PMC:1189074 / 12478-13069
Annnotations
craft-sa-dev
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3025 | 590-591 | . | denotes | . |
| T3024 | 589-590 | -RRB- | denotes | ) |
| T3023 | 580-583 | RB | denotes | not |
| T3022 | 575-579 | NNS | denotes | data |
| T3021 | 584-589 | VBN | denotes | shown |
| T3020 | 574-575 | -LRB- | denotes | ( |
| T3019 | 564-573 | NNS | denotes | genotypes |
| T3018 | 559-563 | NN | denotes | MCAD |
| T3017 | 551-558 | IN | denotes | between |
| T3016 | 527-538 | JJ | denotes | significant |
| T3015 | 539-550 | NNS | denotes | differences |
| T3014 | 524-526 | DT | denotes | no |
| T3013 | 518-523 | VBD | denotes | found |
| T3012 | 514-517 | CC | denotes | and |
| T3011 | 487-498 | JJ | denotes | acetoacetic |
| T3010 | 483-486 | CC | denotes | and |
| T3009 | 499-513 | NNS | denotes | concentrations |
| T3008 | 467-468 | HYPH | denotes | - |
| T3007 | 468-482 | JJ | denotes | hydroxybutyric |
| T3006 | 466-467 | NN | denotes | β |
| T3005 | 451-455 | RB | denotes | also |
| T3004 | 456-465 | VBD | denotes | evaluated |
| T3003 | 448-450 | PRP | denotes | We |
| T3002 | 447-591 | sentence | denotes | We also evaluated β-hydroxybutyric and acetoacetic concentrations and found no significant differences between MCAD genotypes (data not shown). |
| T3001 | 446-447 | . | denotes | . |
| T3000 | 436-446 | NN | denotes | deficiency |
| T2999 | 431-435 | NN | denotes | MCAD |
| T2998 | 428-430 | IN | denotes | to |
| T2997 | 419-427 | JJ | denotes | specific |
| T2996 | 415-418 | RB | denotes | not |
| T2995 | 412-414 | VBZ | denotes | is |
| T2994 | 407-411 | NN | denotes | acid |
| T2993 | 400-406 | JJ | denotes | Adipic |
| T2992 | 399-447 | sentence | denotes | Adipic acid is not specific to MCAD deficiency. |
| T2991 | 398-399 | . | denotes | . |
| T2990 | 397-398 | -RRB- | denotes | ) |
| T2989 | 396-397 | CD | denotes | 1 |
| T2988 | 390-395 | NN | denotes | Table |
| T2987 | 389-390 | -LRB- | denotes | ( |
| T2986 | 375-382 | JJ | denotes | organic |
| T2985 | 370-374 | JJ | denotes | same |
| T2984 | 383-388 | NNS | denotes | acids |
| T2983 | 366-369 | DT | denotes | the |
| T2982 | 363-365 | IN | denotes | of |
| T2981 | 344-354 | JJ | denotes | detectable |
| T2980 | 355-362 | NNS | denotes | amounts |
| T2979 | 341-343 | DT | denotes | no |
| T2978 | 338-340 | IN | denotes | to |
| T2977 | 332-337 | NN | denotes | trace |
| T2976 | 325-331 | VBD | denotes | showed |
| T2975 | 319-324 | WDT | denotes | which |
| T2974 | 317-319 | , | denotes | , |
| T2973 | 307-308 | SYM | denotes | + |
| T2972 | 306-307 | HYPH | denotes | / |
| T2971 | 305-306 | SYM | denotes | + |
| T2970 | 309-317 | NNS | denotes | controls |
| T2969 | 301-305 | NN | denotes | MCAD |
| T2968 | 298-300 | IN | denotes | to |
| T2967 | 289-297 | VBN | denotes | compared |
| T2966 | 286-288 | IN | denotes | as |
| T2965 | 270-285 | NN | denotes | hexanoylglycine |
| T2964 | 266-269 | CC | denotes | and |
| T2963 | 252-259 | JJ | denotes | sebacic |
| T2962 | 248-251 | CC | denotes | and |
| T2961 | 246-248 | , | denotes | , |
| T2960 | 239-246 | JJ | denotes | suberic |
| T2959 | 237-239 | , | denotes | , |
| T2958 | 260-265 | NNS | denotes | acids |
| T2957 | 231-237 | JJ | denotes | adipic |
| T2956 | 228-230 | IN | denotes | of |
| T2955 | 213-227 | NNS | denotes | concentrations |
| T2954 | 204-212 | VBN | denotes | elevated |
| T2953 | 190-203 | RB | denotes | significantly |
| T2952 | 173-174 | SYM | denotes | − |
| T2951 | 172-173 | HYPH | denotes | / |
| T2950 | 171-172 | SYM | denotes | − |
| T2949 | 175-179 | NNS | denotes | mice |
| T2948 | 167-171 | NN | denotes | MCAD |
| T2947 | 165-167 | , | denotes | , |
| T2946 | 164-165 | NN | denotes | h |
| T2945 | 161-163 | CD | denotes | 18 |
| T2944 | 157-160 | IN | denotes | for |
| T2943 | 150-156 | VBN | denotes | fasted |
| T2942 | 145-149 | WRB | denotes | when |
| T2941 | 143-145 | , | denotes | , |
| T2940 | 180-189 | VBD | denotes | developed |
| T2939 | 131-143 | RB | denotes | Specifically |
| T2938 | 130-399 | sentence | denotes | Specifically, when fasted for 18 h, MCAD−/− mice developed significantly elevated concentrations of adipic, suberic, and sebacic acids and hexanoylglycine as compared to MCAD+/+ controls, which showed trace to no detectable amounts of the same organic acids (Table 1). |
| T2937 | 129-130 | . | denotes | . |
| T2936 | 115-120 | JJ | denotes | human |
| T2935 | 121-129 | NNS | denotes | patients |
| T2934 | 104-105 | HYPH | denotes | - |
| T2933 | 105-114 | JJ | denotes | deficient |
| T2932 | 100-104 | NN | denotes | MCAD |
| T2931 | 97-99 | IN | denotes | to |
| T2930 | 89-96 | JJ | denotes | similar |
| T2929 | 76-80 | NN | denotes | acid |
| T2928 | 68-75 | JJ | denotes | organic |
| T2927 | 81-88 | NN | denotes | profile |
| T2926 | 65-67 | DT | denotes | an |
| T2925 | 48-49 | SYM | denotes | − |
| T2924 | 47-48 | HYPH | denotes | / |
| T2923 | 46-47 | SYM | denotes | − |
| T2922 | 50-54 | NNS | denotes | mice |
| T2921 | 42-46 | NN | denotes | MCAD |
| T2920 | 55-64 | VBD | denotes | developed |
| T2919 | 37-41 | IN | denotes | that |
| T2918 | 28-36 | VBD | denotes | revealed |
| T2917 | 19-27 | NN | denotes | analysis |
| T2916 | 6-13 | JJ | denotes | organic |
| T2915 | 14-18 | NN | denotes | acid |
| T2914 | 0-5 | NN | denotes | Urine |
| R1816 | T2914 | T2915 | nmod | Urine,acid |
| R1817 | T2915 | T2917 | compound | acid,analysis |
| R1818 | T2916 | T2915 | amod | organic,acid |
| R1819 | T2917 | T2918 | nsubj | analysis,revealed |
| R1820 | T2919 | T2920 | mark | that,developed |
| R1821 | T2920 | T2918 | ccomp | developed,revealed |
| R1822 | T2921 | T2922 | nmod | MCAD,mice |
| R1823 | T2922 | T2920 | nsubj | mice,developed |
| R1824 | T2923 | T2921 | punct | −,MCAD |
| R1825 | T2924 | T2921 | punct | /,MCAD |
| R1826 | T2925 | T2921 | punct | −,MCAD |
| R1827 | T2926 | T2927 | det | an,profile |
| R1828 | T2927 | T2920 | dobj | profile,developed |
| R1829 | T2928 | T2929 | amod | organic,acid |
| R1830 | T2929 | T2927 | compound | acid,profile |
| R1831 | T2930 | T2927 | amod | similar,profile |
| R1832 | T2931 | T2930 | prep | to,similar |
| R1833 | T2932 | T2933 | npadvmod | MCAD,deficient |
| R1834 | T2933 | T2935 | amod | deficient,patients |
| R1835 | T2934 | T2933 | punct | -,deficient |
| R1836 | T2935 | T2931 | pobj | patients,to |
| R1837 | T2936 | T2935 | amod | human,patients |
| R1838 | T2937 | T2918 | punct | .,revealed |
| R1839 | T2939 | T2940 | advmod | Specifically,developed |
| R1840 | T2941 | T2940 | punct | ", ",developed |
| R1841 | T2942 | T2943 | advmod | when,fasted |
| R1842 | T2943 | T2940 | advcl | fasted,developed |
| R1843 | T2944 | T2943 | prep | for,fasted |
| R1844 | T2945 | T2946 | nummod | 18,h |
| R1845 | T2946 | T2944 | pobj | h,for |
| R1846 | T2947 | T2940 | punct | ", ",developed |
| R1847 | T2948 | T2949 | nmod | MCAD,mice |
| R1848 | T2949 | T2940 | nsubj | mice,developed |
| R1849 | T2950 | T2948 | punct | −,MCAD |
| R1850 | T2951 | T2948 | punct | /,MCAD |
| R1851 | T2952 | T2948 | punct | −,MCAD |
| R1852 | T2953 | T2954 | advmod | significantly,elevated |
| R1853 | T2954 | T2955 | amod | elevated,concentrations |
| R1854 | T2955 | T2940 | dobj | concentrations,developed |
| R1855 | T2956 | T2955 | prep | of,concentrations |
| R1856 | T2957 | T2958 | amod | adipic,acids |
| R1857 | T2958 | T2956 | pobj | acids,of |
| R1858 | T2959 | T2957 | punct | ", ",adipic |
| R1859 | T2960 | T2957 | conj | suberic,adipic |
| R1860 | T2961 | T2960 | punct | ", ",suberic |
| R1861 | T2962 | T2960 | cc | and,suberic |
| R1862 | T2963 | T2960 | conj | sebacic,suberic |
| R1863 | T2964 | T2958 | cc | and,acids |
| R1864 | T2965 | T2958 | conj | hexanoylglycine,acids |
| R1865 | T2966 | T2967 | mark | as,compared |
| R1866 | T2967 | T2940 | advcl | compared,developed |
| R1867 | T2968 | T2967 | prep | to,compared |
| R1868 | T2969 | T2970 | nmod | MCAD,controls |
| R1869 | T2970 | T2968 | pobj | controls,to |
| R1870 | T2971 | T2969 | punct | +,MCAD |
| R1871 | T2972 | T2969 | punct | /,MCAD |
| R1872 | T2973 | T2969 | punct | +,MCAD |
| R1873 | T2974 | T2970 | punct | ", ",controls |
| R1874 | T2975 | T2976 | dep | which,showed |
| R1875 | T2976 | T2970 | relcl | showed,controls |
| R1876 | T2977 | T2976 | dobj | trace,showed |
| R1877 | T2978 | T2977 | prep | to,trace |
| R1878 | T2979 | T2980 | det | no,amounts |
| R1879 | T2980 | T2978 | pobj | amounts,to |
| R1880 | T2981 | T2980 | amod | detectable,amounts |
| R1881 | T2982 | T2977 | prep | of,trace |
| R1882 | T2983 | T2984 | det | the,acids |
| R1883 | T2984 | T2982 | pobj | acids,of |
| R1884 | T2985 | T2984 | amod | same,acids |
| R1885 | T2986 | T2984 | amod | organic,acids |
| R1886 | T2987 | T2988 | punct | (,Table |
| R1887 | T2988 | T2940 | parataxis | Table,developed |
| R1888 | T2989 | T2988 | nummod | 1,Table |
| R1889 | T2990 | T2988 | punct | ),Table |
| R1890 | T2991 | T2940 | punct | .,developed |
| R1891 | T2993 | T2994 | amod | Adipic,acid |
| R1892 | T2994 | T2995 | nsubj | acid,is |
| R1893 | T2996 | T2995 | neg | not,is |
| R1894 | T2997 | T2995 | acomp | specific,is |
| R1895 | T2998 | T2997 | prep | to,specific |
| R1896 | T2999 | T3000 | compound | MCAD,deficiency |
| R1897 | T3000 | T2998 | pobj | deficiency,to |
| R1898 | T3001 | T2995 | punct | .,is |
| R1899 | T3003 | T3004 | nsubj | We,evaluated |
| R1900 | T3005 | T3004 | advmod | also,evaluated |
| R1901 | T3006 | T3007 | npadvmod | β,hydroxybutyric |
| R1902 | T3007 | T3009 | amod | hydroxybutyric,concentrations |
| R1903 | T3008 | T3007 | punct | -,hydroxybutyric |
| R1904 | T3009 | T3004 | dobj | concentrations,evaluated |
| R1905 | T3010 | T3007 | cc | and,hydroxybutyric |
| R1906 | T3011 | T3007 | conj | acetoacetic,hydroxybutyric |
| R1907 | T3012 | T3004 | cc | and,evaluated |
| R1908 | T3013 | T3004 | conj | found,evaluated |
| R1909 | T3014 | T3015 | det | no,differences |
| R1910 | T3015 | T3013 | dobj | differences,found |
| R1911 | T3016 | T3015 | amod | significant,differences |
| R1912 | T3017 | T3015 | prep | between,differences |
| R1913 | T3018 | T3019 | compound | MCAD,genotypes |
| R1914 | T3019 | T3017 | pobj | genotypes,between |
| R1915 | T3020 | T3021 | punct | (,shown |
| R1916 | T3021 | T3013 | parataxis | shown,found |
| R1917 | T3022 | T3021 | nsubj | data,shown |
| R1918 | T3023 | T3021 | neg | not,shown |
| R1919 | T3024 | T3021 | punct | ),shown |
| R1920 | T3025 | T3004 | punct | .,evaluated |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3196 | 487-498 | CHEBI:15344 | denotes | acetoacetic |
| T3195 | 466-482 | CHEBI:20067 | denotes | β-hydroxybutyric |
| T3194 | 400-411 | CHEBI:30832 | denotes | Adipic acid |
| T3193 | 375-388 | CHEBI:64709 | denotes | organic acids |
| T3192 | 270-285 | CHEBI:64390 | denotes | hexanoylglycine |
| T3191 | 252-265 | CHEBI:41865 | denotes | sebacic acids |
| T3190 | 260-265 | CHEBI:9300 | denotes | acids |
| T3189 | 239-246 | _FRAGMENT | denotes | suberic |
| T3188 | 260-265 | CHEBI:30832 | denotes | acids |
| T3187 | 231-237 | _FRAGMENT | denotes | adipic |
| T3186 | 175-179 | NCBITaxon:10088 | denotes | mice |
| T3185 | 115-120 | NCBITaxon:9606 | denotes | human |
| T3184 | 68-80 | CHEBI:64709 | denotes | organic acid |
| T3183 | 50-54 | NCBITaxon:10088 | denotes | mice |
| T3182 | 6-18 | CHEBI:64709 | denotes | organic acid |
| T3181 | 0-5 | UBERON:0001088 | denotes | Urine |
| R2066 | T3188 | T3187 | _lexicallyChainedTo | acids,adipic |
| R2067 | T3190 | T3189 | _lexicallyChainedTo | acids,suberic |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T3249 | 564-573 | SO_EXT:genotype_or_entity_with_genotype | denotes | genotypes |
| T3248 | 559-563 | GO_PR_EXT:medium_chain_acyl_CoA_dehydrogenase | denotes | MCAD |
| T3247 | 487-498 | CHEBI:15344 | denotes | acetoacetic |
| T3246 | 466-482 | CHEBI:20067 | denotes | β-hydroxybutyric |
| T3245 | 431-435 | GO_PR_EXT:medium_chain_acyl_CoA_dehydrogenase | denotes | MCAD |
| T3244 | 400-411 | CHEBI:30832 | denotes | Adipic acid |
| T3243 | 375-388 | CHEBI:64709 | denotes | organic acids |
| T3242 | 307-308 | SO_EXT:normal_or_wild_type_or_present | denotes | + |
| T3241 | 305-306 | SO_EXT:normal_or_wild_type_or_present | denotes | + |
| T3240 | 301-305 | GO_PR_EXT:medium_chain_acyl_CoA_dehydrogenase | denotes | MCAD |
| T3239 | 270-285 | CHEBI:64390 | denotes | hexanoylglycine |
| T3238 | 252-265 | CHEBI:41865 | denotes | sebacic acids |
| T3237 | 260-265 | CHEBI:9300 | denotes | acids |
| T3236 | 239-246 | _FRAGMENT | denotes | suberic |
| T3235 | 260-265 | CHEBI:30832 | denotes | acids |
| T3234 | 231-237 | _FRAGMENT | denotes | adipic |
| T3233 | 175-179 | NCBITaxon:10088 | denotes | mice |
| T3232 | 173-174 | SO_EXT:sequence_nullness_or_absence | denotes | − |
| T3231 | 171-172 | SO_EXT:sequence_nullness_or_absence | denotes | − |
| T3230 | 167-171 | GO_PR_EXT:medium_chain_acyl_CoA_dehydrogenase | denotes | MCAD |
| T3229 | 115-120 | NCBITaxon:9606 | denotes | human |
| T3228 | 100-104 | GO_PR_EXT:medium_chain_acyl_CoA_dehydrogenase | denotes | MCAD |
| T3227 | 68-80 | CHEBI:64709 | denotes | organic acid |
| T3226 | 50-54 | NCBITaxon:10088 | denotes | mice |
| T3225 | 48-49 | SO_EXT:sequence_nullness_or_absence | denotes | − |
| T3224 | 46-47 | SO_EXT:sequence_nullness_or_absence | denotes | − |
| T3223 | 42-46 | GO_PR_EXT:medium_chain_acyl_CoA_dehydrogenase | denotes | MCAD |
| T3222 | 6-18 | CHEBI:64709 | denotes | organic acid |
| T3221 | 0-5 | UBERON:0001088 | denotes | Urine |
| R2068 | T3235 | T3234 | _lexicallyChainedTo | acids,adipic |
| R2069 | T3237 | T3236 | _lexicallyChainedTo | acids,suberic |