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PMC:1310901 / 27447-27680 JSONTXT

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bionlp-st-ge-2016-reference-eval

Id Subject Object Predicate Lexical cue
T14497 28-38 Gene_expression denotes expression
T14560 22-27 Protein denotes IRF-4
R11975 T14560 T14497 themeOf IRF-4,expression

events-check-again

Id Subject Object Predicate Lexical cue
T14293 22-27 Protein denotes IRF-4
T14294 28-38 Gene_expression denotes expression
R11843 T14293 T14294 themeOf IRF-4,expression

GO-CC

Id Subject Object Predicate Lexical cue
T13751 122-126 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T13752 205-209 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T11311 0-233 Sentence denotes In addition, abundant IRF-4 expression was found to be a marker for various subsets of lymphomas, such as diffuse large B-cell lymphomas, primary effusion lymphoma, and marginal zone lymphoma, and adult T-cell leukemia (11,31,50–52).
T187 0-233 Sentence denotes In addition, abundant IRF-4 expression was found to be a marker for various subsets of lymphomas, such as diffuse large B-cell lymphomas, primary effusion lymphoma, and marginal zone lymphoma, and adult T-cell leukemia (11,31,50–52).

2_test

Id Subject Object Predicate Lexical cue
16396836-11846982-76538218 220-222 11846982 denotes 11
16396836-12218129-76538219 223-225 12218129 denotes 31
16396836-10676951-76538220 226-228 10676951 denotes 50
16396836-10720141-76538220 226-228 10720141 denotes 50
16396836-11157493-76538220 226-228 11157493 denotes 50

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T12314 0-2 IN denotes In
T12315 3-11 NN denotes addition
T12316 11-12 -COMMA- denotes ,
T12317 13-21 JJ denotes abundant
T12318 22-27 NN denotes IRF-4
T12319 28-38 NN denotes expression
T12320 39-42 VB denotes was
T12321 43-48 VB denotes found
T12322 49-51 TO denotes to
T12323 52-54 VB denotes be
T12324 55-56 DT denotes a
T12325 57-63 NN denotes marker
T12326 64-67 IN denotes for
T12327 68-75 JJ denotes various
T12328 76-83 NN denotes subsets
T12329 84-86 IN denotes of
T12330 87-96 NN denotes lymphomas
T12331 96-97 -COMMA- denotes ,
T12332 98-102 JJ denotes such
T12333 103-105 IN denotes as
T12334 106-113 JJ denotes diffuse
T12335 114-119 JJ denotes large
T12336 120-126 NN denotes B-cell
T12337 127-136 NN denotes lymphomas
T12338 136-137 -COMMA- denotes ,
T12339 138-145 JJ denotes primary
T12340 146-154 NN denotes effusion
T12341 155-163 NN denotes lymphoma
T12342 163-164 -COMMA- denotes ,
T12343 165-168 CC denotes and
T12344 169-177 JJ denotes marginal
T12345 178-182 NN denotes zone
T12346 183-191 NN denotes lymphoma
T12347 191-192 -COMMA- denotes ,
T12348 193-196 CC denotes and
T12349 197-202 JJ denotes adult
T12350 203-209 NN denotes T-cell
T12351 210-218 NN denotes leukemia
T12352 219-220 -LRB- denotes (
T12353 220-231 CD denotes 11,31,50–52
T12354 231-232 -RRB- denotes )
R10221 T12315 T12314 arg2Of addition,In
R10222 T12319 T12317 arg1Of expression,abundant
R10223 T12319 T12318 arg1Of expression,IRF-4
R10224 T12319 T12320 arg1Of expression,was
R10225 T12319 T12321 arg2Of expression,found
R10226 T12319 T12323 arg1Of expression,be
R10227 T12321 T12314 arg1Of found,In
R10228 T12321 T12316 arg1Of found,","
R10229 T12321 T12320 arg2Of found,was
R10230 T12323 T12321 arg3Of be,found
R10231 T12323 T12322 arg1Of be,to
R10232 T12325 T12323 arg2Of marker,be
R10233 T12325 T12324 arg1Of marker,a
R10234 T12325 T12326 arg1Of marker,for
R10235 T12328 T12326 arg2Of subsets,for
R10236 T12328 T12327 arg1Of subsets,various
R10237 T12328 T12329 arg1Of subsets,of
R10238 T12328 T12331 arg1Of subsets,","
R10239 T12328 T12333 arg1Of subsets,as
R10240 T12330 T12329 arg2Of lymphomas,of
R10241 T12333 T12332 arg1Of as,such
R10242 T12337 T12334 arg1Of lymphomas,diffuse
R10243 T12337 T12335 arg1Of lymphomas,large
R10244 T12337 T12336 arg1Of lymphomas,B-cell
R10245 T12337 T12338 arg1Of lymphomas,","
R10246 T12338 T12343 arg1Of ",",and
R10247 T12341 T12338 arg2Of lymphoma,","
R10248 T12341 T12339 arg1Of lymphoma,primary
R10249 T12341 T12340 arg1Of lymphoma,effusion
R10250 T12343 T12342 arg1Of and,","
R10251 T12343 T12348 arg1Of and,and
R10252 T12346 T12343 arg2Of lymphoma,and
R10253 T12346 T12344 arg1Of lymphoma,marginal
R10254 T12346 T12345 arg1Of lymphoma,zone
R10255 T12348 T12333 arg2Of and,as
R10256 T12348 T12347 arg1Of and,","
R10257 T12351 T12348 arg2Of leukemia,and
R10258 T12351 T12349 arg1Of leukemia,adult
R10259 T12351 T12350 arg1Of leukemia,T-cell
R10260 T12351 T12352 arg1Of leukemia,(
R10261 T12353 T12352 arg2Of "11,31,50–52",(
R10262 T12354 T12352 arg3Of ),(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T13547 0-2 IN denotes In
T13548 3-11 NN denotes addition
T13549 11-12 , denotes ,
T13550 13-21 JJ denotes abundant
T13551 22-27 NN denotes IRF-4
T13552 28-38 NN denotes expression
T13553 39-42 VBD denotes was
T13554 43-48 VBN denotes found
T13555 49-51 TO denotes to
T13556 52-54 VB denotes be
T13557 55-56 DT denotes a
T13558 57-63 NN denotes marker
T13559 64-67 IN denotes for
T13560 68-75 JJ denotes various
T13561 76-83 NNS denotes subsets
T13562 84-86 IN denotes of
T13563 87-96 NNS denotes lymphomas
T13564 96-97 , denotes ,
T13565 98-102 JJ denotes such
T13566 103-105 IN denotes as
T13567 106-113 NN denotes diffuse
T13568 114-119 JJ denotes large
T13569 120-126 NNP denotes B-cell
T13570 127-136 NNS denotes lymphomas
T13571 136-137 , denotes ,
T13572 138-145 JJ denotes primary
T13573 146-154 NN denotes effusion
T13574 155-163 NN denotes lymphoma
T13575 163-164 , denotes ,
T13576 165-168 CC denotes and
T13577 169-177 JJ denotes marginal
T13578 178-182 NN denotes zone
T13579 183-191 NN denotes lymphoma
T13580 191-192 , denotes ,
T13581 193-196 CC denotes and
T13582 197-202 NN denotes adult
T13583 203-209 NN denotes T-cell
T13584 210-218 NN denotes leukemia
T13585 219-220 -LRB- denotes (
T13586 220-228 CD denotes 11,31,50
T13587 229-231 CD denotes 52
T13588 231-232 -RRB- denotes )
T13589 232-233 . denotes .
R11341 T13547 T13554 prep In,found
R11342 T13548 T13547 pobj addition,In
R11343 T13549 T13554 punct ",",found
R11345 T13550 T13552 amod abundant,expression
R11348 T13551 T13552 compound IRF-4,expression
R11351 T13552 T13554 nsubjpass expression,found
R11353 T13553 T13554 auxpass was,found
R11355 T13554 T13554 ROOT found,found
R11356 T13555 T13556 aux to,be
R11357 T13556 T13554 xcomp be,found
R11358 T13557 T13558 det a,marker
R11360 T13558 T13556 attr marker,be
R11361 T13559 T13558 prep for,marker
R11363 T13560 T13561 amod various,subsets
R11364 T13561 T13559 pobj subsets,for
R11366 T13562 T13561 prep of,subsets
R11367 T13563 T13562 pobj lymphomas,of
R11368 T13564 T13563 punct ",",lymphomas
R11369 T13565 T13566 amod such,as
R11370 T13566 T13563 prep as,lymphomas
R11371 T13567 T13566 pobj diffuse,as
R11373 T13568 T13570 amod large,lymphomas
R11374 T13569 T13570 compound B-cell,lymphomas
R11375 T13570 T13567 dobj lymphomas,diffuse
R11377 T13571 T13570 punct ",",lymphomas
R11378 T13572 T13574 amod primary,lymphoma
R11379 T13573 T13574 compound effusion,lymphoma
R11381 T13574 T13570 conj lymphoma,lymphomas
R11382 T13575 T13574 punct ",",lymphoma
R11383 T13576 T13574 cc and,lymphoma
R11384 T13577 T13578 amod marginal,zone
R11386 T13578 T13574 conj zone,lymphoma
R11387 T13579 T13574 conj lymphoma,lymphoma
R11388 T13580 T13579 punct ",",lymphoma
R11390 T13581 T13579 cc and,lymphoma
R11391 T13582 T13584 compound adult,leukemia
R11393 T13583 T13584 compound T-cell,leukemia
R11394 T13584 T13579 conj leukemia,lymphoma
R11395 T13585 T13586 punct (,"11,31,50"
R11396 T13586 T13584 appos "11,31,50",leukemia
R11400 T13587 T13584 appos 52,leukemia
R11402 T13588 T13584 punct ),leukemia
R11403 T13589 T13554 punct .,found

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T14423 22-27 Protein denotes IRF-4
T14424 28-38 Gene_expression denotes expression
R11919 T14423 T14424 themeOf IRF-4,expression

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T11259 22-27 Protein denotes IRF-4
T11260 28-38 Gene_expression denotes expression
R9215 T11259 T11260 themeOf IRF-4,expression

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T12521 22-27 Q15306 denotes IRF-4

test2

Id Subject Object Predicate Lexical cue
T11119 22-27 Protein denotes IRF-4
T11120 28-38 Gene_expression denotes expression
R9130 T11119 T11120 themeOf IRF-4,expression