein"},{"id":"T966","span":{"begin":28,"end":31},"obj":"Protein"},{"id":"T967","span":{"begin":32,"end":36},"obj":"Protein"},{"id":"T968","span":{"begin":37,"end":42},"obj":"Protein"},{"id":"T969","span":{"begin":79,"end":89},"obj":"Gene_expression"}],"relations":[{"id":"R727","pred":"themeOf","subj":"T964","obj":"T969"},{"id":"R728","pred":"equivalentTo","subj":"T965","obj":"T964"},{"id":"R729","pred":"equivalentTo","subj":"T966","obj":"T964"},{"id":"R730","pred":"equivalentTo","subj":"T967","obj":"T964"},{"id":"R731","pred":"equivalentTo","subj":"T968","obj":"T964"}],"text":"uration (4–6). IRF-4 (ICSAT/Pip/MUM1/LSIRF) is one member with very restricted expression pattern: P"}