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PMC:1181811 / 627-1470 JSONTXT

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Id Subject Object Predicate Lexical cue
T242 0-2 PRP denotes We
T243 3-7 VBD denotes used
T244 8-13 JJ denotes brief
T245 14-20 NN denotes access
T246 13-14 HYPH denotes -
T247 38-45 NN denotes testing
T248 21-31 JJ denotes behavioral
T249 32-37 NN denotes taste
T250 46-48 IN denotes of
T251 49-52 NN denotes BXD
T252 53-55 NN denotes Ty
T253 52-53 HYPH denotes /
T254 86-93 NNS denotes strains
T255 56-67 JJ denotes recombinant
T256 68-74 JJ denotes inbred
T257 75-76 -LRB- denotes (
T258 76-78 JJ denotes RI
T259 78-79 -RRB- denotes )
T260 80-85 NN denotes mouse
T261 94-96 TO denotes to
T262 97-100 VB denotes map
T263 101-104 DT denotes the
T264 130-135 NN denotes locus
T265 105-110 JJ denotes major
T266 111-123 JJ denotes quantitative
T267 124-129 NN denotes trait
T268 136-137 -LRB- denotes (
T269 137-140 NN denotes QTL
T270 140-141 -RRB- denotes )
T271 142-145 IN denotes for
T272 146-151 NN denotes taste
T273 152-163 NN denotes sensitivity
T274 164-166 IN denotes to
T275 167-171 NN denotes QHCl
T276 171-172 . denotes .
T277 172-278 sentence denotes This QTL is restricted to a ~5 Mb interval on chromosome 6 that includes 24 genes encoding T2Rs (Tas2rs).
T278 173-177 DT denotes This
T279 178-181 NN denotes QTL
T280 185-195 VBN denotes restricted
T281 182-184 VBZ denotes is
T282 196-198 IN denotes to
T283 199-200 DT denotes a
T284 207-215 NN denotes interval
T285 201-202 SYM denotes ~
T286 202-203 CD denotes 5
T287 204-206 NN denotes Mb
T288 216-218 IN denotes on
T289 219-229 NN denotes chromosome
T290 230-231 CD denotes 6
T291 232-236 WDT denotes that
T292 237-245 VBZ denotes includes
T293 246-248 CD denotes 24
T294 249-254 NNS denotes genes
T295 255-263 VBG denotes encoding
T296 264-268 NNS denotes T2Rs
T297 269-270 -LRB- denotes (
T298 270-276 NNS denotes Tas2rs
T299 276-277 -RRB- denotes )
T300 277-278 . denotes .
T301 278-529 sentence denotes Tas2rs at this locus display in total 307 coding region single nucleotide polymorphisms (SNPs) between the two BXD/Ty RI parental strains, C57BL/6J (quinine-sensitive) and DBA/2J (quinine insensitive); approximately 50% of these mutations are silent.
T302 279-285 NNS denotes Tas2rs
T303 300-307 VBP denotes display
T304 286-288 IN denotes at
T305 289-293 DT denotes this
T306 294-299 NN denotes locus
T307 518-521 VBP denotes are
T308 308-310 IN denotes in
T309 311-316 JJ denotes total
T310 317-320 CD denotes 307
T311 353-366 NNS denotes polymorphisms
T312 321-327 NN denotes coding
T313 328-334 NN denotes region
T314 335-341 JJ denotes single
T315 342-352 NN denotes nucleotide
T316 367-368 -LRB- denotes (
T317 368-372 NNS denotes SNPs
T318 372-373 -RRB- denotes )
T319 374-381 IN denotes between
T320 382-385 DT denotes the
T321 409-416 NNS denotes strains
T322 386-389 CD denotes two
T323 390-393 NN denotes BXD
T324 394-396 NN denotes Ty
T325 393-394 HYPH denotes /
T326 397-399 JJ denotes RI
T327 400-408 JJ denotes parental
T328 416-418 , denotes ,
T329 418-423 NN denotes C57BL
T330 424-426 NN denotes 6J
T331 423-424 HYPH denotes /
T332 427-428 -LRB- denotes (
T333 436-445 JJ denotes sensitive
T334 428-435 NN denotes quinine
T335 435-436 HYPH denotes -
T336 445-446 -RRB- denotes )
T337 447-450 CC denotes and
T338 451-454 NN denotes DBA
T339 455-457 NN denotes 2J
T340 454-455 HYPH denotes /
T341 458-459 -LRB- denotes (
T342 467-478 JJ denotes insensitive
T343 459-466 NN denotes quinine
T344 478-479 -RRB- denotes )
T345 479-480 : denotes ;
T346 481-494 RB denotes approximately
T347 495-497 CD denotes 50
T348 497-498 NN denotes %
T349 499-501 IN denotes of
T350 502-507 DT denotes these
T351 508-517 NNS denotes mutations
T352 522-528 JJ denotes silent
T353 528-529 . denotes .
T354 529-740 sentence denotes Individual RI lines contain exclusively either C57BL/6J or DBA/2J Tas2r alleles at this locus, and RI lines containing C57BL/6J Tas2r alleles are more sensitive to QHCl than are lines containing DBA/2J alleles.
T355 530-540 JJ denotes Individual
T356 544-549 NNS denotes lines
T357 541-543 JJ denotes RI
T358 550-557 VBP denotes contain
T359 558-569 RB denotes exclusively
T360 570-576 CC denotes either
T361 583-585 NN denotes 6J
T362 577-582 NN denotes C57BL
T363 582-583 HYPH denotes /
T364 602-609 NNS denotes alleles
T365 586-588 CC denotes or
T366 589-592 NN denotes DBA
T367 593-595 NN denotes 2J
T368 592-593 HYPH denotes /
T369 596-601 NN denotes Tas2r
T370 610-612 IN denotes at
T371 613-617 DT denotes this
T372 618-623 NN denotes locus
T373 623-625 , denotes ,
T374 625-628 CC denotes and
T375 629-631 JJ denotes RI
T376 632-637 NNS denotes lines
T377 672-675 VBP denotes are
T378 638-648 VBG denotes containing
T379 649-654 NN denotes C57BL
T380 655-657 NN denotes 6J
T381 654-655 HYPH denotes /
T382 664-671 NNS denotes alleles
T383 658-663 NN denotes Tas2r
T384 676-680 RBR denotes more
T385 681-690 JJ denotes sensitive
T386 691-693 IN denotes to
T387 694-698 NN denotes QHCl
T388 699-703 IN denotes than
T389 704-707 VBP denotes are
T390 708-713 NNS denotes lines
T391 714-724 VBG denotes containing
T392 725-728 NN denotes DBA
T393 729-731 NN denotes 2J
T394 728-729 HYPH denotes /
T395 732-739 NNS denotes alleles
T396 739-740 . denotes .
T397 740-843 sentence denotes Thus, the entire Tas2r cluster comprises a large haplotype that correlates with quinine taster status.
T398 741-745 RB denotes Thus
T399 772-781 VBZ denotes comprises
T400 745-747 , denotes ,
T401 747-750 DT denotes the
T402 764-771 NN denotes cluster
T403 751-757 JJ denotes entire
T404 758-763 NN denotes Tas2r
T405 782-783 DT denotes a
T406 790-799 NN denotes haplotype
T407 784-789 JJ denotes large
T408 800-804 WDT denotes that
T409 805-815 VBZ denotes correlates
T410 816-820 IN denotes with
T411 821-828 NN denotes quinine
T412 829-835 NN denotes taster
T413 836-842 NN denotes status
T414 842-843 . denotes .
R103 T242 T243 nsubj We,used
R104 T244 T245 amod brief,access
R105 T245 T247 nmod access,testing
R107 T247 T243 dobj testing,used
R110 T250 T247 prep of,testing
R111 T251 T252 nmod BXD,Ty
R112 T252 T254 nmod Ty,strains
R114 T254 T250 pobj strains,of
R121 T261 T262 aux to,map
R122 T262 T243 advcl map,used
R123 T263 T264 det the,locus
R124 T264 T262 dobj locus,map
R128 T268 T264 punct (,locus
R129 T269 T264 appos QTL,locus
R130 T270 T262 punct ),map
R131 T271 T262 prep for,map
R132 T272 T273 compound taste,sensitivity
R133 T273 T271 pobj sensitivity,for
R134 T274 T273 prep to,sensitivity
R135 T275 T274 pobj QHCl,to
R136 T276 T243 punct .,used
R137 T278 T279 det This,QTL
R138 T279 T280 nsubjpass QTL,restricted
R139 T281 T280 auxpass is,restricted
R140 T282 T280 prep to,restricted
R141 T283 T284 det a,interval
R142 T284 T282 pobj interval,to
R146 T288 T284 prep on,interval
R147 T289 T288 pobj chromosome,on
R148 T290 T289 nummod 6,chromosome
R149 T291 T292 dep that,includes
R150 T292 T284 relcl includes,interval
R151 T293 T294 nummod 24,genes
R152 T294 T292 dobj genes,includes
R153 T295 T294 acl encoding,genes
R154 T296 T295 dobj T2Rs,encoding
R155 T297 T296 punct (,T2Rs
R156 T298 T296 appos Tas2rs,T2Rs
R157 T299 T280 punct ),restricted
R158 T300 T280 punct .,restricted
R159 T302 T303 nsubj Tas2rs,display
R160 T303 T307 ccomp display,are
R164 T308 T303 prep in,display
R165 T309 T308 amod total,in
R166 T310 T311 nummod 307,polymorphisms
R167 T311 T303 dobj polymorphisms,display
R172 T316 T311 punct (,polymorphisms
R173 T317 T311 appos SNPs,polymorphisms
R174 T318 T311 punct ),polymorphisms
R175 T319 T311 prep between,polymorphisms
R176 T320 T321 det the,strains
R177 T321 T319 pobj strains,between
R180 T324 T321 nmod Ty,strains
R181 T325 T324 punct /,Ty
R184 T328 T321 punct ", ",strains
R185 T329 T330 compound C57BL,6J
R186 T330 T321 conj 6J,strains
R188 T332 T333 punct (,sensitive
R189 T333 T330 parataxis sensitive,6J
R192 T336 T333 punct ),sensitive
R193 T337 T330 cc and,6J
R194 T338 T339 compound DBA,2J
R195 T339 T330 conj 2J,6J
R197 T341 T342 punct (,insensitive
R198 T342 T339 parataxis insensitive,2J
R200 T344 T342 punct ),insensitive
R201 T345 T307 punct ;,are
R202 T346 T347 advmod approximately,50
R203 T347 T348 nummod 50,%
R204 T348 T307 nsubj %,are
R205 T349 T348 prep of,%
R206 T350 T351 det these,mutations
R207 T351 T349 pobj mutations,of
R208 T352 T307 acomp silent,are
R209 T353 T307 punct .,are
R210 T355 T356 amod Individual,lines
R211 T356 T358 nsubj lines,contain
R213 T359 T358 advmod exclusively,contain
R214 T360 T361 preconj either,6J
R215 T361 T364 nmod 6J,alleles
R218 T364 T358 dobj alleles,contain
R221 T367 T361 conj 2J,6J
R222 T368 T367 punct /,2J
R224 T370 T358 prep at,contain
R225 T371 T372 det this,locus
R226 T372 T370 pobj locus,at
R227 T373 T358 punct ", ",contain
R228 T374 T358 cc and,contain
R229 T375 T376 amod RI,lines
R230 T376 T377 nsubj lines,are
R231 T377 T358 conj are,contain
R234 T380 T382 compound 6J,alleles
R235 T381 T380 punct /,6J
R236 T382 T378 dobj alleles,containing
R237 T383 T382 compound Tas2r,alleles
R238 T384 T385 advmod more,sensitive
R239 T385 T377 acomp sensitive,are
R240 T386 T385 prep to,sensitive
R241 T387 T386 pobj QHCl,to
R242 T388 T389 mark than,are
R243 T389 T385 advcl are,sensitive
R244 T390 T389 nsubj lines,are
R245 T391 T390 acl containing,lines
R246 T392 T393 compound DBA,2J
R247 T393 T395 compound 2J,alleles
R249 T395 T391 dobj alleles,containing
R250 T396 T377 punct .,are
R251 T398 T399 advmod Thus,comprises
R252 T400 T399 punct ", ",comprises
R253 T401 T402 det the,cluster
R254 T402 T399 nsubj cluster,comprises
R257 T405 T406 det a,haplotype
R258 T406 T399 dobj haplotype,comprises
R260 T408 T409 dep that,correlates
R261 T409 T406 relcl correlates,haplotype
R262 T410 T409 prep with,correlates
R263 T411 T412 compound quinine,taster
R264 T412 T413 compound taster,status
R265 T413 T410 pobj status,with
R266 T414 T399 punct .,comprises
R106 T246 T245 punct -,access
R108 T248 T247 amod behavioral,testing
R109 T249 T247 compound taste,testing
R113 T253 T252 punct /,Ty
R115 T255 T256 amod recombinant,inbred
R116 T256 T254 amod inbred,strains
R117 T257 T258 punct (,RI
R118 T258 T256 parataxis RI,inbred
R119 T259 T258 punct ),RI
R120 T260 T254 compound mouse,strains
R125 T265 T264 amod major,locus
R126 T266 T264 amod quantitative,locus
R127 T267 T264 compound trait,locus
R143 T285 T286 punct ~,5
R144 T286 T287 nummod 5,Mb
R145 T287 T284 compound Mb,interval
R161 T304 T302 prep at,Tas2rs
R162 T305 T306 det this,locus
R163 T306 T304 pobj locus,at
R168 T312 T311 nmod coding,polymorphisms
R169 T313 T311 nmod region,polymorphisms
R170 T314 T311 amod single,polymorphisms
R171 T315 T311 compound nucleotide,polymorphisms
R178 T322 T321 nummod two,strains
R179 T323 T324 nmod BXD,Ty
R182 T326 T321 amod RI,strains
R183 T327 T321 amod parental,strains
R187 T331 T330 punct /,6J
R190 T334 T333 npadvmod quinine,sensitive
R191 T335 T333 punct -,sensitive
R196 T340 T339 punct /,2J
R199 T343 T342 npadvmod quinine,insensitive
R212 T357 T356 amod RI,lines
R216 T362 T361 nmod C57BL,6J
R217 T363 T361 punct /,6J
R219 T365 T361 cc or,6J
R220 T366 T367 compound DBA,2J
R223 T369 T364 compound Tas2r,alleles
R232 T378 T376 acl containing,lines
R233 T379 T380 compound C57BL,6J
R248 T394 T393 punct /,2J
R255 T403 T402 amod entire,cluster
R256 T404 T402 compound Tas2r,cluster
R259 T407 T406 amod large,haplotype

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T80 21-31 GO_PATO_EXT:biological_behavior denotes behavioral
T81 32-37 GO:0050909 denotes taste
T82 56-67 GO_SO_EXT:sequence_rearrangement_process denotes recombinant
T83 80-85 NCBITaxon:10088 denotes mouse
T84 111-135 SO_EXT:0000771 denotes quantitative trait locus
T85 137-140 SO_EXT:0000771 denotes QTL
T86 146-151 GO:0050909 denotes taste
T87 178-181 SO_EXT:0000771 denotes QTL
T88 205-206 CHEBI_SO_EXT:base denotes b
T89 207-229 GO_SO_EXT:chromosomal_part_or_position_or_region_or_site denotes interval on chromosome
T90 249-254 SO_EXT:0000704 denotes genes
T91 255-263 SO_EXT:sequence_coding_function denotes encoding
T92 264-268 PR_EXT:000036337 denotes T2Rs
T93 270-276 PR_EXT:000036337 denotes Tas2rs
T94 279-285 PR_EXT:000036337 denotes Tas2rs
T95 321-334 SO_EXT:coding_sequence denotes coding region
T96 335-366 SO_EXT:0000694 denotes single nucleotide polymorphisms
T97 342-352 CHEBI_SO_EXT:nucleotide denotes nucleotide
T98 368-372 SO_EXT:0000694 denotes SNPs
T99 428-435 CHEBI:15854 denotes quinine
T100 459-466 CHEBI:15854 denotes quinine
T101 508-517 SO_EXT:sequence_alteration_entity_or_process denotes mutations
T102 596-601 PR_EXT:000036337 denotes Tas2r
T103 602-609 SO_EXT:0001023 denotes alleles
T104 658-663 PR_EXT:000036337 denotes Tas2r
T105 664-671 SO_EXT:0001023 denotes alleles
T106 732-739 SO_EXT:0001023 denotes alleles
T107 758-763 PR_EXT:000036337 denotes Tas2r
T108 790-799 SO_EXT:0001024 denotes haplotype
T109 821-828 CHEBI:15854 denotes quinine
T110 829-835 GO_EXT:taster denotes taster

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T21 32-37 GO:0050909 denotes taste
T22 80-85 NCBITaxon:10088 denotes mouse
T23 111-135 SO:0000771 denotes quantitative trait locus
T24 137-140 SO:0000771 denotes QTL
T25 146-151 GO:0050909 denotes taste
T26 178-181 SO:0000771 denotes QTL
T27 249-254 SO:0000704 denotes genes
T28 264-268 PR:000036337 denotes T2Rs
T29 270-276 PR:000036337 denotes Tas2rs
T30 279-285 PR:000036337 denotes Tas2rs
T31 335-366 SO:0000694 denotes single nucleotide polymorphisms
T32 368-372 SO:0000694 denotes SNPs
T33 428-435 CHEBI:15854 denotes quinine
T34 459-466 CHEBI:15854 denotes quinine
T35 596-601 PR:000036337 denotes Tas2r
T36 602-609 SO:0001023 denotes alleles
T37 658-663 PR:000036337 denotes Tas2r
T38 664-671 SO:0001023 denotes alleles
T39 732-739 SO:0001023 denotes alleles
T40 758-763 PR:000036337 denotes Tas2r
T41 790-799 SO:0001024 denotes haplotype
T42 821-828 CHEBI:15854 denotes quinine