PMC:1134658 / 9471-9611 JSONTXT

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    pmc-enju-pas

    {"project":"pmc-enju-pas","denotations":[{"id":"T5635","span":{"begin":0,"end":7},"obj":"NN"},{"id":"T5636","span":{"begin":8,"end":12},"obj":"NN"},{"id":"T5637","span":{"begin":13,"end":21},"obj":"NN"},{"id":"T5638","span":{"begin":22,"end":30},"obj":"VB"},{"id":"T5639","span":{"begin":31,"end":35},"obj":"IN"},{"id":"T5640","span":{"begin":36,"end":39},"obj":"DT"},{"id":"T5641","span":{"begin":40,"end":53},"obj":"JJ"},{"id":"T5642","span":{"begin":54,"end":66},"obj":"NN"},{"id":"T5643","span":{"begin":67,"end":69},"obj":"IN"},{"id":"T5644","span":{"begin":70,"end":73},"obj":"NN"},{"id":"T5645","span":{"begin":74,"end":78},"obj":"NN"},{"id":"T5646","span":{"begin":79,"end":83},"obj":"RB"},{"id":"T5647","span":{"begin":84,"end":87},"obj":"VB"},{"id":"T5648","span":{"begin":88,"end":98},"obj":"VB"},{"id":"T5649","span":{"begin":99,"end":103},"obj":"IN"},{"id":"T5650","span":{"begin":104,"end":116},"obj":"NN"},{"id":"T5651","span":{"begin":117,"end":119},"obj":"IN"},{"id":"T5652","span":{"begin":120,"end":123},"obj":"NN"},{"id":"T5653","span":{"begin":124,"end":131},"obj":"NN"},{"id":"T5654","span":{"begin":132,"end":134},"obj":"RB"},{"id":"T5655","span":{"begin":135,"end":139},"obj":"RB"}],"relations":[{"id":"R4421","pred":"arg1Of","subj":"T5637","obj":"T5635"},{"id":"R4422","pred":"arg1Of","subj":"T5637","obj":"T5636"},{"id":"R4423","pred":"arg1Of","subj":"T5637","obj":"T5638"},{"id":"R4424","pred":"arg1Of","subj":"T5642","obj":"T5640"},{"id":"R4425","pred":"arg1Of","subj":"T5642","obj":"T5641"},{"id":"R4426","pred":"arg1Of","subj":"T5642","obj":"T5643"},{"id":"R4427","pred":"arg1Of","subj":"T5642","obj":"T5647"},{"id":"R4428","pred":"arg2Of","subj":"T5642","obj":"T5648"},{"id":"R4429","pred":"arg2Of","subj":"T5645","obj":"T5643"},{"id":"R4430","pred":"arg1Of","subj":"T5645","obj":"T5644"},{"id":"R4431","pred":"arg2Of","subj":"T5648","obj":"T5638"},{"id":"R4432","pred":"arg1Of","subj":"T5648","obj":"T5639"},{"id":"R4433","pred":"arg1Of","subj":"T5648","obj":"T5646"},{"id":"R4434","pred":"arg2Of","subj":"T5648","obj":"T5647"},{"id":"R4435","pred":"arg1Of","subj":"T5648","obj":"T5649"},{"id":"R4436","pred":"arg1Of","subj":"T5648","obj":"T5655"},{"id":"R4437","pred":"arg2Of","subj":"T5650","obj":"T5649"},{"id":"R4438","pred":"arg1Of","subj":"T5650","obj":"T5651"},{"id":"R4439","pred":"arg2Of","subj":"T5653","obj":"T5651"},{"id":"R4440","pred":"arg1Of","subj":"T5653","obj":"T5652"},{"id":"R4441","pred":"arg1Of","subj":"T5655","obj":"T5654"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"Western blot analysis revealed that the BMP-6-induced upregulation of Id1 mRNA also was correlated with upregulation of Id1 protein as well."}

    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T6032","span":{"begin":0,"end":7},"obj":"JJ"},{"id":"T6033","span":{"begin":8,"end":12},"obj":"NN"},{"id":"T6034","span":{"begin":13,"end":21},"obj":"NN"},{"id":"T6035","span":{"begin":22,"end":30},"obj":"VBD"},{"id":"T6036","span":{"begin":31,"end":35},"obj":"IN"},{"id":"T6037","span":{"begin":36,"end":39},"obj":"DT"},{"id":"T6038","span":{"begin":40,"end":53},"obj":"JJ"},{"id":"T6039","span":{"begin":54,"end":66},"obj":"NN"},{"id":"T6040","span":{"begin":67,"end":69},"obj":"IN"},{"id":"T6041","span":{"begin":70,"end":73},"obj":"NNP"},{"id":"T6042","span":{"begin":74,"end":78},"obj":"NNP"},{"id":"T6043","span":{"begin":79,"end":83},"obj":"RB"},{"id":"T6044","span":{"begin":84,"end":87},"obj":"VBD"},{"id":"T6045","span":{"begin":88,"end":98},"obj":"VBN"},{"id":"T6046","span":{"begin":99,"end":103},"obj":"IN"},{"id":"T6047","span":{"begin":104,"end":116},"obj":"NN"},{"id":"T6048","span":{"begin":117,"end":119},"obj":"IN"},{"id":"T6049","span":{"begin":120,"end":123},"obj":"JJ"},{"id":"T6050","span":{"begin":124,"end":131},"obj":"NN"},{"id":"T6051","span":{"begin":132,"end":134},"obj":"RB"},{"id":"T6052","span":{"begin":135,"end":139},"obj":"RB"},{"id":"T6053","span":{"begin":139,"end":140},"obj":"."}],"relations":[{"id":"R4751","pred":"amod","subj":"T6032","obj":"T6034"},{"id":"R4752","pred":"compound","subj":"T6033","obj":"T6034"},{"id":"R4753","pred":"nsubj","subj":"T6034","obj":"T6035"},{"id":"R4754","pred":"ROOT","subj":"T6035","obj":"T6035"},{"id":"R4755","pred":"mark","subj":"T6036","obj":"T6045"},{"id":"R4756","pred":"det","subj":"T6037","obj":"T6039"},{"id":"R4757","pred":"amod","subj":"T6038","obj":"T6039"},{"id":"R4758","pred":"nsubjpass","subj":"T6039","obj":"T6045"},{"id":"R4759","pred":"prep","subj":"T6040","obj":"T6039"},{"id":"R4760","pred":"compound","subj":"T6041","obj":"T6042"},{"id":"R4761","pred":"pobj","subj":"T6042","obj":"T6040"},{"id":"R4762","pred":"advmod","subj":"T6043","obj":"T6045"},{"id":"R4763","pred":"auxpass","subj":"T6044","obj":"T6045"},{"id":"R4764","pred":"ccomp","subj":"T6045","obj":"T6035"},{"id":"R4765","pred":"prep","subj":"T6046","obj":"T6045"},{"id":"R4766","pred":"pobj","subj":"T6047","obj":"T6046"},{"id":"R4767","pred":"prep","subj":"T6048","obj":"T6047"},{"id":"R4768","pred":"amod","subj":"T6049","obj":"T6050"},{"id":"R4769","pred":"pobj","subj":"T6050","obj":"T6048"},{"id":"R4770","pred":"advmod","subj":"T6051","obj":"T6052"},{"id":"R4771","pred":"advmod","subj":"T6052","obj":"T6045"},{"id":"R4772","pred":"punct","subj":"T6053","obj":"T6035"}],"text":"Western blot analysis revealed that the BMP-6-induced upregulation of Id1 mRNA also was correlated with upregulation of Id1 protein as well."}

    sentences

    {"project":"sentences","denotations":[{"id":"T5451","span":{"begin":0,"end":140},"obj":"Sentence"},{"id":"T79","span":{"begin":0,"end":140},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Western blot analysis revealed that the BMP-6-induced upregulation of Id1 mRNA also was correlated with upregulation of Id1 protein as well."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T6357","span":{"begin":40,"end":45},"obj":"Protein"},{"id":"T6358","span":{"begin":46,"end":53},"obj":"Positive_regulation"},{"id":"T6359","span":{"begin":54,"end":66},"obj":"Positive_regulation"},{"id":"T6360","span":{"begin":70,"end":73},"obj":"Protein"},{"id":"T6361","span":{"begin":88,"end":98},"obj":"Positive_regulation"},{"id":"T6362","span":{"begin":104,"end":116},"obj":"Positive_regulation"},{"id":"T6363","span":{"begin":120,"end":123},"obj":"Protein"}],"relations":[{"id":"R5021","pred":"causeOf","subj":"T6357","obj":"T6358"},{"id":"R5022","pred":"themeOf","subj":"T6359","obj":"T6358"},{"id":"R5023","pred":"causeOf","subj":"T6359","obj":"T6361"},{"id":"R5024","pred":"themeOf","subj":"T6360","obj":"T6359"},{"id":"R5025","pred":"themeOf","subj":"T6362","obj":"T6361"},{"id":"R5026","pred":"themeOf","subj":"T6363","obj":"T6362"}],"text":"Western blot analysis revealed that the BMP-6-induced upregulation of Id1 mRNA also was correlated with upregulation of Id1 protein as well."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T6205","span":{"begin":54,"end":66},"obj":"Positive_regulation"},{"id":"T6206","span":{"begin":70,"end":78},"obj":"Protein"},{"id":"T6207","span":{"begin":104,"end":116},"obj":"Positive_regulation"},{"id":"T6208","span":{"begin":120,"end":131},"obj":"Protein"}],"relations":[{"id":"R4906","pred":"themeOf","subj":"T6206","obj":"T6205"},{"id":"R4907","pred":"themeOf","subj":"T6208","obj":"T6207"}],"text":"Western blot analysis revealed that the BMP-6-induced upregulation of Id1 mRNA also was correlated with upregulation of Id1 protein as well."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T5419","span":{"begin":40,"end":45},"obj":"Protein"},{"id":"T5420","span":{"begin":46,"end":53},"obj":"Positive_regulation"},{"id":"T5421","span":{"begin":54,"end":66},"obj":"Positive_regulation"},{"id":"T5422","span":{"begin":70,"end":73},"obj":"Protein"},{"id":"T5423","span":{"begin":88,"end":98},"obj":"Positive_regulation"},{"id":"T5424","span":{"begin":104,"end":116},"obj":"Positive_regulation"},{"id":"T5425","span":{"begin":120,"end":123},"obj":"Protein"}],"relations":[{"id":"R4223","pred":"causeOf","subj":"T5419","obj":"T5420"},{"id":"R4224","pred":"themeOf","subj":"T5421","obj":"T5420"},{"id":"R4225","pred":"causeOf","subj":"T5421","obj":"T5423"},{"id":"R4226","pred":"themeOf","subj":"T5422","obj":"T5421"},{"id":"R4227","pred":"themeOf","subj":"T5424","obj":"T5423"},{"id":"R4228","pred":"themeOf","subj":"T5425","obj":"T5424"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Western blot analysis revealed that the BMP-6-induced upregulation of Id1 mRNA also was correlated with upregulation of Id1 protein as well."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T5812","span":{"begin":40,"end":43},"obj":"P12643"},{"id":"T5813","span":{"begin":40,"end":43},"obj":"P12644"},{"id":"T5814","span":{"begin":40,"end":43},"obj":"P18075"},{"id":"T5815","span":{"begin":40,"end":43},"obj":"P22004"},{"id":"T5816","span":{"begin":40,"end":45},"obj":"P22004"},{"id":"T5817","span":{"begin":70,"end":73},"obj":"P41134"},{"id":"T5818","span":{"begin":120,"end":123},"obj":"P41134"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Western blot analysis revealed that the BMP-6-induced upregulation of Id1 mRNA also was correlated with upregulation of Id1 protein as well."}

    test2

    {"project":"test2","denotations":[{"id":"T5368","span":{"begin":40,"end":45},"obj":"Protein"},{"id":"T5369","span":{"begin":46,"end":53},"obj":"Positive_regulation"},{"id":"T5370","span":{"begin":54,"end":66},"obj":"Positive_regulation"},{"id":"T5371","span":{"begin":70,"end":73},"obj":"Protein"},{"id":"T5372","span":{"begin":104,"end":116},"obj":"Positive_regulation"},{"id":"T5373","span":{"begin":120,"end":123},"obj":"Protein"}],"relations":[{"id":"R4182","pred":"causeOf","subj":"T5368","obj":"T5369"},{"id":"R4183","pred":"themeOf","subj":"T5370","obj":"T5369"},{"id":"R4184","pred":"themeOf","subj":"T5371","obj":"T5370"},{"id":"R4185","pred":"themeOf","subj":"T5373","obj":"T5372"}],"attributes":[{"id":"M55","pred":"Negation","subj":"T5368","obj":"true"}],"text":"Western blot analysis revealed that the BMP-6-induced upregulation of Id1 mRNA also was correlated with upregulation of Id1 protein as well."}

    tees-test

    {"project":"tees-test","denotations":[{"id":"T1096","span":{"begin":40,"end":45},"obj":"D055418"},{"id":"T1097","span":{"begin":40,"end":45},"obj":"D055418"},{"id":"T1098","span":{"begin":40,"end":45},"obj":"Q04906"},{"id":"T1099","span":{"begin":40,"end":45},"obj":"PR:000000167"},{"id":"T1100","span":{"begin":40,"end":45},"obj":"P20722"},{"id":"T1101","span":{"begin":40,"end":45},"obj":"PR:Q04906"},{"id":"T1102","span":{"begin":40,"end":45},"obj":"P22004"},{"id":"T1103","span":{"begin":40,"end":45},"obj":"PR:P22004"},{"id":"T1104","span":{"begin":40,"end":45},"obj":"PR:P20722"},{"id":"T1105","span":{"begin":70,"end":73},"obj":"PR:P41134"},{"id":"T1106","span":{"begin":70,"end":73},"obj":"PR:P20067"},{"id":"T1107","span":{"begin":70,"end":73},"obj":"PR:P41135"},{"id":"T1108","span":{"begin":70,"end":73},"obj":"PR:000000039"},{"id":"T1109","span":{"begin":74,"end":78},"obj":"D012333"},{"id":"T1110","span":{"begin":74,"end":78},"obj":"CHEBI:33699"},{"id":"T1111","span":{"begin":74,"end":78},"obj":"SO:0000234"},{"id":"T1112","span":{"begin":120,"end":123},"obj":"PR:P41134"},{"id":"T1113","span":{"begin":120,"end":123},"obj":"PR:P20067"},{"id":"T1114","span":{"begin":120,"end":123},"obj":"PR:P41135"},{"id":"T1115","span":{"begin":120,"end":123},"obj":"PR:000000039"},{"id":"T1116","span":{"begin":124,"end":131},"obj":"CHEBI:36080"},{"id":"T1117","span":{"begin":124,"end":131},"obj":"CHEBI:11122"},{"id":"T1118","span":{"begin":124,"end":131},"obj":"PR:000000001"},{"id":"T1119","span":{"begin":124,"end":131},"obj":"SO:0000104"},{"id":"T1120","span":{"begin":124,"end":131},"obj":"GO:0003675"}],"text":"Western blot analysis revealed that the BMP-6-induced upregulation of Id1 mRNA also was correlated with upregulation of Id1 protein as well."}