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PMC:1310901 / 2923-3023 JSONTXT

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bionlp-st-ge-2016-reference-eval

Id Subject Object Predicate Lexical cue
T2665 79-89 Gene_expression denotes expression
T2670 28-31 Protein denotes Pip
T2671 32-36 Protein denotes MUM1
T2672 37-42 Protein denotes LSIRF
T2698 15-20 Protein denotes IRF-4
T2699 22-27 Protein denotes ICSAT
R2087 T2670 T2698 equivalentTo Pip,IRF-4
R2088 T2671 T2698 equivalentTo MUM1,IRF-4
R2089 T2672 T2698 equivalentTo LSIRF,IRF-4
R2118 T2698 T2665 themeOf IRF-4,expression
R2120 T2699 T2698 equivalentTo ICSAT,IRF-4

events-check-again

Id Subject Object Predicate Lexical cue
T2527 15-20 Protein denotes IRF-4
T2528 22-27 Protein denotes ICSAT
T2529 28-31 Protein denotes Pip
T2530 32-36 Protein denotes MUM1
T2531 37-42 Protein denotes LSIRF
T2532 79-89 Gene_expression denotes expression
R2032 T2527 T2532 themeOf IRF-4,expression
R2033 T2528 T2527 equivalentTo ICSAT,IRF-4
R2034 T2529 T2527 equivalentTo Pip,IRF-4
R2035 T2530 T2527 equivalentTo MUM1,IRF-4
R2036 T2531 T2527 equivalentTo LSIRF,IRF-4

sentences

Id Subject Object Predicate Lexical cue
T1061 15-98 Sentence denotes IRF-4 (ICSAT/Pip/MUM1/LSIRF) is one member with very restricted expression pattern:
T19 15-98 Sentence denotes IRF-4 (ICSAT/Pip/MUM1/LSIRF) is one member with very restricted expression pattern:

2_test

Id Subject Object Predicate Lexical cue
16396836-9620643-76538167 9-10 9620643 denotes 4
16396836-10936058-76538167 9-10 10936058 denotes 4
16396836-11244049-76538167 9-10 11244049 denotes 4

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1298 8-9 -LRB- denotes (
T1299 9-12 CD denotes 4–6
T1300 12-13 -RRB- denotes )
T1301 15-20 NN denotes IRF-4
T1302 21-22 -LRB- denotes (
T1303 22-42 NN denotes ICSAT/Pip/MUM1/LSIRF
T1304 42-43 -RRB- denotes )
T1305 44-46 VB denotes is
T1306 47-50 CD denotes one
T1307 51-57 NN denotes member
T1308 58-62 IN denotes with
T1309 63-67 RB denotes very
T1310 68-78 JJ denotes restricted
T1311 79-89 NN denotes expression
T1312 90-97 NN denotes pattern
T1313 97-98 -COLON- denotes :
R965 T1299 T1298 arg2Of 4–6,(
R966 T1300 T1298 arg3Of ),(
R967 T1301 T1302 arg1Of IRF-4,(
R968 T1301 T1305 arg1Of IRF-4,is
R969 T1303 T1302 arg2Of ICSAT/Pip/MUM1/LSIRF,(
R970 T1304 T1302 arg3Of ),(
R971 T1307 T1305 arg2Of member,is
R972 T1307 T1306 arg1Of member,one
R973 T1307 T1308 arg1Of member,with
R974 T1307 T1313 arg1Of member,:
R975 T1310 T1309 arg1Of restricted,very
R976 T1312 T1308 arg2Of pattern,with
R977 T1312 T1310 arg1Of pattern,restricted
R978 T1312 T1311 arg1Of pattern,expression

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T1926 8-9 -LRB- denotes (
T1927 9-10 CD denotes 4
T1928 11-12 CD denotes 6
T1929 12-13 -RRB- denotes )
T1930 13-14 . denotes .
T1931 15-20 NN denotes IRF-4
T1932 21-22 -LRB- denotes (
T1933 22-36 JJ denotes ICSAT/Pip/MUM1
T1934 36-37 NN denotes /
T1935 37-42 NNP denotes LSIRF
T1936 42-43 -RRB- denotes )
T1937 44-46 VBZ denotes is
T1938 47-50 CD denotes one
T1939 51-57 NN denotes member
T1940 58-62 IN denotes with
T1941 63-67 RB denotes very
T1942 68-78 VBN denotes restricted
T1943 79-89 NN denotes expression
T1944 90-97 NN denotes pattern
T1945 97-98 : denotes :
R1589 T1931 T1937 nsubj IRF-4,is
R1593 T1932 T1935 punct (,LSIRF
R1596 T1933 T1934 amod ICSAT/Pip/MUM1,/
R1601 T1934 T1935 compound /,LSIRF
R1608 T1935 T1931 appos LSIRF,IRF-4
R1612 T1936 T1935 punct ),LSIRF
R1616 T1937 T1937 ROOT is,is
R1619 T1938 T1939 nummod one,member
R1623 T1939 T1937 attr member,is
R1626 T1940 T1939 prep with,member
R1627 T1941 T1942 advmod very,restricted
R1629 T1942 T1944 amod restricted,pattern
R1630 T1943 T1944 compound expression,pattern
R1632 T1944 T1940 pobj pattern,with
R1633 T1945 T1937 punct :,is

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T2590 15-20 Protein denotes IRF-4
T2591 22-27 Protein denotes ICSAT
T2592 28-31 Protein denotes Pip
T2593 32-36 Protein denotes MUM1
T2594 37-42 Protein denotes LSIRF
T2596 79-89 Gene_expression denotes expression
T2597 79-89 Gene_expression denotes expression
T2598 79-89 Gene_expression denotes expression
T2599 79-89 Gene_expression denotes expression
T2600 79-89 Gene_expression denotes expression
R2050 T2590 T2596 themeOf IRF-4,expression
R2051 T2591 T2597 themeOf ICSAT,expression
R2054 T2592 T2598 themeOf Pip,expression
R2057 T2593 T2599 themeOf MUM1,expression
R2058 T2594 T2600 themeOf LSIRF,expression

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T1016 15-20 Protein denotes IRF-4
T1017 22-27 Protein denotes ICSAT
T1018 28-31 Protein denotes Pip
T1019 32-36 Protein denotes MUM1
T1020 37-42 Protein denotes LSIRF
T1021 79-89 Gene_expression denotes expression
R754 T1016 T1021 themeOf IRF-4,expression
R755 T1017 T1016 equivalentTo ICSAT,IRF-4
R756 T1018 T1016 equivalentTo Pip,IRF-4
R757 T1019 T1016 equivalentTo MUM1,IRF-4
R758 T1020 T1016 equivalentTo LSIRF,IRF-4

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1689 15-20 Q15306 denotes IRF-4
T1690 22-27 Q99419 denotes ICSAT
T1691 28-31 P12273 denotes Pip
T1692 32-36 Q15306 denotes MUM1
T1693 32-36 Q2TAK8 denotes MUM1
T1694 37-42 Q15306 denotes LSIRF

test2

Id Subject Object Predicate Lexical cue
T964 15-20 Protein denotes IRF-4
T965 22-27 Protein denotes ICSAT
T966 28-31 Protein denotes Pip
T967 32-36 Protein denotes MUM1
T968 37-42 Protein denotes LSIRF
T969 79-89 Gene_expression denotes expression
R727 T964 T969 themeOf IRF-4,expression
R728 T965 T964 equivalentTo ICSAT,IRF-4
R729 T966 T964 equivalentTo Pip,IRF-4
R730 T967 T964 equivalentTo MUM1,IRF-4
R731 T968 T964 equivalentTo LSIRF,IRF-4