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PMC:1134658 / 9471-9611 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5635 0-7 NN denotes Western
T5636 8-12 NN denotes blot
T5637 13-21 NN denotes analysis
T5638 22-30 VB denotes revealed
T5639 31-35 IN denotes that
T5640 36-39 DT denotes the
T5641 40-53 JJ denotes BMP-6-induced
T5642 54-66 NN denotes upregulation
T5643 67-69 IN denotes of
T5644 70-73 NN denotes Id1
T5645 74-78 NN denotes mRNA
T5646 79-83 RB denotes also
T5647 84-87 VB denotes was
T5648 88-98 VB denotes correlated
T5649 99-103 IN denotes with
T5650 104-116 NN denotes upregulation
T5651 117-119 IN denotes of
T5652 120-123 NN denotes Id1
T5653 124-131 NN denotes protein
T5654 132-134 RB denotes as
T5655 135-139 RB denotes well
R4421 T5637 T5635 arg1Of analysis,Western
R4422 T5637 T5636 arg1Of analysis,blot
R4423 T5637 T5638 arg1Of analysis,revealed
R4424 T5642 T5640 arg1Of upregulation,the
R4425 T5642 T5641 arg1Of upregulation,BMP-6-induced
R4426 T5642 T5643 arg1Of upregulation,of
R4427 T5642 T5647 arg1Of upregulation,was
R4428 T5642 T5648 arg2Of upregulation,correlated
R4429 T5645 T5643 arg2Of mRNA,of
R4430 T5645 T5644 arg1Of mRNA,Id1
R4431 T5648 T5638 arg2Of correlated,revealed
R4432 T5648 T5639 arg1Of correlated,that
R4433 T5648 T5646 arg1Of correlated,also
R4434 T5648 T5647 arg2Of correlated,was
R4435 T5648 T5649 arg1Of correlated,with
R4436 T5648 T5655 arg1Of correlated,well
R4437 T5650 T5649 arg2Of upregulation,with
R4438 T5650 T5651 arg1Of upregulation,of
R4439 T5653 T5651 arg2Of protein,of
R4440 T5653 T5652 arg1Of protein,Id1
R4441 T5655 T5654 arg1Of well,as

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6032 0-7 JJ denotes Western
T6033 8-12 NN denotes blot
T6034 13-21 NN denotes analysis
T6035 22-30 VBD denotes revealed
T6036 31-35 IN denotes that
T6037 36-39 DT denotes the
T6038 40-53 JJ denotes BMP-6-induced
T6039 54-66 NN denotes upregulation
T6040 67-69 IN denotes of
T6041 70-73 NNP denotes Id1
T6042 74-78 NNP denotes mRNA
T6043 79-83 RB denotes also
T6044 84-87 VBD denotes was
T6045 88-98 VBN denotes correlated
T6046 99-103 IN denotes with
T6047 104-116 NN denotes upregulation
T6048 117-119 IN denotes of
T6049 120-123 JJ denotes Id1
T6050 124-131 NN denotes protein
T6051 132-134 RB denotes as
T6052 135-139 RB denotes well
T6053 139-140 . denotes .
R4751 T6032 T6034 amod Western,analysis
R4752 T6033 T6034 compound blot,analysis
R4753 T6034 T6035 nsubj analysis,revealed
R4754 T6035 T6035 ROOT revealed,revealed
R4755 T6036 T6045 mark that,correlated
R4756 T6037 T6039 det the,upregulation
R4757 T6038 T6039 amod BMP-6-induced,upregulation
R4758 T6039 T6045 nsubjpass upregulation,correlated
R4759 T6040 T6039 prep of,upregulation
R4760 T6041 T6042 compound Id1,mRNA
R4761 T6042 T6040 pobj mRNA,of
R4762 T6043 T6045 advmod also,correlated
R4763 T6044 T6045 auxpass was,correlated
R4764 T6045 T6035 ccomp correlated,revealed
R4765 T6046 T6045 prep with,correlated
R4766 T6047 T6046 pobj upregulation,with
R4767 T6048 T6047 prep of,upregulation
R4768 T6049 T6050 amod Id1,protein
R4769 T6050 T6048 pobj protein,of
R4770 T6051 T6052 advmod as,well
R4771 T6052 T6045 advmod well,correlated
R4772 T6053 T6035 punct .,revealed

sentences

Id Subject Object Predicate Lexical cue
T5451 0-140 Sentence denotes Western blot analysis revealed that the BMP-6-induced upregulation of Id1 mRNA also was correlated with upregulation of Id1 protein as well.
T79 0-140 Sentence denotes Western blot analysis revealed that the BMP-6-induced upregulation of Id1 mRNA also was correlated with upregulation of Id1 protein as well.

events-check-again

Id Subject Object Predicate Lexical cue
T6357 40-45 Protein denotes BMP-6
T6358 46-53 Positive_regulation denotes induced
T6359 54-66 Positive_regulation denotes upregulation
T6360 70-73 Protein denotes Id1
T6361 88-98 Positive_regulation denotes correlated
T6362 104-116 Positive_regulation denotes upregulation
T6363 120-123 Protein denotes Id1
R5021 T6357 T6358 causeOf BMP-6,induced
R5022 T6359 T6358 themeOf upregulation,induced
R5023 T6359 T6361 causeOf upregulation,correlated
R5024 T6360 T6359 themeOf Id1,upregulation
R5025 T6362 T6361 themeOf upregulation,correlated
R5026 T6363 T6362 themeOf Id1,upregulation

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T6205 54-66 Positive_regulation denotes upregulation
T6206 70-78 Protein denotes Id1 mRNA
T6207 104-116 Positive_regulation denotes upregulation
T6208 120-131 Protein denotes Id1 protein
R4906 T6206 T6205 themeOf Id1 mRNA,upregulation
R4907 T6208 T6207 themeOf Id1 protein,upregulation

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T5419 40-45 Protein denotes BMP-6
T5420 46-53 Positive_regulation denotes induced
T5421 54-66 Positive_regulation denotes upregulation
T5422 70-73 Protein denotes Id1
T5423 88-98 Positive_regulation denotes correlated
T5424 104-116 Positive_regulation denotes upregulation
T5425 120-123 Protein denotes Id1
R4223 T5419 T5420 causeOf BMP-6,induced
R4224 T5421 T5420 themeOf upregulation,induced
R4225 T5421 T5423 causeOf upregulation,correlated
R4226 T5422 T5421 themeOf Id1,upregulation
R4227 T5424 T5423 themeOf upregulation,correlated
R4228 T5425 T5424 themeOf Id1,upregulation

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T5812 40-43 P12643 denotes BMP
T5813 40-43 P12644 denotes BMP
T5814 40-43 P18075 denotes BMP
T5815 40-43 P22004 denotes BMP
T5816 40-45 P22004 denotes BMP-6
T5817 70-73 P41134 denotes Id1
T5818 120-123 P41134 denotes Id1

test2

Id Subject Object Predicate Lexical cue Negation
T5368 40-45 Protein denotes BMP-6 true
T5369 46-53 Positive_regulation denotes induced
T5370 54-66 Positive_regulation denotes upregulation
T5371 70-73 Protein denotes Id1
T5372 104-116 Positive_regulation denotes upregulation
T5373 120-123 Protein denotes Id1
R4182 T5368 T5369 causeOf BMP-6,induced
R4183 T5370 T5369 themeOf upregulation,induced
R4184 T5371 T5370 themeOf Id1,upregulation
R4185 T5373 T5372 themeOf Id1,upregulation

tees-test

Id Subject Object Predicate Lexical cue
T1096 40-45 D055418 denotes BMP-6
T1097 40-45 D055418 denotes BMP-6
T1098 40-45 Q04906 denotes BMP-6
T1099 40-45 PR:000000167 denotes BMP-6
T1100 40-45 P20722 denotes BMP-6
T1101 40-45 PR:Q04906 denotes BMP-6
T1102 40-45 P22004 denotes BMP-6
T1103 40-45 PR:P22004 denotes BMP-6
T1104 40-45 PR:P20722 denotes BMP-6
T1105 70-73 PR:P41134 denotes Id1
T1106 70-73 PR:P20067 denotes Id1
T1107 70-73 PR:P41135 denotes Id1
T1108 70-73 PR:000000039 denotes Id1
T1109 74-78 D012333 denotes mRNA
T1110 74-78 CHEBI:33699 denotes mRNA
T1111 74-78 SO:0000234 denotes mRNA
T1112 120-123 PR:P41134 denotes Id1
T1113 120-123 PR:P20067 denotes Id1
T1114 120-123 PR:P41135 denotes Id1
T1115 120-123 PR:000000039 denotes Id1
T1116 124-131 CHEBI:36080 denotes protein
T1117 124-131 CHEBI:11122 denotes protein
T1118 124-131 PR:000000001 denotes protein
T1119 124-131 SO:0000104 denotes protein
T1120 124-131 GO:0003675 denotes protein