PMC:1310901 / 21337-21492 JSONTXT

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    bionlp-st-ge-2016-reference-eval

    {"project":"bionlp-st-ge-2016-reference-eval","denotations":[{"id":"T10830","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10831","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10832","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10833","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10834","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10835","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10836","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10837","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10838","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10839","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10840","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10841","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10842","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10843","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10856","span":{"begin":142,"end":147},"obj":"Protein"}],"text":"In fact, all analyzed cells had moderate to high mRNA levels of these tested DNMT/MBPs and differences in expression were not correlated with IRF-4 status."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T10754","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10755","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10756","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10757","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10758","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10759","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10760","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10761","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10762","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10763","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10764","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10765","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10766","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10767","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10768","span":{"begin":142,"end":147},"obj":"Protein"}],"text":"In fact, all analyzed cells had moderate to high mRNA levels of these tested DNMT/MBPs and differences in expression were not correlated with IRF-4 status."}

    GO-CC

    {"project":"GO-CC","denotations":[{"id":"T10593","span":{"begin":22,"end":27},"obj":"http://purl.obolibrary.org/obo/GO_0005623"}],"text":"In fact, all analyzed cells had moderate to high mRNA levels of these tested DNMT/MBPs and differences in expression were not correlated with IRF-4 status."}

    sentences

    {"project":"sentences","denotations":[{"id":"T10247","span":{"begin":0,"end":155},"obj":"Sentence"},{"id":"T151","span":{"begin":0,"end":155},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"In fact, all analyzed cells had moderate to high mRNA levels of these tested DNMT/MBPs and differences in expression were not correlated with IRF-4 status."}

    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T10349","span":{"begin":0,"end":2},"obj":"IN"},{"id":"T10350","span":{"begin":3,"end":7},"obj":"NN"},{"id":"T10351","span":{"begin":7,"end":8},"obj":"-COMMA-"},{"id":"T10352","span":{"begin":9,"end":12},"obj":"DT"},{"id":"T10353","span":{"begin":13,"end":21},"obj":"VB"},{"id":"T10354","span":{"begin":22,"end":27},"obj":"NN"},{"id":"T10355","span":{"begin":28,"end":31},"obj":"VB"},{"id":"T10356","span":{"begin":32,"end":40},"obj":"JJ"},{"id":"T10357","span":{"begin":41,"end":43},"obj":"TO"},{"id":"T10358","span":{"begin":44,"end":48},"obj":"JJ"},{"id":"T10359","span":{"begin":49,"end":53},"obj":"NN"},{"id":"T10360","span":{"begin":54,"end":60},"obj":"NN"},{"id":"T10361","span":{"begin":61,"end":63},"obj":"IN"},{"id":"T10362","span":{"begin":64,"end":69},"obj":"DT"},{"id":"T10363","span":{"begin":70,"end":76},"obj":"VB"},{"id":"T10364","span":{"begin":77,"end":86},"obj":"NN"},{"id":"T10365","span":{"begin":87,"end":90},"obj":"CC"},{"id":"T10366","span":{"begin":91,"end":102},"obj":"NN"},{"id":"T10367","span":{"begin":103,"end":105},"obj":"IN"},{"id":"T10368","span":{"begin":106,"end":116},"obj":"NN"},{"id":"T10369","span":{"begin":117,"end":121},"obj":"VB"},{"id":"T10370","span":{"begin":122,"end":125},"obj":"RB"},{"id":"T10371","span":{"begin":126,"end":136},"obj":"VB"},{"id":"T10372","span":{"begin":137,"end":141},"obj":"IN"},{"id":"T10373","span":{"begin":142,"end":147},"obj":"NN"},{"id":"T10374","span":{"begin":148,"end":154},"obj":"NN"}],"relations":[{"id":"R8575","pred":"arg2Of","subj":"T10350","obj":"T10349"},{"id":"R8576","pred":"arg1Of","subj":"T10354","obj":"T10352"},{"id":"R8577","pred":"arg2Of","subj":"T10354","obj":"T10353"},{"id":"R8578","pred":"arg1Of","subj":"T10354","obj":"T10355"},{"id":"R8579","pred":"arg1Of","subj":"T10355","obj":"T10349"},{"id":"R8580","pred":"arg1Of","subj":"T10355","obj":"T10351"},{"id":"R8581","pred":"arg1Of","subj":"T10355","obj":"T10365"},{"id":"R8582","pred":"arg1Of","subj":"T10358","obj":"T10356"},{"id":"R8583","pred":"arg1Of","subj":"T10358","obj":"T10357"},{"id":"R8584","pred":"arg2Of","subj":"T10360","obj":"T10355"},{"id":"R8585","pred":"arg1Of","subj":"T10360","obj":"T10358"},{"id":"R8586","pred":"arg1Of","subj":"T10360","obj":"T10359"},{"id":"R8587","pred":"arg1Of","subj":"T10360","obj":"T10361"},{"id":"R8588","pred":"arg2Of","subj":"T10364","obj":"T10361"},{"id":"R8589","pred":"arg1Of","subj":"T10364","obj":"T10362"},{"id":"R8590","pred":"arg2Of","subj":"T10364","obj":"T10363"},{"id":"R8591","pred":"arg1Of","subj":"T10366","obj":"T10367"},{"id":"R8592","pred":"arg1Of","subj":"T10366","obj":"T10369"},{"id":"R8593","pred":"arg2Of","subj":"T10366","obj":"T10371"},{"id":"R8594","pred":"arg2Of","subj":"T10368","obj":"T10367"},{"id":"R8595","pred":"arg2Of","subj":"T10371","obj":"T10365"},{"id":"R8596","pred":"arg2Of","subj":"T10371","obj":"T10369"},{"id":"R8597","pred":"arg1Of","subj":"T10371","obj":"T10370"},{"id":"R8598","pred":"arg1Of","subj":"T10371","obj":"T10372"},{"id":"R8599","pred":"arg2Of","subj":"T10374","obj":"T10372"},{"id":"R8600","pred":"arg1Of","subj":"T10374","obj":"T10373"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"In fact, all analyzed cells had moderate to high mRNA levels of these tested DNMT/MBPs and differences in expression were not correlated with IRF-4 status."}

    bionlp-st-ge-2016-coref

    {"project":"bionlp-st-ge-2016-coref","denotations":[{"id":"T10400","span":{"begin":64,"end":81},"obj":"Anaphor"},{"id":"T10404","span":{"begin":82,"end":86},"obj":"Anaphor"}],"namespaces":[{"prefix":"_base","uri":"https://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"In fact, all analyzed cells had moderate to high mRNA levels of these tested DNMT/MBPs and differences in expression were not correlated with IRF-4 status."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T10530","span":{"begin":0,"end":2},"obj":"IN"},{"id":"T10531","span":{"begin":3,"end":7},"obj":"NN"},{"id":"T10532","span":{"begin":7,"end":8},"obj":","},{"id":"T10533","span":{"begin":9,"end":12},"obj":"DT"},{"id":"T10534","span":{"begin":13,"end":21},"obj":"VBD"},{"id":"T10535","span":{"begin":22,"end":27},"obj":"NNS"},{"id":"T10536","span":{"begin":28,"end":31},"obj":"VBD"},{"id":"T10537","span":{"begin":32,"end":40},"obj":"JJ"},{"id":"T10538","span":{"begin":41,"end":43},"obj":"TO"},{"id":"T10539","span":{"begin":44,"end":48},"obj":"JJ"},{"id":"T10540","span":{"begin":49,"end":53},"obj":"NN"},{"id":"T10541","span":{"begin":54,"end":60},"obj":"NNS"},{"id":"T10542","span":{"begin":61,"end":63},"obj":"IN"},{"id":"T10543","span":{"begin":64,"end":69},"obj":"DT"},{"id":"T10544","span":{"begin":70,"end":76},"obj":"VBN"},{"id":"T10545","span":{"begin":77,"end":86},"obj":"NNP"},{"id":"T10546","span":{"begin":87,"end":90},"obj":"CC"},{"id":"T10547","span":{"begin":91,"end":102},"obj":"NNS"},{"id":"T10548","span":{"begin":103,"end":105},"obj":"IN"},{"id":"T10549","span":{"begin":106,"end":116},"obj":"NN"},{"id":"T10550","span":{"begin":117,"end":121},"obj":"VBD"},{"id":"T10551","span":{"begin":122,"end":125},"obj":"RB"},{"id":"T10552","span":{"begin":126,"end":136},"obj":"VBN"},{"id":"T10553","span":{"begin":137,"end":141},"obj":"IN"},{"id":"T10554","span":{"begin":142,"end":147},"obj":"JJ"},{"id":"T10555","span":{"begin":148,"end":154},"obj":"NN"},{"id":"T10556","span":{"begin":154,"end":155},"obj":"."}],"relations":[{"id":"R8737","pred":"prep","subj":"T10530","obj":"T10534"},{"id":"R8738","pred":"pobj","subj":"T10531","obj":"T10530"},{"id":"R8739","pred":"punct","subj":"T10532","obj":"T10534"},{"id":"R8740","pred":"nsubj","subj":"T10533","obj":"T10534"},{"id":"R8741","pred":"ROOT","subj":"T10534","obj":"T10534"},{"id":"R8742","pred":"nsubj","subj":"T10535","obj":"T10536"},{"id":"R8743","pred":"ccomp","subj":"T10536","obj":"T10534"},{"id":"R8744","pred":"dobj","subj":"T10537","obj":"T10536"},{"id":"R8745","pred":"prep","subj":"T10538","obj":"T10552"},{"id":"R8746","pred":"amod","subj":"T10539","obj":"T10541"},{"id":"R8747","pred":"compound","subj":"T10540","obj":"T10541"},{"id":"R8748","pred":"pobj","subj":"T10541","obj":"T10538"},{"id":"R8749","pred":"prep","subj":"T10542","obj":"T10541"},{"id":"R8750","pred":"det","subj":"T10543","obj":"T10545"},{"id":"R8751","pred":"amod","subj":"T10544","obj":"T10545"},{"id":"R8752","pred":"pobj","subj":"T10545","obj":"T10542"},{"id":"R8753","pred":"cc","subj":"T10546","obj":"T10545"},{"id":"R8754","pred":"conj","subj":"T10547","obj":"T10541"},{"id":"R8755","pred":"prep","subj":"T10548","obj":"T10547"},{"id":"R8756","pred":"pobj","subj":"T10549","obj":"T10548"},{"id":"R8757","pred":"auxpass","subj":"T10550","obj":"T10552"},{"id":"R8758","pred":"neg","subj":"T10551","obj":"T10552"},{"id":"R8759","pred":"conj","subj":"T10552","obj":"T10534"},{"id":"R8760","pred":"prep","subj":"T10553","obj":"T10552"},{"id":"R8761","pred":"amod","subj":"T10554","obj":"T10555"},{"id":"R8762","pred":"pobj","subj":"T10555","obj":"T10553"},{"id":"R8763","pred":"punct","subj":"T10556","obj":"T10534"}],"text":"In fact, all analyzed cells had moderate to high mRNA levels of these tested DNMT/MBPs and differences in expression were not correlated with IRF-4 status."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T10819","span":{"begin":77,"end":81},"obj":"Protein"},{"id":"T10820","span":{"begin":82,"end":86},"obj":"Protein"},{"id":"T10821","span":{"begin":142,"end":147},"obj":"Protein"},{"id":"T10822","span":{"begin":54,"end":60},"obj":"Transcription"},{"id":"T10823","span":{"begin":54,"end":60},"obj":"Transcription"}],"relations":[{"id":"R8952","pred":"themeOf","subj":"T10819","obj":"T10822"},{"id":"R8953","pred":"themeOf","subj":"T10820","obj":"T10823"}],"text":"In fact, all analyzed cells had moderate to high mRNA levels of these tested DNMT/MBPs and differences in expression were not correlated with IRF-4 status."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T10219","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10220","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10221","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10222","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10223","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10224","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10225","span":{"begin":49,"end":60},"obj":"Transcription"},{"id":"T10226","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10227","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10228","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10229","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10230","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10231","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10232","span":{"begin":106,"end":116},"obj":"Transcription"},{"id":"T10233","span":{"begin":142,"end":147},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"In fact, all analyzed cells had moderate to high mRNA levels of these tested DNMT/MBPs and differences in expression were not correlated with IRF-4 status."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T10430","span":{"begin":77,"end":81},"obj":"P26358"},{"id":"T10431","span":{"begin":142,"end":147},"obj":"Q15306"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"In fact, all analyzed cells had moderate to high mRNA levels of these tested DNMT/MBPs and differences in expression were not correlated with IRF-4 status."}