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PMC:1208879 / 4784-5134 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T1479 0-350 sentence denotes To date only three PAX6 protein-protein interactions have been described: with SOX2 on the lens-specific enhancer element of the δ-crystallin gene [22]; with MDIA, which modulates PAX6 activity in early neuronal development [23], and with MAF proteins on the glucagon promoter, which causes increased expression of this pancreatic hormone gene [17].
T1480 1-3 IN denotes To
T1481 64-73 VBN denotes described
T1482 4-8 NN denotes date
T1483 9-13 RB denotes only
T1484 41-53 NNS denotes interactions
T1485 14-19 CD denotes three
T1486 20-24 NN denotes PAX6
T1487 25-32 NN denotes protein
T1488 33-40 NN denotes protein
T1489 32-33 SYM denotes -
T1490 54-58 VBP denotes have
T1491 59-63 VBN denotes been
T1492 73-75 : denotes :
T1493 75-79 IN denotes with
T1494 80-84 NN denotes SOX2
T1495 85-87 IN denotes on
T1496 88-91 DT denotes the
T1497 115-122 NN denotes element
T1498 92-96 NN denotes lens
T1499 97-105 JJ denotes specific
T1500 96-97 HYPH denotes -
T1501 106-114 NN denotes enhancer
T1502 123-125 IN denotes of
T1503 126-129 DT denotes the
T1504 143-147 NN denotes gene
T1505 130-131 SYM denotes δ
T1506 132-142 NN denotes crystallin
T1507 131-132 HYPH denotes -
T1508 148-149 -LRB- denotes [
T1509 149-151 CD denotes 22
T1510 151-152 -RRB- denotes ]
T1511 152-153 : denotes ;
T1512 154-158 IN denotes with
T1513 159-163 NN denotes MDIA
T1514 163-165 , denotes ,
T1515 165-170 WDT denotes which
T1516 171-180 VBZ denotes modulates
T1517 181-185 NN denotes PAX6
T1518 186-194 NN denotes activity
T1519 195-197 IN denotes in
T1520 198-203 JJ denotes early
T1521 213-224 NN denotes development
T1522 204-212 JJ denotes neuronal
T1523 225-226 -LRB- denotes [
T1524 226-228 CD denotes 23
T1525 228-229 -RRB- denotes ]
T1526 229-231 , denotes ,
T1527 231-234 CC denotes and
T1528 235-239 IN denotes with
T1529 240-243 NN denotes MAF
T1530 244-252 NN denotes proteins
T1531 253-255 IN denotes on
T1532 256-259 DT denotes the
T1533 269-277 NN denotes promoter
T1534 260-268 NN denotes glucagon
T1535 277-279 , denotes ,
T1536 279-284 WDT denotes which
T1537 285-291 VBZ denotes causes
T1538 292-301 VBN denotes increased
T1539 302-312 NN denotes expression
T1540 313-315 IN denotes of
T1541 316-320 DT denotes this
T1542 340-344 NN denotes gene
T1543 321-331 JJ denotes pancreatic
T1544 332-339 NN denotes hormone
T1545 345-346 -LRB- denotes [
T1546 346-348 CD denotes 17
T1547 348-349 -RRB- denotes ]
T1548 349-350 . denotes .
R861 T1480 T1481 prep To,described
R862 T1482 T1480 pobj date,To
R863 T1483 T1484 advmod only,interactions
R864 T1484 T1481 nsubjpass interactions,described
R865 T1485 T1484 nummod three,interactions
R866 T1486 T1484 nmod PAX6,interactions
R867 T1487 T1488 nmod protein,protein
R868 T1488 T1484 compound protein,interactions
R869 T1489 T1488 punct -,protein
R870 T1490 T1481 aux have,described
R871 T1491 T1481 auxpass been,described
R872 T1492 T1481 punct : ,described
R873 T1493 T1481 prep with,described
R874 T1494 T1493 pobj SOX2,with
R875 T1495 T1494 prep on,SOX2
R876 T1496 T1497 det the,element
R877 T1497 T1495 pobj element,on
R878 T1498 T1499 npadvmod lens,specific
R879 T1499 T1497 amod specific,element
R880 T1500 T1499 punct -,specific
R881 T1501 T1497 compound enhancer,element
R882 T1502 T1497 prep of,element
R883 T1503 T1504 det the,gene
R884 T1504 T1502 pobj gene,of
R885 T1505 T1506 punct δ,crystallin
R886 T1506 T1504 compound crystallin,gene
R887 T1507 T1506 punct -,crystallin
R888 T1508 T1509 punct [,22
R889 T1509 T1493 parataxis 22,with
R890 T1510 T1509 punct ],22
R891 T1511 T1493 punct ;,with
R892 T1512 T1493 conj with,with
R893 T1513 T1512 pobj MDIA,with
R894 T1514 T1513 punct ", ",MDIA
R895 T1515 T1516 dep which,modulates
R896 T1516 T1513 relcl modulates,MDIA
R897 T1517 T1518 compound PAX6,activity
R898 T1518 T1516 dobj activity,modulates
R899 T1519 T1516 prep in,modulates
R900 T1520 T1521 amod early,development
R901 T1521 T1519 pobj development,in
R902 T1522 T1521 amod neuronal,development
R903 T1523 T1524 punct [,23
R904 T1524 T1513 parataxis 23,MDIA
R905 T1525 T1524 punct ],23
R906 T1526 T1512 punct ", ",with
R907 T1527 T1512 cc and,with
R908 T1528 T1512 conj with,with
R909 T1529 T1530 compound MAF,proteins
R910 T1530 T1528 pobj proteins,with
R911 T1531 T1530 prep on,proteins
R912 T1532 T1533 det the,promoter
R914 T1533 T1531 pobj promoter,on
R915 T1534 T1533 compound glucagon,promoter
R918 T1535 T1533 punct ", ",promoter
R922 T1536 T1537 dep which,causes
R925 T1537 T1533 relcl causes,promoter
R932 T1538 T1539 amod increased,expression
R935 T1539 T1537 dobj expression,causes
R938 T1540 T1539 prep of,expression
R941 T1541 T1542 det this,gene
R944 T1542 T1540 pobj gene,of
R948 T1543 T1542 amod pancreatic,gene
R951 T1544 T1542 compound hormone,gene
R952 T1545 T1546 punct [,17
R955 T1546 T1528 parataxis 17,with
R957 T1547 T1546 punct ],17
R961 T1548 T1481 punct .,described

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T795 20-24 PR_EXT:000012318 denotes PAX6
T796 25-32 CHEBI_PR_EXT:protein denotes protein
T797 33-40 CHEBI_PR_EXT:protein denotes protein
T798 80-84 PR_EXT:000015426 denotes SOX2
T799 92-96 UBERON_EXT:lens denotes lens
T800 106-114 SO_EXT:0000165 denotes enhancer
T801 143-147 SO_EXT:0000704 denotes gene
T802 171-180 GO:0065007 denotes modulates
T803 181-185 PR_EXT:000012318 denotes PAX6
T804 204-212 CL:0000540 denotes neuronal
T805 204-224 GO_EXT:neuron_development_or_generation denotes neuronal development
T806 244-252 CHEBI_PR_EXT:protein denotes proteins
T807 260-268 CHEBI_PR_EXT:glucagon denotes glucagon
T808 269-277 SO_EXT:0000167 denotes promoter
T809 302-315 _FRAGMENT denotes expression of
T810 340-344 GO:0010467 denotes gene
T811 321-331 UBERON:0001264 denotes pancreatic
T812 332-339 CHEBI_GO_EXT:hormone denotes hormone
T813 340-344 SO_EXT:0000704 denotes gene
R256 T810 T809 _lexicallyChainedTo gene,expression of

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T644 20-24 PR:000012318 denotes PAX6
T645 80-84 PR:000015426 denotes SOX2
T646 106-114 SO:0000165 denotes enhancer
T647 143-147 SO:0000704 denotes gene
T648 171-180 GO:0065007 denotes modulates
T649 181-185 PR:000012318 denotes PAX6
T650 204-212 CL:0000540 denotes neuronal
T651 269-277 SO:0000167 denotes promoter
T652 302-315 _FRAGMENT denotes expression of
T653 340-344 GO:0010467 denotes gene
T654 321-331 UBERON:0001264 denotes pancreatic
T655 340-344 SO:0000704 denotes gene
R253 T653 T652 _lexicallyChainedTo gene,expression of