PMC:1310901 / 14408-14515
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/1310901","sourcedb":"PMC","sourceid":"1310901","source_url":"http://www.ncbi.nlm.nih.gov/pmc/1310901","text":"We next analyzed whether promoter methylation could be responsible for down-regulation of IRF-4 expression.","tracks":[{"project":"bionlp-st-ge-2016-reference-eval","denotations":[{"id":"T7771","span":{"begin":96,"end":106},"obj":"Gene_expression"},{"id":"T7781","span":{"begin":90,"end":95},"obj":"Protein"}],"relations":[{"id":"R6473","pred":"themeOf","subj":"T7781","obj":"T7771"}],"attributes":[{"subj":"T7771","pred":"source","obj":"bionlp-st-ge-2016-reference-eval"},{"subj":"T7781","pred":"source","obj":"bionlp-st-ge-2016-reference-eval"}]},{"project":"events-check-again","denotations":[{"id":"T7707","span":{"begin":90,"end":95},"obj":"Protein"},{"id":"T7708","span":{"begin":96,"end":106},"obj":"Gene_expression"}],"relations":[{"id":"R6434","pred":"themeOf","subj":"T7707","obj":"T7708"}],"attributes":[{"subj":"T7707","pred":"source","obj":"events-check-again"},{"subj":"T7708","pred":"source","obj":"events-check-again"}]},{"project":"sentences","denotations":[{"id":"T7005","span":{"begin":0,"end":107},"obj":"Sentence"},{"id":"T109","span":{"begin":0,"end":107},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T7005","pred":"source","obj":"sentences"},{"subj":"T109","pred":"source","obj":"sentences"}]},{"project":"pmc-enju-pas","denotations":[{"id":"T7035","span":{"begin":0,"end":2},"obj":"PRP"},{"id":"T7036","span":{"begin":3,"end":7},"obj":"RB"},{"id":"T7037","span":{"begin":8,"end":16},"obj":"VB"},{"id":"T7038","span":{"begin":17,"end":24},"obj":"IN"},{"id":"T7039","span":{"begin":25,"end":33},"obj":"NN"},{"id":"T7040","span":{"begin":34,"end":45},"obj":"NN"},{"id":"T7041","span":{"begin":46,"end":51},"obj":"MD"},{"id":"T7042","span":{"begin":52,"end":54},"obj":"VB"},{"id":"T7043","span":{"begin":55,"end":66},"obj":"JJ"},{"id":"T7044","span":{"begin":67,"end":70},"obj":"IN"},{"id":"T7045","span":{"begin":71,"end":86},"obj":"NN"},{"id":"T7046","span":{"begin":87,"end":89},"obj":"IN"},{"id":"T7047","span":{"begin":90,"end":95},"obj":"NN"},{"id":"T7048","span":{"begin":96,"end":106},"obj":"NN"}],"relations":[{"id":"R5823","pred":"arg1Of","subj":"T7035","obj":"T7037"},{"id":"R5824","pred":"arg1Of","subj":"T7037","obj":"T7036"},{"id":"R5825","pred":"arg1Of","subj":"T7040","obj":"T7039"},{"id":"R5826","pred":"arg1Of","subj":"T7040","obj":"T7041"},{"id":"R5827","pred":"arg1Of","subj":"T7040","obj":"T7042"},{"id":"R5828","pred":"arg1Of","subj":"T7040","obj":"T7043"},{"id":"R5829","pred":"arg2Of","subj":"T7042","obj":"T7037"},{"id":"R5830","pred":"arg1Of","subj":"T7042","obj":"T7038"},{"id":"R5831","pred":"arg2Of","subj":"T7042","obj":"T7041"},{"id":"R5832","pred":"arg2Of","subj":"T7043","obj":"T7042"},{"id":"R5833","pred":"arg1Of","subj":"T7043","obj":"T7044"},{"id":"R5834","pred":"arg2Of","subj":"T7045","obj":"T7044"},{"id":"R5835","pred":"arg1Of","subj":"T7045","obj":"T7046"},{"id":"R5836","pred":"arg2Of","subj":"T7048","obj":"T7046"},{"id":"R5837","pred":"arg1Of","subj":"T7048","obj":"T7047"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"attributes":[{"subj":"T7035","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7036","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7037","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7038","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7039","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7040","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7041","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7042","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7043","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7044","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7045","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7046","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7047","pred":"source","obj":"pmc-enju-pas"},{"subj":"T7048","pred":"source","obj":"pmc-enju-pas"}]},{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T7325","span":{"begin":0,"end":2},"obj":"PRP"},{"id":"T7326","span":{"begin":3,"end":7},"obj":"JJ"},{"id":"T7327","span":{"begin":8,"end":16},"obj":"VBD"},{"id":"T7328","span":{"begin":17,"end":24},"obj":"IN"},{"id":"T7329","span":{"begin":25,"end":33},"obj":"NN"},{"id":"T7330","span":{"begin":34,"end":45},"obj":"NN"},{"id":"T7331","span":{"begin":46,"end":51},"obj":"MD"},{"id":"T7332","span":{"begin":52,"end":54},"obj":"VB"},{"id":"T7333","span":{"begin":55,"end":66},"obj":"JJ"},{"id":"T7334","span":{"begin":67,"end":70},"obj":"IN"},{"id":"T7335","span":{"begin":71,"end":86},"obj":"NN"},{"id":"T7336","span":{"begin":87,"end":89},"obj":"IN"},{"id":"T7337","span":{"begin":90,"end":95},"obj":"NN"},{"id":"T7338","span":{"begin":96,"end":106},"obj":"NN"},{"id":"T7339","span":{"begin":106,"end":107},"obj":"."}],"relations":[{"id":"R6105","pred":"nsubj","subj":"T7325","obj":"T7327"},{"id":"R6106","pred":"advmod","subj":"T7326","obj":"T7327"},{"id":"R6108","pred":"mark","subj":"T7328","obj":"T7332"},{"id":"R6109","pred":"compound","subj":"T7329","obj":"T7330"},{"id":"R6110","pred":"nsubj","subj":"T7330","obj":"T7332"},{"id":"R6111","pred":"aux","subj":"T7331","obj":"T7332"},{"id":"R6112","pred":"ccomp","subj":"T7332","obj":"T7327"},{"id":"R6113","pred":"acomp","subj":"T7333","obj":"T7332"},{"id":"R6114","pred":"prep","subj":"T7334","obj":"T7333"},{"id":"R6115","pred":"pobj","subj":"T7335","obj":"T7334"},{"id":"R6116","pred":"prep","subj":"T7336","obj":"T7335"},{"id":"R6117","pred":"compound","subj":"T7337","obj":"T7338"},{"id":"R6118","pred":"pobj","subj":"T7338","obj":"T7336"},{"id":"R6119","pred":"punct","subj":"T7339","obj":"T7327"}],"attributes":[{"subj":"T7325","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7326","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7327","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7328","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7329","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7330","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7331","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7332","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7333","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7334","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7335","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7336","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7337","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7338","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"},{"subj":"T7339","pred":"source","obj":"bionlp-st-ge-2016-spacy-parsed"}]},{"project":"GO-BP","denotations":[{"id":"T7016","span":{"begin":34,"end":45},"obj":"http://purl.obolibrary.org/obo/GO_0032259"},{"id":"T7020","span":{"begin":76,"end":86},"obj":"http://purl.obolibrary.org/obo/GO_0065007"}],"attributes":[{"subj":"T7016","pred":"source","obj":"GO-BP"},{"subj":"T7020","pred":"source","obj":"GO-BP"}]},{"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T7735","span":{"begin":90,"end":95},"obj":"Protein"},{"id":"T7736","span":{"begin":96,"end":106},"obj":"Gene_expression"},{"id":"T7737","span":{"begin":71,"end":86},"obj":"Negative_regulation"}],"relations":[{"id":"R6450","pred":"themeOf","subj":"T7735","obj":"T7736"},{"id":"R6451","pred":"themeOf","subj":"T7736","obj":"T7737"}],"attributes":[{"subj":"T7735","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T7736","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"},{"subj":"T7737","pred":"source","obj":"bionlp-st-ge-2016-reference-tees"}]},{"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T6979","span":{"begin":90,"end":95},"obj":"Protein"},{"id":"T6980","span":{"begin":96,"end":106},"obj":"Gene_expression"}],"relations":[{"id":"R5800","pred":"themeOf","subj":"T6979","obj":"T6980"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"attributes":[{"subj":"T6979","pred":"source","obj":"bionlp-st-ge-2016-reference"},{"subj":"T6980","pred":"source","obj":"bionlp-st-ge-2016-reference"}]},{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T7304","span":{"begin":90,"end":95},"obj":"Q15306"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"attributes":[{"subj":"T7304","pred":"source","obj":"bionlp-st-ge-2016-uniprot"}]},{"project":"test2","denotations":[{"id":"T6945","span":{"begin":55,"end":66},"obj":"Regulation"},{"id":"T6946","span":{"begin":71,"end":86},"obj":"Negative_regulation"},{"id":"T6947","span":{"begin":90,"end":95},"obj":"Protein"},{"id":"T6948","span":{"begin":96,"end":106},"obj":"Gene_expression"}],"relations":[{"id":"R5776","pred":"themeOf","subj":"T6946","obj":"T6945"},{"id":"R5777","pred":"themeOf","subj":"T6947","obj":"T6948"},{"id":"R5778","pred":"themeOf","subj":"T6948","obj":"T6946"}],"attributes":[{"subj":"T6945","pred":"source","obj":"test2"},{"subj":"T6946","pred":"source","obj":"test2"},{"subj":"T6947","pred":"source","obj":"test2"},{"subj":"T6948","pred":"source","obj":"test2"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"bionlp-st-ge-2016-reference-eval","color":"#ec93cd","default":true},{"id":"events-check-again","color":"#93e7ec"},{"id":"sentences","color":"#ecd793"},{"id":"pmc-enju-pas","color":"#bd93ec"},{"id":"bionlp-st-ge-2016-spacy-parsed","color":"#93eca3"},{"id":"GO-BP","color":"#ec939c"},{"id":"bionlp-st-ge-2016-reference-tees","color":"#93b6ec"},{"id":"bionlp-st-ge-2016-reference","color":"#d0ec93"},{"id":"bionlp-st-ge-2016-uniprot","color":"#ec93eb"},{"id":"test2","color":"#93ecd3"}]}]}}