PMC:1310901 / 15785-15970 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/1310901","sourcedb":"PMC","sourceid":"1310901","source_url":"http://www.ncbi.nlm.nih.gov/pmc/1310901","text":"This implied that promoter methylation may control IRF-4 expression, but an alternative explanation may be activation of positive transcriptional regulators of IRF-4 by AzadC (or AzaC).","tracks":[{"project":"bionlp-st-ge-2016-reference-eval","denotations":[{"id":"T7769","span":{"begin":43,"end":50},"obj":"Regulation"},{"id":"T7770","span":{"begin":57,"end":67},"obj":"Gene_expression"},{"id":"T7779","span":{"begin":51,"end":56},"obj":"Protein"},{"id":"T7780","span":{"begin":160,"end":165},"obj":"Protein"}],"relations":[{"id":"R6467","pred":"themeOf","subj":"T7770","obj":"T7769"},{"id":"R6472","pred":"themeOf","subj":"T7779","obj":"T7770"}],"attributes":[{"subj":"T7769","pred":"source","obj":"bionlp-st-ge-2016-reference-eval"},{"subj":"T7770","pred":"source","obj":"bionlp-st-ge-2016-reference-eval"},{"subj":"T7779","pred":"source","obj":"bionlp-st-ge-2016-reference-eval"},{"subj":"T7780","pred":"source","obj":"bionlp-st-ge-2016-reference-eval"}]},{"project":"events-check-again","denotations":[{"id":"T7728","span":{"begin":43,"end":50},"obj":"Regulation"},{"id":"T7729","span":{"begin":51,"end":56},"obj":"Protein"},{"id":"T7730","span":{"begin":57,"end":67},"obj":"Gene_expression"},{"id":"T7731","span":{"begin":160,"end":165},"obj":"Protein"}],"relations":[{"id":"R6446","pred":"themeOf","subj":"T7729","obj":"T7730"},{"id":"R6447","pred":"themeOf","subj":"T7730","obj":"T7728"}],"attributes":[{"id":"M161","pred":"Speculation","subj":"T7728","obj":"true"},{"subj":"T7728","pred":"source","obj":"events-check-again"},{"subj":"T7729","pred":"source","obj":"events-check-again"},{"subj":"T7730","pred":"source","obj":"events-check-again"},{"subj":"T7731","pred":"source","obj":"events-check-again"}]},{"project":"sentences","denotations":[{"id":"T7015","span":{"begin":0,"end":185},"obj":"Sentence"},{"id":"T119","span":{"begin":0,"end":185},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T7015","pred":"source","obj":"sentences"},{"subj":"T119","pred":"source","obj":"sentences"}]},{"project":"pmc-enju-pas","denotations":[{"id":"T7274","span":{"begin":0,"end":4},"obj":"DT"},{"id":"T7275","span":{"begin":5,"end":12},"obj":"VB"},{"id":"T7276","span":{"begin":13,"end":17},"obj":"IN"},{"id":"T7277","span":{"begin":18,"end":26},"obj":"NN"},{"id":"T7278","span":{"begin":27,"end":38},"obj":"NN"},{"id":"T7279","span":{"begin":39,"end":42},"obj":"MD"},{"id":"T7280","span":{"begin":43,"end":50},"obj":"VB"},{"id":"T7281","span":{"begin":51,"end":56},"obj":"NN"},{"id":"T7282","span":{"begin":57,"end":67},"obj":"NN"},{"id":"T7283","span":{"begin":67,"end":68},"obj":"-COMMA-"},{"id":"T7284","span":{"begin":69,"end":72},"obj":"CC"},{"id":"T7285","span":{"begin":73,"end":75},"obj":"DT"},{"id":"T7286","span":{"begin":76,"end":87},"obj":"JJ"},{"id":"T7287","span":{"begin":88,"end":99},"obj":"NN"},{"id":"T7288","span":{"begin":100,"end":103},"obj":"MD"},{"id":"T7289","span":{"begin":104,"end":106},"obj":"VB"},{"id":"T7290","span":{"begin":107,"end":117},"obj":"NN"},{"id":"T7291","span":{"begin":118,"end":120},"obj":"IN"},{"id":"T7292","span":{"begin":121,"end":129},"obj":"JJ"},{"id":"T7293","span":{"begin":130,"end":145},"obj":"JJ"},{"id":"T7294","span":{"begin":146,"end":156},"obj":"NN"},{"id":"T7295","span":{"begin":157,"end":159},"obj":"IN"},{"id":"T7296","span":{"begin":160,"end":165},"obj":"NN"},{"id":"T7297","span":{"begin":166,"end":168},"obj":"IN"},{"id":"T7298","span":{"begin":169,"end":174},"obj":"NN"},{"id":"T7299","span":{"begin":175,"end":176},"obj":"-LRB-"},{"id":"T7300","span":{"begin":176,"end":178},"obj":"CC"},{"id":"T7301","span":{"begin":179,"end":183},"obj":"NN"},{"id":"T7302","span":{"begin":183,"end":184},"obj":"-RRB-"}],"relations":[{"id":"R6065","pred":"arg1Of","subj":"T7274","obj":"T7275"},{"id":"R6066","pred":"arg1Of","subj":"T7278","obj":"T7277"},{"id":"R6067","pred":"arg1Of","subj":"T7278","obj":"T7279"},{"id":"R6068","pred":"arg1Of","subj":"T7278","obj":"T7280"},{"id":"R6069","pred":"arg2Of","subj":"T7280","obj":"T7279"},{"id":"R6070","pred":"arg1Of","subj":"T7280","obj":"T7284"},{"id":"R6071","pred":"arg2Of","subj":"T7282","obj":"T7280"},{"id":"R6072","pred":"arg1Of","subj":"T7282","obj":"T7281"},{"id":"R6073","pred":"arg2Of","subj":"T7284","obj":"T7275"},{"id":"R6074","pred":"arg1Of","subj":"T7284","obj":"T7276"},{"id":"R6075","pred":"arg1Of","subj":"T7284","obj":"T7283"},{"id":"R6076","pred":"arg1Of","subj":"T7287","obj":"T7285"},{"id":"R6077","pred":"arg1Of","subj":"T7287","obj":"T7286"},{"id":"R6078","pred":"arg1Of","subj":"T7287","obj":"T7288"},{"id":"R6079","pred":"arg1Of","subj":"T7287","obj":"T7289"},{"id":"R6080","pred":"arg2Of","subj":"T7289","obj":"T7284"},{"id":"R6081","pred":"arg2Of","subj":"T7289","obj":"T7288"},{"id":"R6082","pred":"arg1Of","subj":"T7289","obj":"T7297"},{"id":"R6083","pred":"arg2Of","subj":"T7290","obj":"T7289"},{"id":"R6084","pred":"arg1Of","subj":"T7290","obj":"T7291"},{"id":"R6085","pred":"arg2Of","subj":"T7294","obj":"T7291"},{"id":"R6086","pred":"arg1Of","subj":"T7294","obj":"T7292"},{"id":"R6087","pred":"arg1Of","subj":"T7294","obj":"T7293"},{"id":"R6088","pred":"arg1Of","subj":"T7294","obj":"T7295"},{"id":"R6089","pred":"arg2Of","subj":"T7296","obj":"T7295"},{"id":"R6090","pred":"arg2Of","subj":"T7298","obj":"T7297"},{"id":"R6091","pred":"arg1Of","subj":"T7298","obj":"T7299"},{"id":"R6092","pred":"arg2Of","subj":"T7301","obj":"T7299"},{"id":"R6093","pred":"arg1Of","subj":"T7301","obj":"T7300"},{"id":"R6094","pred":"arg3Of","subj":"T7302","obj":"T7299"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T7274","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7275","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7276","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7277","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7278","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7279","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7280","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7281","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7282","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7283","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7284","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7285","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7286","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7287","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7288","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7289","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7290","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7291","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7292","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7293","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7294","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7295","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7296","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7297","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7298","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7299","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7300","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7301","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7302","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T7574","span":{"begin":0,"end":4},"obj":"DT"},{"id":"T7575","span":{"begin":5,"end":12},"obj":"VBD"},{"id":"T7576","span":{"begin":13,"end":17},"obj":"IN"},{"id":"T7577","span":{"begin":18,"end":26},"obj":"NN"},{"id":"T7578","span":{"begin":27,"end":38},"obj":"NN"},{"id":"T7579","span":{"begin":39,"end":42},"obj":"MD"},{"id":"T7580","span":{"begin":43,"end":50},"obj":"VB"},{"id":"T7581","span":{"begin":51,"end":56},"obj":"JJ"},{"id":"T7582","span":{"begin":57,"end":67},"obj":"NN"},{"id":"T7583","span":{"begin":67,"end":68},"obj":","},{"id":"T7584","span":{"begin":69,"end":72},"obj":"CC"},{"id":"T7585","span":{"begin":73,"end":75},"obj":"DT"},{"id":"T7586","span":{"begin":76,"end":87},"obj":"JJ"},{"id":"T7587","span":{"begin":88,"end":99},"obj":"NN"},{"id":"T7588","span":{"begin":100,"end":103},"obj":"MD"},{"id":"T7589","span":{"begin":104,"end":106},"obj":"VB"},{"id":"T7590","span":{"begin":107,"end":117},"obj":"NN"},{"id":"T7591","span":{"begin":118,"end":120},"obj":"IN"},{"id":"T7592","span":{"begin":121,"end":129},"obj":"JJ"},{"id":"T7593","span":{"begin":130,"end":145},"obj":"JJ"},{"id":"T7594","span":{"begin":146,"end":156},"obj":"NNS"},{"id":"T7595","span":{"begin":157,"end":159},"obj":"IN"},{"id":"T7596","span":{"begin":160,"end":165},"obj":"NN"},{"id":"T7597","span":{"begin":166,"end":168},"obj":"IN"},{"id":"T7598","span":{"begin":169,"end":174},"obj":"NNP"},{"id":"T7599","span":{"begin":175,"end":176},"obj":"-LRB-"},{"id":"T7600","span":{"begin":176,"end":178},"obj":"CC"},{"id":"T7601","span":{"begin":179,"end":183},"obj":"NNP"},{"id":"T7602","span":{"begin":183,"end":184},"obj":"-RRB-"},{"id":"T7603","span":{"begin":184,"end":185},"obj":"."}],"relations":[{"id":"R6354","pred":"nsubj","subj":"T7574","obj":"T7575"},{"id":"R6355","pred":"ROOT","subj":"T7575","obj":"T7575"},{"id":"R6356","pred":"mark","subj":"T7576","obj":"T7580"},{"id":"R6357","pred":"compound","subj":"T7577","obj":"T7578"},{"id":"R6358","pred":"nsubj","subj":"T7578","obj":"T7580"},{"id":"R6359","pred":"aux","subj":"T7579","obj":"T7580"},{"id":"R6360","pred":"ccomp","subj":"T7580","obj":"T7575"},{"id":"R6361","pred":"amod","subj":"T7581","obj":"T7582"},{"id":"R6362","pred":"dobj","subj":"T7582","obj":"T7580"},{"id":"R6363","pred":"punct","subj":"T7583","obj":"T7580"},{"id":"R6364","pred":"cc","subj":"T7584","obj":"T7575"},{"id":"R6365","pred":"det","subj":"T7585","obj":"T7587"},{"id":"R6366","pred":"amod","subj":"T7586","obj":"T7587"},{"id":"R6367","pred":"nsubj","subj":"T7587","obj":"T7589"},{"id":"R6368","pred":"aux","subj":"T7588","obj":"T7589"},{"id":"R6369","pred":"conj","subj":"T7589","obj":"T7575"},{"id":"R6370","pred":"attr","subj":"T7590","obj":"T7589"},{"id":"R6371","pred":"prep","subj":"T7591","obj":"T7590"},{"id":"R6372","pred":"amod","subj":"T7592","obj":"T7594"},{"id":"R6373","pred":"amod","subj":"T7593","obj":"T7594"},{"id":"R6374","pred":"pobj","subj":"T7594","obj":"T7591"},{"id":"R6375","pred":"prep","subj":"T7595","obj":"T7594"},{"id":"R6376","pred":"pobj","subj":"T7596","obj":"T7595"},{"id":"R6377","pred":"prep","subj":"T7597","obj":"T7589"},{"id":"R6378","pred":"pobj","subj":"T7598","obj":"T7597"},{"id":"R6379","pred":"punct","subj":"T7599","obj":"T7598"},{"id":"R6380","pred":"cc","subj":"T7600","obj":"T7598"},{"id":"R6381","pred":"conj","subj":"T7601","obj":"T7598"},{"id":"R6382","pred":"punct","subj":"T7602","obj":"T7589"},{"id":"R6383","pred":"punct","subj":"T7603","obj":"T7589"}],"attributes":[{"subj":"T7574","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7575","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7576","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7577","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7578","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7579","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7580","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7581","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7582","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7583","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7584","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7585","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7586","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7587","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7588","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7589","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7590","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7591","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7592","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7593","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7594","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7595","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7596","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7597","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7598","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7599","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7600","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7601","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7602","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7603","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"GO-BP","denotations":[{"id":"T7019","span":{"begin":27,"end":38},"obj":"http://purl.obolibrary.org/obo/GO_0032259"},{"id":"T7023","span":{"begin":130,"end":145},"obj":"http://purl.obolibrary.org/obo/GO_0006351"}],"attributes":[{"subj":"T7019","pred":"source","obj":"GO-BP"},{"subj":"T7023","pred":"source","obj":"GO-BP"}]},{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T7759","span":{"begin":51,"end":56},"obj":"Protein"},{"id":"T7760","span":{"begin":160,"end":165},"obj":"Protein"},{"id":"T7761","span":{"begin":169,"end":174},"obj":"Protein"},{"id":"T7762","span":{"begin":57,"end":67},"obj":"Gene_expression"},{"id":"T7763","span":{"begin":43,"end":50},"obj":"Regulation"}],"relations":[{"id":"R6463","pred":"themeOf","subj":"T7759","obj":"T7762"},{"id":"R6464","pred":"themeOf","subj":"T7762","obj":"T7763"}],"attributes":[{"subj":"T7759","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T7760","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T7761","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T7762","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T7763","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"}]},{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T7000","span":{"begin":43,"end":50},"obj":"Regulation"},{"id":"T7001","span":{"begin":51,"end":56},"obj":"Protein"},{"id":"T7002","span":{"begin":57,"end":67},"obj":"Gene_expression"},{"id":"T7003","span":{"begin":160,"end":165},"obj":"Protein"}],"relations":[{"id":"R5812","pred":"themeOf","subj":"T7001","obj":"T7002"},{"id":"R5813","pred":"themeOf","subj":"T7002","obj":"T7000"}],"attributes":[{"id":"M153","pred":"Speculation","subj":"T7000","obj":"true"},{"subj":"T7000","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T7001","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T7002","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T7003","pred":"source","obj":"bionlp-st-ge-2016-reference"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T7314","span":{"begin":160,"end":165},"obj":"Q15306"},{"id":"T7313","span":{"begin":51,"end":56},"obj":"Q15306"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T7314","pred":"source","obj":"bionlp-st-ge-2016-uniprot"},{"subj":"T7313","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"test2","denotations":[{"id":"T6971","span":{"begin":43,"end":50},"obj":"Regulation"},{"id":"T6972","span":{"begin":51,"end":56},"obj":"Protein"},{"id":"T6973","span":{"begin":57,"end":67},"obj":"Gene_expression"},{"id":"T6974","span":{"begin":107,"end":117},"obj":"Positive_regulation"},{"id":"T6975","span":{"begin":160,"end":165},"obj":"Protein"}],"relations":[{"id":"R5795","pred":"themeOf","subj":"T6972","obj":"T6973"},{"id":"R5796","pred":"themeOf","subj":"T6973","obj":"T6971"},{"id":"R5797","pred":"causeOf","subj":"T6975","obj":"T6974"}],"attributes":[{"subj":"T6971","pred":"source","obj":"test2"},{"subj":"T6972","pred":"source","obj":"test2"},{"subj":"T6973","pred":"source","obj":"test2"},{"subj":"T6974","pred":"source","obj":"test2"},{"subj":"T6975","pred":"source","obj":"test2"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"bionlp-st-ge-2016-reference-eval","color":"#ecb793","default":true},{"id":"events-check-again","color":"#9d93ec"},{"id":"sentences","color":"#a3ec93"},{"id":"pmc-enju-pas","color":"#ec93bd"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#93d7ec"},{"id":"GO-BP","color":"#ece793"},{"id":"bionlp-st-ge-2016-reference-tees","color":"#cd93ec"},{"id":"bionlp-st-ge-2016-reference","color":"#93ecb3"},{"id":"bionlp-st-ge-2016-uniprot","color":"#ec9993"},{"id":"test2","color":"#93a7ec"}]}]}}