> top > docs > PMC:1208879 > spans > 8671-9438 > annotations

PMC:1208879 / 8671-9438 JSONTXT

Annnotations TAB JSON ListView MergeView

craft-sa-dev

Id Subject Object Predicate Lexical cue
T2480 0-3 DT denotes The
T2481 23-29 NN denotes screen
T2482 4-5 NN denotes C
T2483 6-14 JJ denotes terminal
T2484 5-6 HYPH denotes -
T2485 15-22 NN denotes peptide
T2486 30-34 VBD denotes gave
T2487 35-37 CD denotes 15
T2488 38-46 NNS denotes colonies
T2489 47-51 WDT denotes that
T2490 52-56 VBD denotes were
T2491 57-65 JJ denotes positive
T2492 66-70 IN denotes with
T2493 71-74 DT denotes all
T2494 81-90 NNS denotes reporters
T2495 75-80 CD denotes three
T2496 91-94 CC denotes and
T2497 95-98 DT denotes the
T2498 110-116 NN denotes screen
T2499 99-102 NN denotes PST
T2500 103-109 NN denotes domain
T2501 117-121 VBD denotes gave
T2502 122-124 CD denotes 62
T2503 125-133 NNS denotes colonies
T2504 133-134 . denotes .
T2505 134-205 sentence denotes The interacting plasmids were isolated and the cDNA inserts sequenced.
T2506 135-138 DT denotes The
T2507 151-159 NNS denotes plasmids
T2508 139-150 VBG denotes interacting
T2509 165-173 VBN denotes isolated
T2510 160-164 VBD denotes were
T2511 174-177 CC denotes and
T2512 178-181 DT denotes the
T2513 187-194 NNS denotes inserts
T2514 182-186 NN denotes cDNA
T2515 195-204 VBN denotes sequenced
T2516 204-205 . denotes .
T2517 205-416 sentence denotes Three cDNAs were identified 3 or more times, Homer3 (NM_011984), Dncl1 (Dynein cytoplasmic light chain 1, NM_019682, also known as Pin or Dlc8) and Trim11 (Tripartite motif protein family member 11, NM_053168).
T2518 206-211 CD denotes Three
T2519 212-217 NNS denotes cDNAs
T2520 223-233 VBN denotes identified
T2521 218-222 VBD denotes were
T2522 234-235 CD denotes 3
T2523 244-249 NNS denotes times
T2524 236-238 CC denotes or
T2525 239-243 JJR denotes more
T2526 249-251 , denotes ,
T2527 251-257 NN denotes Homer3
T2528 258-259 -LRB- denotes (
T2529 259-268 NN denotes NM_011984
T2530 268-269 -RRB- denotes )
T2531 269-271 , denotes ,
T2532 271-276 NN denotes Dncl1
T2533 277-278 -LRB- denotes (
T2534 278-284 NNP denotes Dynein
T2535 303-308 NN denotes chain
T2536 285-296 JJ denotes cytoplasmic
T2537 297-302 JJ denotes light
T2538 309-310 CD denotes 1
T2539 310-312 , denotes ,
T2540 312-321 NN denotes NM_019682
T2541 321-323 , denotes ,
T2542 323-327 RB denotes also
T2543 328-333 VBN denotes known
T2544 334-336 IN denotes as
T2545 337-340 NN denotes Pin
T2546 341-343 CC denotes or
T2547 344-348 NN denotes Dlc8
T2548 348-349 -RRB- denotes )
T2549 350-353 CC denotes and
T2550 354-360 NN denotes Trim11
T2551 361-362 -LRB- denotes (
T2552 362-372 JJ denotes Tripartite
T2553 373-378 NN denotes motif
T2554 394-400 NN denotes member
T2555 379-386 NN denotes protein
T2556 387-393 NN denotes family
T2557 401-403 CD denotes 11
T2558 403-405 , denotes ,
T2559 405-414 NN denotes NM_053168
T2560 414-415 -RRB- denotes )
T2561 415-416 . denotes .
T2562 416-505 sentence denotes Homer3 (6 clones) and Dncl1 (2 clones) were identified in the C-terminal peptide screen.
T2563 417-423 NN denotes Homer3
T2564 461-471 VBN denotes identified
T2565 424-425 -LRB- denotes (
T2566 427-433 NNS denotes clones
T2567 425-426 CD denotes 6
T2568 433-434 -RRB- denotes )
T2569 435-438 CC denotes and
T2570 439-444 NN denotes Dncl1
T2571 445-446 -LRB- denotes (
T2572 448-454 NNS denotes clones
T2573 446-447 CD denotes 2
T2574 454-455 -RRB- denotes )
T2575 456-460 VBD denotes were
T2576 472-474 IN denotes in
T2577 475-478 DT denotes the
T2578 498-504 NN denotes screen
T2579 479-480 NN denotes C
T2580 481-489 JJ denotes terminal
T2581 480-481 HYPH denotes -
T2582 490-497 NN denotes peptide
T2583 504-505 . denotes .
T2584 505-605 sentence denotes Homer3 (7 clones), Dncl1 (2 clones) and Trim11 (6 clones) were identified in the PST domain screen.
T2585 506-512 NN denotes Homer3
T2586 569-579 VBN denotes identified
T2587 513-514 -LRB- denotes (
T2588 516-522 NNS denotes clones
T2589 514-515 CD denotes 7
T2590 522-523 -RRB- denotes )
T2591 523-525 , denotes ,
T2592 525-530 NN denotes Dncl1
T2593 531-532 -LRB- denotes (
T2594 534-540 NNS denotes clones
T2595 532-533 CD denotes 2
T2596 540-541 -RRB- denotes )
T2597 542-545 CC denotes and
T2598 546-552 NN denotes Trim11
T2599 553-554 -LRB- denotes (
T2600 556-562 NNS denotes clones
T2601 554-555 CD denotes 6
T2602 562-563 -RRB- denotes )
T2603 564-568 VBD denotes were
T2604 580-582 IN denotes in
T2605 583-586 DT denotes the
T2606 598-604 NN denotes screen
T2607 587-590 NN denotes PST
T2608 591-597 NN denotes domain
T2609 604-605 . denotes .
T2610 605-696 sentence denotes All cDNA inserts were in-frame with the coding region of the pPC86 GAL4 activation domain.
T2611 606-609 DT denotes All
T2612 615-622 NNS denotes inserts
T2613 610-614 NN denotes cDNA
T2614 623-627 VBD denotes were
T2615 628-630 IN denotes in
T2616 630-631 HYPH denotes -
T2617 631-636 NN denotes frame
T2618 637-641 IN denotes with
T2619 642-645 DT denotes the
T2620 653-659 NN denotes region
T2621 646-652 NN denotes coding
T2622 660-662 IN denotes of
T2623 663-666 DT denotes the
T2624 689-695 NN denotes domain
T2625 667-672 NN denotes pPC86
T2626 673-677 NN denotes GAL4
T2627 678-688 NN denotes activation
T2628 695-696 . denotes .
T2629 696-767 sentence denotes None of the cDNAs was present in a list of known false positives [34].
T2630 697-701 NN denotes None
T2631 715-718 VBD denotes was
T2632 702-704 IN denotes of
T2633 705-708 DT denotes the
T2634 709-714 NNS denotes cDNAs
T2635 719-726 JJ denotes present
T2636 727-729 IN denotes in
T2637 730-731 DT denotes a
T2638 732-736 NN denotes list
T2639 737-739 IN denotes of
T2640 740-745 JJ denotes known
T2641 752-761 NNS denotes positives
T2642 746-751 JJ denotes false
T2643 762-763 -LRB- denotes [
T2644 763-765 CD denotes 34
T2645 765-766 -RRB- denotes ]
T2646 766-767 . denotes .
R1491 T2480 T2481 det The,screen
R1492 T2481 T2486 nsubj screen,gave
R1493 T2482 T2483 npadvmod C,terminal
R1494 T2483 T2481 amod terminal,screen
R1495 T2484 T2483 punct -,terminal
R1496 T2485 T2481 compound peptide,screen
R1497 T2487 T2488 nummod 15,colonies
R1498 T2488 T2486 dobj colonies,gave
R1499 T2489 T2490 dep that,were
R1500 T2490 T2488 relcl were,colonies
R1501 T2491 T2490 acomp positive,were
R1502 T2492 T2491 prep with,positive
R1503 T2493 T2494 det all,reporters
R1504 T2494 T2492 pobj reporters,with
R1505 T2495 T2494 nummod three,reporters
R1506 T2496 T2486 cc and,gave
R1507 T2497 T2498 det the,screen
R1508 T2498 T2501 nsubj screen,gave
R1509 T2499 T2498 compound PST,screen
R1510 T2500 T2498 compound domain,screen
R1511 T2501 T2486 conj gave,gave
R1512 T2502 T2503 nummod 62,colonies
R1513 T2503 T2501 dobj colonies,gave
R1514 T2504 T2501 punct .,gave
R1515 T2506 T2507 det The,plasmids
R1516 T2507 T2509 nsubjpass plasmids,isolated
R1517 T2508 T2507 amod interacting,plasmids
R1518 T2510 T2509 auxpass were,isolated
R1519 T2511 T2509 cc and,isolated
R1520 T2512 T2513 det the,inserts
R1521 T2513 T2515 nsubj inserts,sequenced
R1522 T2514 T2513 compound cDNA,inserts
R1523 T2515 T2509 conj sequenced,isolated
R1524 T2516 T2515 punct .,sequenced
R1525 T2518 T2519 nummod Three,cDNAs
R1526 T2519 T2520 nsubjpass cDNAs,identified
R1527 T2521 T2520 auxpass were,identified
R1528 T2522 T2523 nummod 3,times
R1529 T2523 T2520 npadvmod times,identified
R1530 T2524 T2522 cc or,3
R1531 T2525 T2522 conj more,3
R1532 T2526 T2520 punct ", ",identified
R1533 T2527 T2520 dep Homer3,identified
R1534 T2528 T2527 punct (,Homer3
R1535 T2529 T2527 appos NM_011984,Homer3
R1536 T2530 T2527 punct ),Homer3
R1537 T2531 T2527 punct ", ",Homer3
R1538 T2532 T2527 conj Dncl1,Homer3
R1539 T2533 T2532 punct (,Dncl1
R1540 T2534 T2535 nmod Dynein,chain
R1541 T2535 T2532 appos chain,Dncl1
R1542 T2536 T2535 amod cytoplasmic,chain
R1543 T2537 T2535 amod light,chain
R1544 T2538 T2535 nummod 1,chain
R1545 T2539 T2535 punct ", ",chain
R1546 T2540 T2535 appos NM_019682,chain
R1547 T2541 T2535 punct ", ",chain
R1548 T2542 T2543 advmod also,known
R1549 T2543 T2535 acl known,chain
R1550 T2544 T2543 prep as,known
R1551 T2545 T2544 pobj Pin,as
R1552 T2546 T2545 cc or,Pin
R1553 T2547 T2545 conj Dlc8,Pin
R1554 T2548 T2532 punct ),Dncl1
R1555 T2549 T2532 cc and,Dncl1
R1556 T2550 T2532 conj Trim11,Dncl1
R1557 T2551 T2550 punct (,Trim11
R1558 T2552 T2553 amod Tripartite,motif
R1559 T2553 T2554 compound motif,member
R1560 T2554 T2550 appos member,Trim11
R1561 T2555 T2554 compound protein,member
R1562 T2556 T2554 compound family,member
R1563 T2557 T2554 nummod 11,member
R1564 T2558 T2554 punct ", ",member
R1565 T2559 T2554 appos NM_053168,member
R1566 T2560 T2550 punct ),Trim11
R1567 T2561 T2520 punct .,identified
R1568 T2563 T2564 nsubjpass Homer3,identified
R1569 T2565 T2566 punct (,clones
R1570 T2566 T2563 parataxis clones,Homer3
R1571 T2567 T2566 nummod 6,clones
R1572 T2568 T2566 punct ),clones
R1573 T2569 T2563 cc and,Homer3
R1574 T2570 T2563 conj Dncl1,Homer3
R1575 T2571 T2572 punct (,clones
R1576 T2572 T2570 parataxis clones,Dncl1
R1577 T2573 T2572 nummod 2,clones
R1578 T2574 T2572 punct ),clones
R1579 T2575 T2564 auxpass were,identified
R1580 T2576 T2564 prep in,identified
R1581 T2577 T2578 det the,screen
R1582 T2578 T2576 pobj screen,in
R1583 T2579 T2580 npadvmod C,terminal
R1584 T2580 T2578 amod terminal,screen
R1585 T2581 T2580 punct -,terminal
R1586 T2582 T2578 compound peptide,screen
R1587 T2583 T2564 punct .,identified
R1588 T2585 T2586 nsubjpass Homer3,identified
R1589 T2587 T2588 punct (,clones
R1590 T2588 T2585 parataxis clones,Homer3
R1591 T2589 T2588 nummod 7,clones
R1592 T2590 T2588 punct ),clones
R1593 T2591 T2585 punct ", ",Homer3
R1594 T2592 T2585 conj Dncl1,Homer3
R1595 T2593 T2594 punct (,clones
R1596 T2594 T2592 parataxis clones,Dncl1
R1597 T2595 T2594 nummod 2,clones
R1598 T2596 T2594 punct ),clones
R1599 T2597 T2592 cc and,Dncl1
R1600 T2598 T2592 conj Trim11,Dncl1
R1601 T2599 T2600 punct (,clones
R1602 T2600 T2598 parataxis clones,Trim11
R1603 T2601 T2600 nummod 6,clones
R1604 T2602 T2600 punct ),clones
R1605 T2603 T2586 auxpass were,identified
R1606 T2604 T2586 prep in,identified
R1607 T2605 T2606 det the,screen
R1608 T2606 T2604 pobj screen,in
R1609 T2607 T2606 compound PST,screen
R1610 T2608 T2606 compound domain,screen
R1611 T2609 T2586 punct .,identified
R1612 T2611 T2612 det All,inserts
R1613 T2612 T2614 nsubj inserts,were
R1614 T2613 T2612 compound cDNA,inserts
R1615 T2615 T2614 prep in,were
R1616 T2616 T2615 punct -,in
R1617 T2617 T2615 pobj frame,in
R1618 T2618 T2617 prep with,frame
R1619 T2619 T2620 det the,region
R1620 T2620 T2618 pobj region,with
R1621 T2621 T2620 compound coding,region
R1622 T2622 T2620 prep of,region
R1623 T2623 T2624 det the,domain
R1624 T2624 T2622 pobj domain,of
R1625 T2625 T2624 compound pPC86,domain
R1626 T2626 T2624 compound GAL4,domain
R1627 T2627 T2624 compound activation,domain
R1628 T2628 T2614 punct .,were
R1629 T2630 T2631 nsubj None,was
R1630 T2632 T2630 prep of,None
R1631 T2633 T2634 det the,cDNAs
R1632 T2634 T2632 pobj cDNAs,of
R1633 T2635 T2631 acomp present,was
R1634 T2636 T2631 prep in,was
R1635 T2637 T2638 det a,list
R1636 T2638 T2636 pobj list,in
R1637 T2639 T2638 prep of,list
R1638 T2640 T2641 amod known,positives
R1639 T2641 T2639 pobj positives,of
R1640 T2642 T2641 amod false,positives
R1641 T2643 T2644 punct [,34
R1642 T2644 T2631 parataxis 34,was
R1643 T2645 T2644 punct ],34
R1644 T2646 T2631 punct .,was

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T2277 4-14 CHEBI_SO_EXT:C_terminus_or_C_terminal_region denotes C-terminal
T2278 15-22 CHEBI_SO_EXT:peptide_or_peptide_region denotes peptide
T2279 103-109 SO_EXT:0000417 denotes domain
T2280 151-159 SO_EXT:0000155 denotes plasmids
T2281 182-186 SO_EXT:cDNA denotes cDNA
T2282 187-194 SO_EXT:0000667 denotes inserts
T2283 212-217 SO_EXT:cDNA denotes cDNAs
T2284 251-257 PR_EXT:000008680 denotes Homer3
T2285 271-276 PR_EXT:000002325 denotes Dncl1
T2286 278-284 GO:0030286 denotes Dynein
T2287 278-310 PR_EXT:000002325 denotes Dynein cytoplasmic light chain 1
T2288 285-296 GO:0005737 denotes cytoplasmic
T2289 337-340 PR_EXT:000002325 denotes Pin
T2290 344-348 PR_EXT:000002325 denotes Dlc8
T2291 354-360 PR_EXT:000016642 denotes Trim11
T2292 362-403 PR_EXT:000016642 denotes Tripartite motif protein family member 11
T2293 373-378 SO_EXT:sequence_or_structure_motif denotes motif
T2294 379-386 CHEBI_PR_EXT:protein denotes protein
T2295 417-423 PR_EXT:000008680 denotes Homer3
T2296 427-433 SO_EXT:sequence_cloned_entity denotes clones
T2297 439-444 PR_EXT:000002325 denotes Dncl1
T2298 448-454 SO_EXT:sequence_cloned_entity denotes clones
T2299 479-489 CHEBI_SO_EXT:C_terminus_or_C_terminal_region denotes C-terminal
T2300 490-497 CHEBI_SO_EXT:peptide_or_peptide_region denotes peptide
T2301 506-512 PR_EXT:000008680 denotes Homer3
T2302 516-522 SO_EXT:sequence_cloned_entity denotes clones
T2303 525-530 PR_EXT:000002325 denotes Dncl1
T2304 534-540 SO_EXT:sequence_cloned_entity denotes clones
T2305 546-552 PR_EXT:000016642 denotes Trim11
T2306 556-562 SO_EXT:sequence_cloned_entity denotes clones
T2307 591-597 SO_EXT:0000417 denotes domain
T2308 610-614 SO_EXT:cDNA denotes cDNA
T2309 615-622 SO_EXT:0000667 denotes inserts
T2310 628-636 SO:0001817 denotes in-frame
T2311 646-659 SO_EXT:coding_sequence denotes coding region
T2312 673-677 PR_EXT:P04386 denotes GAL4
T2313 689-695 SO_EXT:0000417 denotes domain
T2314 709-714 SO_EXT:cDNA denotes cDNAs

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T2205 103-109 SO:0000417 denotes domain
T2206 151-159 SO:0000155 denotes plasmids
T2207 187-194 SO:0000667 denotes inserts
T2208 251-257 PR:000008680 denotes Homer3
T2209 271-276 PR:000002325 denotes Dncl1
T2210 278-284 GO:0030286 denotes Dynein
T2211 278-310 PR:000002325 denotes Dynein cytoplasmic light chain 1
T2212 285-296 GO:0005737 denotes cytoplasmic
T2213 337-340 PR:000002325 denotes Pin
T2214 344-348 PR:000002325 denotes Dlc8
T2215 354-360 PR:000016642 denotes Trim11
T2216 362-403 PR:000016642 denotes Tripartite motif protein family member 11
T2217 417-423 PR:000008680 denotes Homer3
T2218 439-444 PR:000002325 denotes Dncl1
T2219 506-512 PR:000008680 denotes Homer3
T2220 525-530 PR:000002325 denotes Dncl1
T2221 546-552 PR:000016642 denotes Trim11
T2222 591-597 SO:0000417 denotes domain
T2223 615-622 SO:0000667 denotes inserts
T2224 628-636 SO:0001817 denotes in-frame
T2225 673-677 PR:P04386 denotes GAL4
T2226 689-695 SO:0000417 denotes domain