PMC:1208879 / 11404-12321
Annnotations
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3138 | 49-55 | PR:000008680 | denotes | HOMER3 |
| T3139 | 60-65 | PR:000002325 | denotes | DNCL1 |
| T3140 | 129-135 | PR:000008680 | denotes | HOMER3 |
| T3141 | 137-142 | PR:000002325 | denotes | DNCL1 |
| T3142 | 147-153 | PR:000016642 | denotes | TRIM11 |
| T3143 | 188-194 | SO:0000417 | denotes | domain |
| T3144 | 215-221 | PR:000008680 | denotes | HOMER3 |
| T3145 | 226-231 | PR:000002325 | denotes | DNCL1 |
| T3146 | 288-294 | PR:000016642 | denotes | TRIM11 |
| T3147 | 344-350 | SO:0000417 | denotes | domain |
| T3148 | 520-524 | PR:000012318 | denotes | PAX6 |
| T3149 | 529-535 | PR:000008680 | denotes | HOMER3 |
| T3150 | 537-542 | PR:000002325 | denotes | DNCL1 |
| T3151 | 547-553 | PR:000016642 | denotes | TRIM11 |
| T3152 | 559-564 | PR:000002325 | denotes | Dncl1 |
| T3153 | 569-575 | PR:000016642 | denotes | Trim11 |
| T3154 | 645-651 | PR:000008680 | denotes | Homer3 |
| T3155 | 754-760 | PR:000008680 | denotes | Homer3 |
| T3156 | 788-798 | GO:0010467 | denotes | expression |
| T3157 | 903-909 | PR:000008680 | denotes | Homer3 |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3223 | 39-47 | CHEBI_PR_EXT:protein | denotes | proteins |
| T3224 | 49-55 | PR_EXT:000008680 | denotes | HOMER3 |
| T3225 | 60-65 | PR_EXT:000002325 | denotes | DNCL1 |
| T3226 | 90-100 | CHEBI_SO_EXT:C_terminus_or_C_terminal_region | denotes | C-terminal |
| T3227 | 101-108 | CHEBI_SO_EXT:peptide_or_peptide_region | denotes | peptide |
| T3228 | 119-127 | CHEBI_PR_EXT:protein | denotes | proteins |
| T3229 | 129-135 | PR_EXT:000008680 | denotes | HOMER3 |
| T3230 | 137-142 | PR_EXT:000002325 | denotes | DNCL1 |
| T3231 | 147-153 | PR_EXT:000016642 | denotes | TRIM11 |
| T3232 | 188-194 | SO_EXT:0000417 | denotes | domain |
| T3233 | 215-221 | PR_EXT:000008680 | denotes | HOMER3 |
| T3234 | 226-231 | PR_EXT:000002325 | denotes | DNCL1 |
| T3235 | 263-273 | CHEBI_SO_EXT:C_terminus_or_C_terminal_region | denotes | C-terminal |
| T3236 | 274-281 | CHEBI_SO_EXT:peptide_or_peptide_region | denotes | peptide |
| T3237 | 288-294 | PR_EXT:000016642 | denotes | TRIM11 |
| T3238 | 317-327 | CHEBI_SO_EXT:N_terminus_or_N_terminal_region | denotes | N-terminal |
| T3239 | 344-350 | SO_EXT:0000417 | denotes | domain |
| T3240 | 397-407 | SO_EXT:engineered_biological_sequence | denotes | constructs |
| T3241 | 520-524 | PR_EXT:000012318 | denotes | PAX6 |
| T3242 | 529-535 | PR_EXT:000008680 | denotes | HOMER3 |
| T3243 | 537-542 | PR_EXT:000002325 | denotes | DNCL1 |
| T3244 | 547-553 | PR_EXT:000016642 | denotes | TRIM11 |
| T3245 | 559-564 | PR_EXT:000002325 | denotes | Dncl1 |
| T3246 | 569-575 | PR_EXT:000016642 | denotes | Trim11 |
| T3247 | 576-582 | SO_EXT:sequence_cloned_entity | denotes | clones |
| T3248 | 645-651 | PR_EXT:000008680 | denotes | Homer3 |
| T3249 | 652-657 | SO_EXT:cDNA | denotes | cDNAs |
| T3250 | 669-679 | CHEBI_SO_EXT:N_terminus_or_N_terminal_region | denotes | N-terminal |
| T3251 | 683-694 | CHEBI_SO_EXT:amino_acid | denotes | amino acids |
| T3252 | 708-721 | SO_EXT:coding_sequence | denotes | coding region |
| T3253 | 726-734 | SO_EXT:sequence_insertion_process | denotes | inserted |
| T3254 | 744-753 | SO_EXT:sequence_truncation_process | denotes | truncated |
| T3255 | 754-760 | PR_EXT:000008680 | denotes | Homer3 |
| T3256 | 761-765 | SO_EXT:cDNA | denotes | cDNA |
| T3257 | 788-798 | GO:0010467 | denotes | expression |
| T3258 | 799-808 | SO_EXT:engineered_biological_sequence | denotes | construct |
| T3259 | 893-902 | SO_EXT:sequence_truncation_process | denotes | truncated |
| T3260 | 903-909 | PR_EXT:000008680 | denotes | Homer3 |
| T3261 | 910-916 | SO_EXT:sequence_cloned_entity | denotes | clones |
craft-sa-dev
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3389 | 0-2 | IN | denotes | By |
| T3390 | 24-34 | VBD | denotes | identified |
| T3391 | 3-10 | NN | denotes | library |
| T3392 | 11-20 | NN | denotes | screening |
| T3393 | 21-23 | PRP | denotes | we |
| T3394 | 35-38 | CD | denotes | two |
| T3395 | 39-47 | NN | denotes | proteins |
| T3396 | 48-49 | -LRB- | denotes | ( |
| T3397 | 49-55 | NN | denotes | HOMER3 |
| T3398 | 56-59 | CC | denotes | and |
| T3399 | 60-65 | NN | denotes | DNCL1 |
| T3400 | 65-66 | -RRB- | denotes | ) |
| T3401 | 67-71 | WDT | denotes | that |
| T3402 | 72-80 | VBP | denotes | interact |
| T3403 | 81-85 | IN | denotes | with |
| T3404 | 86-89 | DT | denotes | the |
| T3405 | 101-108 | NN | denotes | peptide |
| T3406 | 90-91 | NN | denotes | C |
| T3407 | 92-100 | JJ | denotes | terminal |
| T3408 | 91-92 | HYPH | denotes | - |
| T3409 | 109-112 | CC | denotes | and |
| T3410 | 113-118 | CD | denotes | three |
| T3411 | 119-127 | NN | denotes | proteins |
| T3412 | 128-129 | -LRB- | denotes | ( |
| T3413 | 129-135 | NN | denotes | HOMER3 |
| T3414 | 135-137 | , | denotes | , |
| T3415 | 137-142 | NN | denotes | DNCL1 |
| T3416 | 143-146 | CC | denotes | and |
| T3417 | 147-153 | NN | denotes | TRIM11 |
| T3418 | 153-154 | -RRB- | denotes | ) |
| T3419 | 155-159 | WDT | denotes | that |
| T3420 | 160-168 | VBP | denotes | interact |
| T3421 | 169-173 | IN | denotes | with |
| T3422 | 174-177 | DT | denotes | the |
| T3423 | 188-194 | NN | denotes | domain |
| T3424 | 178-183 | JJ | denotes | whole |
| T3425 | 184-187 | NN | denotes | PST |
| T3426 | 194-195 | . | denotes | . |
| T3427 | 195-351 | sentence | denotes | This suggests that HOMER3 and DNCL1 interact specifically with the C-terminal peptide while TRIM11 interacts with a more N-terminal part of the PST domain. |
| T3428 | 196-200 | DT | denotes | This |
| T3429 | 201-209 | VBZ | denotes | suggests |
| T3430 | 210-214 | IN | denotes | that |
| T3431 | 232-240 | VBP | denotes | interact |
| T3432 | 215-221 | NN | denotes | HOMER3 |
| T3433 | 222-225 | CC | denotes | and |
| T3434 | 226-231 | NN | denotes | DNCL1 |
| T3435 | 241-253 | RB | denotes | specifically |
| T3436 | 254-258 | IN | denotes | with |
| T3437 | 259-262 | DT | denotes | the |
| T3438 | 274-281 | NN | denotes | peptide |
| T3439 | 263-264 | NN | denotes | C |
| T3440 | 265-273 | JJ | denotes | terminal |
| T3441 | 264-265 | HYPH | denotes | - |
| T3442 | 282-287 | IN | denotes | while |
| T3443 | 295-304 | VBZ | denotes | interacts |
| T3444 | 288-294 | NN | denotes | TRIM11 |
| T3445 | 305-309 | IN | denotes | with |
| T3446 | 310-311 | DT | denotes | a |
| T3447 | 328-332 | NN | denotes | part |
| T3448 | 312-316 | RBR | denotes | more |
| T3449 | 319-327 | JJ | denotes | terminal |
| T3450 | 317-318 | NN | denotes | N |
| T3451 | 318-319 | HYPH | denotes | - |
| T3452 | 333-335 | IN | denotes | of |
| T3453 | 336-339 | DT | denotes | the |
| T3454 | 344-350 | NN | denotes | domain |
| T3455 | 340-343 | NN | denotes | PST |
| T3456 | 350-351 | . | denotes | . |
| T3457 | 351-554 | sentence | denotes | We conducted pairwise tests between specific constructs to confirm the interactions identified in the library screen and to further investigate the interaction between PAX6 and HOMER3, DNCL1 and TRIM11. |
| T3458 | 352-354 | PRP | denotes | We |
| T3459 | 355-364 | VBD | denotes | conducted |
| T3460 | 365-373 | JJ | denotes | pairwise |
| T3461 | 374-379 | NNS | denotes | tests |
| T3462 | 380-387 | IN | denotes | between |
| T3463 | 388-396 | JJ | denotes | specific |
| T3464 | 397-407 | NNS | denotes | constructs |
| T3465 | 408-410 | TO | denotes | to |
| T3466 | 411-418 | VB | denotes | confirm |
| T3467 | 419-422 | DT | denotes | the |
| T3468 | 423-435 | NNS | denotes | interactions |
| T3469 | 436-446 | VBN | denotes | identified |
| T3470 | 447-449 | IN | denotes | in |
| T3471 | 450-453 | DT | denotes | the |
| T3472 | 462-468 | NN | denotes | screen |
| T3473 | 454-461 | NN | denotes | library |
| T3474 | 469-472 | CC | denotes | and |
| T3475 | 473-475 | TO | denotes | to |
| T3476 | 484-495 | VB | denotes | investigate |
| T3477 | 476-483 | RB | denotes | further |
| T3478 | 496-499 | DT | denotes | the |
| T3479 | 500-511 | NN | denotes | interaction |
| T3480 | 512-519 | IN | denotes | between |
| T3481 | 520-524 | NN | denotes | PAX6 |
| T3482 | 525-528 | CC | denotes | and |
| T3483 | 529-535 | NN | denotes | HOMER3 |
| T3484 | 535-537 | , | denotes | , |
| T3485 | 537-542 | NN | denotes | DNCL1 |
| T3486 | 543-546 | CC | denotes | and |
| T3487 | 547-553 | NN | denotes | TRIM11 |
| T3488 | 553-554 | . | denotes | . |
| T3489 | 554-695 | sentence | denotes | The Dncl1 and Trim11 clones that were pulled out of the library were full-length, but the Homer3 cDNAs lacked the N-terminal 70 amino acids. |
| T3490 | 555-558 | DT | denotes | The |
| T3491 | 576-582 | NNS | denotes | clones |
| T3492 | 559-564 | NN | denotes | Dncl1 |
| T3493 | 565-568 | CC | denotes | and |
| T3494 | 569-575 | NN | denotes | Trim11 |
| T3495 | 619-623 | VBD | denotes | were |
| T3496 | 583-587 | WDT | denotes | that |
| T3497 | 593-599 | VBN | denotes | pulled |
| T3498 | 588-592 | VBD | denotes | were |
| T3499 | 600-603 | IN | denotes | out |
| T3500 | 604-606 | IN | denotes | of |
| T3501 | 607-610 | DT | denotes | the |
| T3502 | 611-618 | NN | denotes | library |
| T3503 | 624-628 | JJ | denotes | full |
| T3504 | 629-635 | NN | denotes | length |
| T3505 | 628-629 | HYPH | denotes | - |
| T3506 | 635-637 | , | denotes | , |
| T3507 | 637-640 | CC | denotes | but |
| T3508 | 641-644 | DT | denotes | the |
| T3509 | 652-657 | NNS | denotes | cDNAs |
| T3510 | 645-651 | NN | denotes | Homer3 |
| T3511 | 658-664 | VBD | denotes | lacked |
| T3512 | 665-668 | DT | denotes | the |
| T3513 | 689-694 | NNS | denotes | acids |
| T3514 | 669-670 | NN | denotes | N |
| T3515 | 671-679 | JJ | denotes | terminal |
| T3516 | 670-671 | HYPH | denotes | - |
| T3517 | 680-682 | CD | denotes | 70 |
| T3518 | 683-688 | NN | denotes | amino |
| T3519 | 694-695 | . | denotes | . |
| T3520 | 695-823 | sentence | denotes | The missing coding region was inserted into the truncated Homer3 cDNA to give a full-length expression construct (see Methods). |
| T3521 | 696-699 | DT | denotes | The |
| T3522 | 715-721 | NN | denotes | region |
| T3523 | 700-707 | JJ | denotes | missing |
| T3524 | 708-714 | NN | denotes | coding |
| T3525 | 726-734 | VBN | denotes | inserted |
| T3526 | 722-725 | VBD | denotes | was |
| T3527 | 735-739 | IN | denotes | into |
| T3528 | 740-743 | DT | denotes | the |
| T3529 | 761-765 | NN | denotes | cDNA |
| T3530 | 744-753 | VBN | denotes | truncated |
| T3531 | 754-760 | NN | denotes | Homer3 |
| T3532 | 766-768 | TO | denotes | to |
| T3533 | 769-773 | VB | denotes | give |
| T3534 | 774-775 | DT | denotes | a |
| T3535 | 799-808 | NN | denotes | construct |
| T3536 | 776-780 | JJ | denotes | full |
| T3537 | 781-787 | NN | denotes | length |
| T3538 | 780-781 | HYPH | denotes | - |
| T3539 | 788-798 | NN | denotes | expression |
| T3540 | 809-810 | -LRB- | denotes | ( |
| T3541 | 810-813 | VB | denotes | see |
| T3542 | 814-821 | NNS | denotes | Methods |
| T3543 | 821-822 | -RRB- | denotes | ) |
| T3544 | 822-823 | . | denotes | . |
| T3545 | 823-917 | sentence | denotes | Pairwise interactions were carried out with both the full-length and truncated Homer3 clones. |
| T3546 | 824-832 | JJ | denotes | Pairwise |
| T3547 | 833-845 | NNS | denotes | interactions |
| T3548 | 851-858 | VBN | denotes | carried |
| T3549 | 846-850 | VBD | denotes | were |
| T3550 | 859-862 | RP | denotes | out |
| T3551 | 863-867 | IN | denotes | with |
| T3552 | 868-872 | CC | denotes | both |
| T3553 | 910-916 | NNS | denotes | clones |
| T3554 | 873-876 | DT | denotes | the |
| T3555 | 877-881 | JJ | denotes | full |
| T3556 | 882-888 | NN | denotes | length |
| T3557 | 881-882 | HYPH | denotes | - |
| T3558 | 889-892 | CC | denotes | and |
| T3559 | 893-902 | VBN | denotes | truncated |
| T3560 | 903-909 | NN | denotes | Homer3 |
| T3561 | 916-917 | . | denotes | . |
| R1916 | T3389 | T3390 | prep | By,identified |
| R1917 | T3391 | T3392 | compound | library,screening |
| R1918 | T3392 | T3389 | pobj | screening,By |
| R1919 | T3393 | T3390 | nsubj | we,identified |
| R1920 | T3394 | T3395 | nummod | two,proteins |
| R1921 | T3395 | T3390 | dobj | proteins,identified |
| R1922 | T3396 | T3395 | punct | (,proteins |
| R1923 | T3397 | T3395 | appos | HOMER3,proteins |
| R1924 | T3398 | T3397 | cc | and,HOMER3 |
| R1925 | T3399 | T3397 | conj | DNCL1,HOMER3 |
| R1926 | T3400 | T3395 | punct | ),proteins |
| R1927 | T3401 | T3402 | dep | that,interact |
| R1928 | T3402 | T3395 | relcl | interact,proteins |
| R1929 | T3403 | T3402 | prep | with,interact |
| R1930 | T3404 | T3405 | det | the,peptide |
| R1931 | T3405 | T3403 | pobj | peptide,with |
| R1932 | T3406 | T3407 | npadvmod | C,terminal |
| R1933 | T3407 | T3405 | amod | terminal,peptide |
| R1934 | T3408 | T3407 | punct | -,terminal |
| R1935 | T3409 | T3405 | cc | and,peptide |
| R1936 | T3410 | T3411 | nummod | three,proteins |
| R1937 | T3411 | T3405 | conj | proteins,peptide |
| R1938 | T3412 | T3411 | punct | (,proteins |
| R1939 | T3413 | T3411 | appos | HOMER3,proteins |
| R1940 | T3414 | T3413 | punct | ", ",HOMER3 |
| R1941 | T3415 | T3413 | conj | DNCL1,HOMER3 |
| R1942 | T3416 | T3415 | cc | and,DNCL1 |
| R1943 | T3417 | T3415 | conj | TRIM11,DNCL1 |
| R1944 | T3418 | T3411 | punct | ),proteins |
| R1945 | T3419 | T3420 | dep | that,interact |
| R1946 | T3420 | T3411 | relcl | interact,proteins |
| R1947 | T3421 | T3420 | prep | with,interact |
| R1948 | T3422 | T3423 | det | the,domain |
| R1949 | T3423 | T3421 | pobj | domain,with |
| R1950 | T3424 | T3423 | amod | whole,domain |
| R1951 | T3425 | T3423 | compound | PST,domain |
| R1952 | T3426 | T3390 | punct | .,identified |
| R1953 | T3428 | T3429 | nsubj | This,suggests |
| R1954 | T3430 | T3431 | mark | that,interact |
| R1955 | T3431 | T3429 | ccomp | interact,suggests |
| R1956 | T3432 | T3431 | nsubj | HOMER3,interact |
| R1957 | T3433 | T3432 | cc | and,HOMER3 |
| R1958 | T3434 | T3432 | conj | DNCL1,HOMER3 |
| R1959 | T3435 | T3436 | advmod | specifically,with |
| R1960 | T3436 | T3431 | prep | with,interact |
| R1961 | T3437 | T3438 | det | the,peptide |
| R1962 | T3438 | T3436 | pobj | peptide,with |
| R1963 | T3439 | T3440 | npadvmod | C,terminal |
| R1964 | T3440 | T3438 | amod | terminal,peptide |
| R1965 | T3441 | T3440 | punct | -,terminal |
| R1966 | T3442 | T3443 | mark | while,interacts |
| R1967 | T3443 | T3431 | advcl | interacts,interact |
| R1968 | T3444 | T3443 | nsubj | TRIM11,interacts |
| R1969 | T3445 | T3443 | prep | with,interacts |
| R1970 | T3446 | T3447 | det | a,part |
| R1971 | T3447 | T3445 | pobj | part,with |
| R1972 | T3448 | T3449 | advmod | more,terminal |
| R1973 | T3449 | T3447 | amod | terminal,part |
| R1974 | T3450 | T3449 | npadvmod | N,terminal |
| R1975 | T3451 | T3449 | punct | -,terminal |
| R1976 | T3452 | T3447 | prep | of,part |
| R1977 | T3453 | T3454 | det | the,domain |
| R1978 | T3454 | T3452 | pobj | domain,of |
| R1979 | T3455 | T3454 | compound | PST,domain |
| R1980 | T3456 | T3429 | punct | .,suggests |
| R1981 | T3458 | T3459 | nsubj | We,conducted |
| R1982 | T3460 | T3461 | amod | pairwise,tests |
| R1983 | T3461 | T3459 | dobj | tests,conducted |
| R1984 | T3462 | T3461 | prep | between,tests |
| R1985 | T3463 | T3464 | amod | specific,constructs |
| R1986 | T3464 | T3462 | pobj | constructs,between |
| R1987 | T3465 | T3466 | aux | to,confirm |
| R1988 | T3466 | T3459 | advcl | confirm,conducted |
| R1989 | T3467 | T3468 | det | the,interactions |
| R1990 | T3468 | T3466 | dobj | interactions,confirm |
| R1991 | T3469 | T3468 | acl | identified,interactions |
| R1992 | T3470 | T3469 | prep | in,identified |
| R1993 | T3471 | T3472 | det | the,screen |
| R1994 | T3472 | T3470 | pobj | screen,in |
| R1995 | T3473 | T3472 | compound | library,screen |
| R1996 | T3474 | T3466 | cc | and,confirm |
| R1997 | T3475 | T3476 | aux | to,investigate |
| R1998 | T3476 | T3466 | conj | investigate,confirm |
| R1999 | T3477 | T3476 | advmod | further,investigate |
| R2000 | T3478 | T3479 | det | the,interaction |
| R2001 | T3479 | T3476 | dobj | interaction,investigate |
| R2002 | T3480 | T3479 | prep | between,interaction |
| R2003 | T3481 | T3480 | pobj | PAX6,between |
| R2004 | T3482 | T3481 | cc | and,PAX6 |
| R2005 | T3483 | T3481 | conj | HOMER3,PAX6 |
| R2006 | T3484 | T3481 | punct | ", ",PAX6 |
| R2007 | T3485 | T3481 | appos | DNCL1,PAX6 |
| R2008 | T3486 | T3485 | cc | and,DNCL1 |
| R2009 | T3487 | T3485 | conj | TRIM11,DNCL1 |
| R2010 | T3488 | T3459 | punct | .,conducted |
| R2011 | T3490 | T3491 | det | The,clones |
| R2012 | T3491 | T3495 | nsubj | clones,were |
| R2013 | T3492 | T3491 | nmod | Dncl1,clones |
| R2014 | T3493 | T3492 | cc | and,Dncl1 |
| R2015 | T3494 | T3492 | conj | Trim11,Dncl1 |
| R2016 | T3496 | T3497 | dep | that,pulled |
| R2017 | T3497 | T3491 | relcl | pulled,clones |
| R2018 | T3498 | T3497 | auxpass | were,pulled |
| R2019 | T3499 | T3497 | prep | out,pulled |
| R2020 | T3500 | T3499 | prep | of,out |
| R2021 | T3501 | T3502 | det | the,library |
| R2022 | T3502 | T3500 | pobj | library,of |
| R2023 | T3503 | T3504 | amod | full,length |
| R2024 | T3504 | T3495 | attr | length,were |
| R2025 | T3505 | T3504 | punct | -,length |
| R2026 | T3506 | T3495 | punct | ", ",were |
| R2027 | T3507 | T3495 | cc | but,were |
| R2028 | T3508 | T3509 | det | the,cDNAs |
| R2029 | T3509 | T3511 | nsubj | cDNAs,lacked |
| R2030 | T3510 | T3509 | compound | Homer3,cDNAs |
| R2031 | T3511 | T3495 | conj | lacked,were |
| R2032 | T3512 | T3513 | det | the,acids |
| R2033 | T3513 | T3511 | dobj | acids,lacked |
| R2034 | T3514 | T3515 | npadvmod | N,terminal |
| R2035 | T3515 | T3513 | amod | terminal,acids |
| R2036 | T3516 | T3515 | punct | -,terminal |
| R2037 | T3517 | T3513 | nummod | 70,acids |
| R2038 | T3518 | T3513 | compound | amino,acids |
| R2039 | T3519 | T3511 | punct | .,lacked |
| R2040 | T3521 | T3522 | det | The,region |
| R2041 | T3522 | T3525 | nsubjpass | region,inserted |
| R2042 | T3523 | T3522 | amod | missing,region |
| R2043 | T3524 | T3522 | compound | coding,region |
| R2044 | T3526 | T3525 | auxpass | was,inserted |
| R2045 | T3527 | T3525 | prep | into,inserted |
| R2046 | T3528 | T3529 | det | the,cDNA |
| R2047 | T3529 | T3527 | pobj | cDNA,into |
| R2048 | T3530 | T3529 | amod | truncated,cDNA |
| R2049 | T3531 | T3529 | compound | Homer3,cDNA |
| R2050 | T3532 | T3533 | aux | to,give |
| R2051 | T3533 | T3525 | advcl | give,inserted |
| R2052 | T3534 | T3535 | det | a,construct |
| R2053 | T3535 | T3533 | dobj | construct,give |
| R2054 | T3536 | T3537 | amod | full,length |
| R2055 | T3537 | T3535 | compound | length,construct |
| R2056 | T3538 | T3537 | punct | -,length |
| R2057 | T3539 | T3535 | compound | expression,construct |
| R2058 | T3540 | T3541 | punct | (,see |
| R2059 | T3541 | T3525 | parataxis | see,inserted |
| R2060 | T3542 | T3541 | dobj | Methods,see |
| R2061 | T3543 | T3541 | punct | ),see |
| R2062 | T3544 | T3525 | punct | .,inserted |
| R2063 | T3546 | T3547 | amod | Pairwise,interactions |
| R2064 | T3547 | T3548 | nsubjpass | interactions,carried |
| R2065 | T3549 | T3548 | auxpass | were,carried |
| R2066 | T3550 | T3548 | prt | out,carried |
| R2067 | T3551 | T3548 | prep | with,carried |
| R2068 | T3552 | T3553 | preconj | both,clones |
| R2069 | T3553 | T3551 | pobj | clones,with |
| R2070 | T3554 | T3553 | det | the,clones |
| R2071 | T3555 | T3556 | amod | full,length |
| R2072 | T3556 | T3553 | nmod | length,clones |
| R2073 | T3557 | T3556 | punct | -,length |
| R2074 | T3558 | T3556 | cc | and,length |
| R2075 | T3559 | T3556 | conj | truncated,length |
| R2076 | T3560 | T3553 | compound | Homer3,clones |
| R2077 | T3561 | T3548 | punct | .,carried |