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PMC:1186732 / 10696-11310 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T1704 1-6 NN denotes Nr2e3
T1705 7-17 NN denotes expression
T1706 18-20 VBZ denotes is
T1707 102-107 VBZ denotes peaks
T1708 21-26 RB denotes first
T1709 27-37 JJ denotes detectable
T1710 38-40 IN denotes by
T1711 41-43 FW denotes in
T1712 44-48 FW denotes situ
T1713 49-62 NN denotes hybridization
T1714 63-69 IN denotes around
T1715 70-79 JJ denotes embryonic
T1716 80-83 NN denotes day
T1717 84-86 CD denotes 18
T1718 87-88 -LRB- denotes (
T1719 88-91 NN denotes E18
T1720 91-92 -RRB- denotes )
T1721 92-93 : denotes ;
T1722 94-96 PRP denotes it
T1723 97-101 RB denotes then
T1724 108-114 IN denotes around
T1725 115-117 NN denotes P6
T1726 118-121 CC denotes and
T1727 122-134 RB denotes subsequently
T1728 135-144 VBZ denotes decreases
T1729 145-147 IN denotes to
T1730 148-153 JJ denotes adult
T1731 154-160 NNS denotes levels
T1732 161-163 IN denotes by
T1733 164-167 NN denotes P21
T1734 168-169 -LRB- denotes (
T1735 181-185 NNS denotes data
T1736 169-180 JJ denotes unpublished
T1737 185-186 -RRB- denotes )
T1738 186-187 . denotes .
T1739 187-354 sentence denotes In accordance with this time course of expression, almost no gene expression changes were found at P0, with progressively more changes at later timepoints (Figure 1).
T1740 188-190 IN denotes In
T1741 278-283 VBN denotes found
T1742 191-201 NN denotes accordance
T1743 202-206 IN denotes with
T1744 207-211 DT denotes this
T1745 217-223 NN denotes course
T1746 212-216 NN denotes time
T1747 224-226 IN denotes of
T1748 227-237 NN denotes expression
T1749 237-239 , denotes ,
T1750 239-245 RB denotes almost
T1751 265-272 NNS denotes changes
T1752 246-248 DT denotes no
T1753 249-253 NN denotes gene
T1754 254-264 NN denotes expression
T1755 273-277 VBD denotes were
T1756 284-286 IN denotes at
T1757 287-289 NN denotes P0
T1758 289-291 , denotes ,
T1759 291-295 IN denotes with
T1760 296-309 RB denotes progressively
T1761 315-322 NNS denotes changes
T1762 310-314 JJR denotes more
T1763 323-325 IN denotes at
T1764 326-331 JJ denotes later
T1765 332-342 NNS denotes timepoints
T1766 343-344 -LRB- denotes (
T1767 344-350 NN denotes Figure
T1768 351-352 CD denotes 1
T1769 352-353 -RRB- denotes )
T1770 353-354 . denotes .
T1771 354-519 sentence denotes One exception to this statement is the gene RIKEN cDNA 4933409K07 (Figure 1, gene G47), which was the only gene shown to be up-regulated at all timepoints examined.
T1772 355-358 CD denotes One
T1773 359-368 NN denotes exception
T1774 387-389 VBZ denotes is
T1775 369-371 IN denotes to
T1776 372-376 DT denotes this
T1777 377-386 NN denotes statement
T1778 390-393 DT denotes the
T1779 394-398 NN denotes gene
T1780 399-404 NN denotes RIKEN
T1781 410-420 NN denotes 4933409K07
T1782 405-409 NN denotes cDNA
T1783 421-422 -LRB- denotes (
T1784 422-428 NN denotes Figure
T1785 429-430 CD denotes 1
T1786 430-432 , denotes ,
T1787 432-436 NN denotes gene
T1788 437-440 NN denotes G47
T1789 440-441 -RRB- denotes )
T1790 441-443 , denotes ,
T1791 443-448 WDT denotes which
T1792 449-452 VBD denotes was
T1793 453-456 DT denotes the
T1794 462-466 NN denotes gene
T1795 457-461 JJ denotes only
T1796 467-472 VBN denotes shown
T1797 473-475 TO denotes to
T1798 482-491 VBN denotes regulated
T1799 476-478 VB denotes be
T1800 479-481 RB denotes up
T1801 481-482 HYPH denotes -
T1802 492-494 IN denotes at
T1803 495-498 DT denotes all
T1804 499-509 NNS denotes timepoints
T1805 510-518 VBN denotes examined
T1806 518-519 . denotes .
T1807 519-614 sentence denotes Additional discussion of this gene and its unusual expression pattern will be presented below.
T1808 520-530 JJ denotes Additional
T1809 531-541 NN denotes discussion
T1810 598-607 VBN denotes presented
T1811 542-544 IN denotes of
T1812 545-549 DT denotes this
T1813 550-554 NN denotes gene
T1814 555-558 CC denotes and
T1815 559-562 PRP$ denotes its
T1816 582-589 NN denotes pattern
T1817 563-570 JJ denotes unusual
T1818 571-581 NN denotes expression
T1819 590-594 MD denotes will
T1820 595-597 VB denotes be
T1821 608-613 RB denotes below
T1822 613-614 . denotes .
R1119 T1704 T1705 compound Nr2e3,expression
R1120 T1705 T1706 nsubj expression,is
R1121 T1706 T1707 ccomp is,peaks
R1122 T1708 T1706 advmod first,is
R1123 T1709 T1706 acomp detectable,is
R1124 T1710 T1706 prep by,is
R1125 T1711 T1712 advmod in,situ
R1126 T1712 T1713 amod situ,hybridization
R1127 T1713 T1710 pobj hybridization,by
R1128 T1714 T1706 prep around,is
R1129 T1715 T1716 amod embryonic,day
R1130 T1716 T1714 pobj day,around
R1131 T1717 T1716 nummod 18,day
R1132 T1718 T1716 punct (,day
R1133 T1719 T1716 appos E18,day
R1134 T1720 T1707 punct ),peaks
R1135 T1721 T1707 punct ;,peaks
R1136 T1722 T1707 nsubj it,peaks
R1137 T1723 T1707 advmod then,peaks
R1138 T1724 T1707 prep around,peaks
R1139 T1725 T1724 pobj P6,around
R1140 T1726 T1707 cc and,peaks
R1141 T1727 T1728 advmod subsequently,decreases
R1142 T1728 T1707 conj decreases,peaks
R1143 T1729 T1728 prep to,decreases
R1144 T1730 T1731 amod adult,levels
R1145 T1731 T1729 pobj levels,to
R1146 T1732 T1728 prep by,decreases
R1147 T1733 T1732 pobj P21,by
R1148 T1734 T1735 punct (,data
R1149 T1735 T1728 meta data,decreases
R1150 T1736 T1735 amod unpublished,data
R1151 T1737 T1735 punct ),data
R1152 T1738 T1707 punct .,peaks
R1153 T1740 T1741 prep In,found
R1154 T1742 T1740 pobj accordance,In
R1155 T1743 T1742 prep with,accordance
R1156 T1744 T1745 det this,course
R1157 T1745 T1743 pobj course,with
R1158 T1746 T1745 compound time,course
R1159 T1747 T1745 prep of,course
R1160 T1748 T1747 pobj expression,of
R1161 T1749 T1741 punct ", ",found
R1162 T1750 T1751 advmod almost,changes
R1163 T1751 T1741 nsubjpass changes,found
R1164 T1752 T1751 det no,changes
R1165 T1753 T1754 compound gene,expression
R1166 T1754 T1751 compound expression,changes
R1167 T1755 T1741 auxpass were,found
R1168 T1756 T1741 prep at,found
R1169 T1757 T1756 pobj P0,at
R1170 T1758 T1741 punct ", ",found
R1171 T1759 T1741 prep with,found
R1172 T1760 T1761 advmod progressively,changes
R1173 T1761 T1759 pobj changes,with
R1174 T1762 T1761 amod more,changes
R1175 T1763 T1761 prep at,changes
R1176 T1764 T1765 amod later,timepoints
R1177 T1765 T1763 pobj timepoints,at
R1178 T1766 T1767 punct (,Figure
R1179 T1767 T1741 parataxis Figure,found
R1180 T1768 T1767 nummod 1,Figure
R1181 T1769 T1767 punct ),Figure
R1182 T1770 T1741 punct .,found
R1183 T1772 T1773 nummod One,exception
R1184 T1773 T1774 nsubj exception,is
R1185 T1775 T1773 prep to,exception
R1186 T1776 T1777 det this,statement
R1187 T1777 T1775 pobj statement,to
R1188 T1778 T1779 det the,gene
R1189 T1779 T1774 attr gene,is
R1190 T1780 T1781 compound RIKEN,4933409K07
R1191 T1781 T1779 appos 4933409K07,gene
R1192 T1782 T1781 compound cDNA,4933409K07
R1193 T1783 T1784 punct (,Figure
R1194 T1784 T1779 parataxis Figure,gene
R1195 T1785 T1784 nummod 1,Figure
R1196 T1786 T1784 punct ", ",Figure
R1197 T1787 T1788 compound gene,G47
R1198 T1788 T1784 appos G47,Figure
R1199 T1789 T1784 punct ),Figure
R1200 T1790 T1779 punct ", ",gene
R1201 T1791 T1792 dep which,was
R1202 T1792 T1779 relcl was,gene
R1203 T1793 T1794 det the,gene
R1204 T1794 T1792 attr gene,was
R1205 T1795 T1794 amod only,gene
R1206 T1796 T1794 acl shown,gene
R1207 T1797 T1798 aux to,regulated
R1208 T1798 T1796 xcomp regulated,shown
R1209 T1799 T1798 auxpass be,regulated
R1210 T1800 T1798 advmod up,regulated
R1211 T1801 T1798 punct -,regulated
R1212 T1802 T1798 prep at,regulated
R1213 T1803 T1804 det all,timepoints
R1214 T1804 T1802 pobj timepoints,at
R1215 T1805 T1804 acl examined,timepoints
R1216 T1806 T1774 punct .,is
R1217 T1808 T1809 amod Additional,discussion
R1218 T1809 T1810 nsubjpass discussion,presented
R1219 T1811 T1809 prep of,discussion
R1220 T1812 T1813 det this,gene
R1221 T1813 T1811 pobj gene,of
R1222 T1814 T1813 cc and,gene
R1223 T1815 T1816 poss its,pattern
R1224 T1816 T1813 conj pattern,gene
R1225 T1817 T1816 amod unusual,pattern
R1226 T1818 T1816 compound expression,pattern
R1227 T1819 T1810 aux will,presented
R1228 T1820 T1810 auxpass be,presented
R1229 T1821 T1810 advmod below,presented
R1230 T1822 T1810 punct .,presented

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1386 1-6 PR_EXT:000011403 denotes Nr2e3
T1387 7-17 GO:0010467 denotes expression
T1388 49-62 GO:0097617 denotes hybridization
T1389 70-79 UBERON:0000922 denotes embryonic
T1390 148-153 UBERON:0007023 denotes adult
T1391 227-237 GO:0010467 denotes expression
T1392 249-253 SO_EXT:0000704 denotes gene
T1393 249-264 GO:0010467 denotes gene expression
T1394 394-398 SO_EXT:0000704 denotes gene
T1395 405-409 SO_EXT:cDNA denotes cDNA
T1396 432-436 SO_EXT:0000704 denotes gene
T1397 462-466 SO_EXT:0000704 denotes gene
T1398 479-491 GO_EXT:positive_regulation denotes up-regulated
T1399 550-554 SO_EXT:0000704 denotes gene
T1400 571-581 GO:0010467 denotes expression

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1327 1-6 PR:000011403 denotes Nr2e3
T1328 7-17 GO:0010467 denotes expression
T1329 49-62 GO:0097617 denotes hybridization
T1330 70-79 UBERON:0000922 denotes embryonic
T1331 148-153 UBERON:0007023 denotes adult
T1332 227-237 GO:0010467 denotes expression
T1333 249-253 SO:0000704 denotes gene
T1334 249-264 GO:0010467 denotes gene expression
T1335 394-398 SO:0000704 denotes gene
T1336 432-436 SO:0000704 denotes gene
T1337 462-466 SO:0000704 denotes gene
T1338 550-554 SO:0000704 denotes gene
T1339 571-581 GO:0010467 denotes expression