PMC:1134658 / 570-702 JSONTXT

Annnotations TAB JSON ListView MergeView

    pmc-enju-pas

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    bionlp-st-ge-2016-spacy-parsed

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    GO-BP

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    events-check-again

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    bionlp-st-ge-2016-reference-tees

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    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T111","span":{"begin":12,"end":19},"obj":"Positive_regulation"},{"id":"T112","span":{"begin":12,"end":19},"obj":"Positive_regulation"},{"id":"T113","span":{"begin":12,"end":19},"obj":"Positive_regulation"},{"id":"T114","span":{"begin":20,"end":35},"obj":"Phosphorylation"},{"id":"T115","span":{"begin":20,"end":35},"obj":"Phosphorylation"},{"id":"T116","span":{"begin":20,"end":35},"obj":"Phosphorylation"},{"id":"T117","span":{"begin":39,"end":44},"obj":"Protein"},{"id":"T118","span":{"begin":45,"end":46},"obj":"Protein"},{"id":"T119","span":{"begin":47,"end":48},"obj":"Protein"},{"id":"T120","span":{"begin":63,"end":67},"obj":"Protein"},{"id":"T121","span":{"begin":68,"end":83},"obj":"Phosphorylation"},{"id":"T122","span":{"begin":88,"end":96},"obj":"Positive_regulation"},{"id":"T123","span":{"begin":88,"end":96},"obj":"Positive_regulation"},{"id":"T124","span":{"begin":100,"end":112},"obj":"Positive_regulation"},{"id":"T125","span":{"begin":100,"end":112},"obj":"Positive_regulation"},{"id":"T126","span":{"begin":116,"end":119},"obj":"Protein"},{"id":"T127","span":{"begin":129,"end":132},"obj":"Protein"}],"relations":[{"id":"R645","pred":"themeOf","subj":"T114","obj":"T113"},{"id":"R646","pred":"themeOf","subj":"T115","obj":"T112"},{"id":"R647","pred":"themeOf","subj":"T116","obj":"T111"},{"id":"R648","pred":"themeOf","subj":"T117","obj":"T114"},{"id":"R649","pred":"themeOf","subj":"T118","obj":"T115"},{"id":"R650","pred":"themeOf","subj":"T119","obj":"T116"},{"id":"R651","pred":"themeOf","subj":"T120","obj":"T121"},{"id":"R652","pred":"causeOf","subj":"T121","obj":"T122"},{"id":"R653","pred":"causeOf","subj":"T121","obj":"T123"},{"id":"R656","pred":"themeOf","subj":"T124","obj":"T122"},{"id":"R657","pred":"themeOf","subj":"T125","obj":"T123"},{"id":"R658","pred":"themeOf","subj":"T126","obj":"T124"},{"id":"R659","pred":"themeOf","subj":"T127","obj":"T125"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"P-6 rapidly induced phosphorylation of Smad1/5/8. Furthermore, Smad-phosphorylation was followed by upregulation of Id1 mRNA and Id1"}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T450","span":{"begin":39,"end":44},"obj":"Q15797"},{"id":"T451","span":{"begin":116,"end":119},"obj":"P41134"},{"id":"T452","span":{"begin":129,"end":132},"obj":"P41134"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"P-6 rapidly induced phosphorylation of Smad1/5/8. Furthermore, Smad-phosphorylation was followed by upregulation of Id1 mRNA and Id1"}

    test2

    {"project":"test2","denotations":[{"id":"T67","span":{"begin":12,"end":19},"obj":"Positive_regulation"},{"id":"T68","span":{"begin":20,"end":35},"obj":"Phosphorylation"},{"id":"T69","span":{"begin":39,"end":44},"obj":"Protein"},{"id":"T70","span":{"begin":45,"end":46},"obj":"Protein"},{"id":"T71","span":{"begin":47,"end":48},"obj":"Protein"},{"id":"T72","span":{"begin":63,"end":67},"obj":"Protein"},{"id":"T73","span":{"begin":68,"end":83},"obj":"Phosphorylation"},{"id":"T74","span":{"begin":88,"end":96},"obj":"Positive_regulation"},{"id":"T75","span":{"begin":100,"end":112},"obj":"Positive_regulation"},{"id":"T76","span":{"begin":116,"end":119},"obj":"Protein"},{"id":"T77","span":{"begin":129,"end":132},"obj":"Protein"}],"relations":[{"id":"R45","pred":"themeOf","subj":"T68","obj":"T67"},{"id":"R46","pred":"themeOf","subj":"T69","obj":"T68"},{"id":"R47","pred":"themeOf","subj":"T70","obj":"T68"},{"id":"R48","pred":"themeOf","subj":"T71","obj":"T68"},{"id":"R49","pred":"themeOf","subj":"T72","obj":"T73"},{"id":"R50","pred":"causeOf","subj":"T73","obj":"T74"},{"id":"R51","pred":"themeOf","subj":"T75","obj":"T74"},{"id":"R52","pred":"themeOf","subj":"T76","obj":"T75"},{"id":"R53","pred":"themeOf","subj":"T77","obj":"T75"}],"attributes":[{"id":"M4","pred":"Negation","subj":"T72","obj":"true"},{"id":"M3","pred":"Negation","subj":"T71","obj":"true"}],"text":"P-6 rapidly induced phosphorylation of Smad1/5/8. Furthermore, Smad-phosphorylation was followed by upregulation of Id1 mRNA and Id1"}

    tees-test

    {"project":"tees-test","denotations":[{"id":"T56","span":{"begin":20,"end":35},"obj":"GO:0016310"},{"id":"T57","span":{"begin":39,"end":44},"obj":"PR:Q9I8V2"},{"id":"T58","span":{"begin":39,"end":44},"obj":"PR:P97588"},{"id":"T59","span":{"begin":39,"end":44},"obj":"Q15797"},{"id":"T60","span":{"begin":39,"end":44},"obj":"PR:000000363"},{"id":"T61","span":{"begin":39,"end":44},"obj":"PR:P70340"},{"id":"T62","span":{"begin":39,"end":44},"obj":"P70340"},{"id":"T63","span":{"begin":39,"end":44},"obj":"Q9I962"},{"id":"T64","span":{"begin":39,"end":44},"obj":"PR:Q15797"},{"id":"T65","span":{"begin":39,"end":44},"obj":"P97588"},{"id":"T66","span":{"begin":39,"end":44},"obj":"Q9I8V2"},{"id":"T67","span":{"begin":39,"end":44},"obj":"Q1JQA2"},{"id":"T68","span":{"begin":68,"end":83},"obj":"GO:0016310"},{"id":"T69","span":{"begin":116,"end":119},"obj":"PR:P41134"},{"id":"T70","span":{"begin":116,"end":119},"obj":"PR:P20067"},{"id":"T71","span":{"begin":116,"end":119},"obj":"PR:P41135"},{"id":"T72","span":{"begin":116,"end":119},"obj":"PR:000000039"},{"id":"T73","span":{"begin":120,"end":124},"obj":"D012333"},{"id":"T74","span":{"begin":120,"end":124},"obj":"CHEBI:33699"},{"id":"T75","span":{"begin":120,"end":124},"obj":"SO:0000234"},{"id":"T76","span":{"begin":129,"end":132},"obj":"PR:P41134"},{"id":"T77","span":{"begin":129,"end":132},"obj":"PR:P20067"},{"id":"T78","span":{"begin":129,"end":132},"obj":"PR:P41135"},{"id":"T79","span":{"begin":129,"end":132},"obj":"PR:000000039"}],"text":"P-6 rapidly induced phosphorylation of Smad1/5/8. Furthermore, Smad-phosphorylation was followed by upregulation of Id1 mRNA and Id1"}