PMC:1134658 / 18292-18465 JSONTXT

Annnotations TAB JSON ListView MergeView

    pmc-enju-pas

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    bionlp-st-ge-2016-spacy-parsed

    {"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T11555","span":{"begin":80,"end":85},"obj":"CD"},{"id":"T11556","span":{"begin":85,"end":86},"obj":"NNP"},{"id":"T11557","span":{"begin":87,"end":90},"obj":"CC"},{"id":"T11558","span":{"begin":91,"end":99},"obj":"JJ"},{"id":"T11559","span":{"begin":100,"end":106},"obj":"NNS"},{"id":"T11560","span":{"begin":107,"end":109},"obj":"IN"},{"id":"T11561","span":{"begin":110,"end":113},"obj":"NNP"},{"id":"T11562","span":{"begin":114,"end":117},"obj":"CC"},{"id":"T11563","span":{"begin":118,"end":121},"obj":"NNP"},{"id":"T11564","span":{"begin":122,"end":126},"obj":"VBP"},{"id":"T11565","span":{"begin":127,"end":131},"obj":"VBN"},{"id":"T11566","span":{"begin":132,"end":137},"obj":"VBN"},{"id":"T11567","span":{"begin":138,"end":140},"obj":"IN"},{"id":"T11568","span":{"begin":141,"end":144},"obj":"DT"},{"id":"T11569","span":{"begin":145,"end":152},"obj":"NN"},{"id":"T11570","span":{"begin":153,"end":155},"obj":"IN"},{"id":"T11571","span":{"begin":156,"end":167},"obj":"NNS"},{"id":"T11572","span":{"begin":168,"end":169},"obj":"NNP"},{"id":"T11573","span":{"begin":169,"end":171},"obj":"CD"},{"id":"T11574","span":{"begin":171,"end":172},"obj":"NNP"},{"id":"T11575","span":{"begin":172,"end":173},"obj":"."},{"id":"T11547","span":{"begin":45,"end":49},"obj":"NN"},{"id":"T11538","span":{"begin":0,"end":8},"obj":"RB"},{"id":"T11539","span":{"begin":8,"end":9},"obj":","},{"id":"T11540","span":{"begin":10,"end":15},"obj":"NNP"},{"id":"T11541","span":{"begin":16,"end":19},"obj":"VBZ"},{"id":"T11542","span":{"begin":20,"end":24},"obj":"VBN"},{"id":"T11543","span":{"begin":25,"end":34},"obj":"VBN"},{"id":"T11544","span":{"begin":35,"end":37},"obj":"TO"},{"id":"T11545","span":{"begin":38,"end":42},"obj":"VB"},{"id":"T11546","span":{"begin":43,"end":44},"obj":"DT"},{"id":"T11548","span":{"begin":50,"end":52},"obj":"IN"},{"id":"T11549","span":{"begin":53,"end":63},"obj":"JJ"},{"id":"T11550","span":{"begin":64,"end":73},"obj":"NNS"},{"id":"T11551","span":{"begin":74,"end":75},"obj":"-LRB-"},{"id":"T11552","span":{"begin":75,"end":77},"obj":"NNP"},{"id":"T11553","span":{"begin":77,"end":78},"obj":"-RRB-"},{"id":"T11554","span":{"begin":79,"end":80},"obj":"NNP"}],"relations":[{"id":"R9115","pred":"advmod","subj":"T11538","obj":"T11543"},{"id":"R9116","pred":"punct","subj":"T11539","obj":"T11543"},{"id":"R9117","pred":"nsubjpass","subj":"T11540","obj":"T11543"},{"id":"R9118","pred":"aux","subj":"T11541","obj":"T11543"},{"id":"R9119","pred":"auxpass","subj":"T11542","obj":"T11543"},{"id":"R9121","pred":"ROOT","subj":"T11543","obj":"T11543"},{"id":"R9125","pred":"aux","subj":"T11544","obj":"T11545"},{"id":"R9127","pred":"xcomp","subj":"T11545","obj":"T11543"},{"id":"R9129","pred":"det","subj":"T11546","obj":"T11547"},{"id":"R9130","pred":"dobj","subj":"T11547","obj":"T11545"},{"id":"R9132","pred":"prep","subj":"T11548","obj":"T11547"},{"id":"R9133","pred":"amod","subj":"T11549","obj":"T11550"},{"id":"R9134","pred":"pobj","subj":"T11550","obj":"T11548"},{"id":"R9136","pred":"punct","subj":"T11551","obj":"T11552"},{"id":"R9137","pred":"appos","subj":"T11552","obj":"T11550"},{"id":"R9139","pred":"punct","subj":"T11553","obj":"T11543"},{"id":"R9140","pred":"compound","subj":"T11554","obj":"T11556"},{"id":"R9141","pred":"compound","subj":"T11555","obj":"T11556"},{"id":"R9142","pred":"nsubjpass","subj":"T11556","obj":"T11566"},{"id":"R9144","pred":"cc","subj":"T11557","obj":"T11556"},{"id":"R9145","pred":"amod","subj":"T11558","obj":"T11559"},{"id":"R9146","pred":"conj","subj":"T11559","obj":"T11556"},{"id":"R9148","pred":"prep","subj":"T11560","obj":"T11559"},{"id":"R9149","pred":"pobj","subj":"T11561","obj":"T11560"},{"id":"R9150","pred":"cc","subj":"T11562","obj":"T11561"},{"id":"R9152","pred":"conj","subj":"T11563","obj":"T11561"},{"id":"R9153","pred":"aux","subj":"T11564","obj":"T11566"},{"id":"R9155","pred":"auxpass","subj":"T11565","obj":"T11566"},{"id":"R9156","pred":"ROOT","subj":"T11566","obj":"T11566"},{"id":"R9157","pred":"prep","subj":"T11567","obj":"T11566"},{"id":"R9159","pred":"det","subj":"T11568","obj":"T11569"},{"id":"R9160","pred":"pobj","subj":"T11569","obj":"T11567"},{"id":"R9161","pred":"prep","subj":"T11570","obj":"T11569"},{"id":"R9163","pred":"pobj","subj":"T11571","obj":"T11570"},{"id":"R9164","pred":"quantmod","subj":"T11572","obj":"T11574"},{"id":"R9165","pred":"nummod","subj":"T11573","obj":"T11574"},{"id":"R9167","pred":"appos","subj":"T11574","obj":"T11569"},{"id":"R9168","pred":"punct","subj":"T11575","obj":"T11566"}],"text":"Moreover, BMP-6 has been suggested to play a role in rheumatoid arthritis (RA) [43,44] and elevated levels of Id1 and Id3 have been found in the synovia of RA-patients [45]."}

    sentences

    {"project":"sentences","denotations":[{"id":"T7854","span":{"begin":0,"end":173},"obj":"Sentence"},{"id":"T143","span":{"begin":0,"end":173},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Moreover, BMP-6 has been suggested to play a role in rheumatoid arthritis (RA) [43,44] and elevated levels of Id1 and Id3 have been found in the synovia of RA-patients [45]."}

    ICD10

    {"project":"ICD10","denotations":[{"id":"T12303","span":{"begin":53,"end":73},"obj":"http://purl.bioontology.org/ontology/ICD10/M06.9"},{"id":"T12304","span":{"begin":64,"end":73},"obj":"http://purl.bioontology.org/ontology/ICD10/M13.9"}],"text":"Moreover, BMP-6 has been suggested to play a role in rheumatoid arthritis (RA) [43,44] and elevated levels of Id1 and Id3 have been found in the synovia of RA-patients [45]."}

    events-check-again

    {"project":"events-check-again","denotations":[{"id":"T13135","span":{"begin":10,"end":15},"obj":"Protein"},{"id":"T13136","span":{"begin":91,"end":99},"obj":"Positive_regulation"},{"id":"T13137","span":{"begin":91,"end":99},"obj":"Positive_regulation"},{"id":"T13138","span":{"begin":100,"end":106},"obj":"Gene_expression"},{"id":"T13139","span":{"begin":100,"end":106},"obj":"Gene_expression"},{"id":"T13140","span":{"begin":110,"end":113},"obj":"Protein"},{"id":"T13141","span":{"begin":118,"end":121},"obj":"Protein"}],"relations":[{"id":"R10333","pred":"themeOf","subj":"T13140","obj":"T13138"},{"id":"R10334","pred":"themeOf","subj":"T13141","obj":"T13139"},{"id":"R10325","pred":"themeOf","subj":"T13138","obj":"T13137"},{"id":"R10328","pred":"themeOf","subj":"T13139","obj":"T13136"}],"text":"Moreover, BMP-6 has been suggested to play a role in rheumatoid arthritis (RA) [43,44] and elevated levels of Id1 and Id3 have been found in the synovia of RA-patients [45]."}

    bionlp-st-ge-2016-reference-tees

    {"project":"bionlp-st-ge-2016-reference-tees","denotations":[{"id":"T12442","span":{"begin":10,"end":15},"obj":"Protein"},{"id":"T12443","span":{"begin":91,"end":99},"obj":"Positive_regulation"},{"id":"T12444","span":{"begin":91,"end":99},"obj":"Positive_regulation"},{"id":"T12445","span":{"begin":100,"end":106},"obj":"Gene_expression"},{"id":"T12446","span":{"begin":100,"end":106},"obj":"Gene_expression"},{"id":"T12447","span":{"begin":110,"end":113},"obj":"Protein"},{"id":"T12448","span":{"begin":118,"end":121},"obj":"Protein"}],"relations":[{"id":"R9881","pred":"themeOf","subj":"T12445","obj":"T12443"},{"id":"R9882","pred":"themeOf","subj":"T12446","obj":"T12444"},{"id":"R9883","pred":"themeOf","subj":"T12447","obj":"T12445"},{"id":"R9884","pred":"themeOf","subj":"T12448","obj":"T12446"}],"text":"Moreover, BMP-6 has been suggested to play a role in rheumatoid arthritis (RA) [43,44] and elevated levels of Id1 and Id3 have been found in the synovia of RA-patients [45]."}

    bionlp-st-ge-2016-reference

    {"project":"bionlp-st-ge-2016-reference","denotations":[{"id":"T7739","span":{"begin":10,"end":15},"obj":"Protein"},{"id":"T7740","span":{"begin":91,"end":99},"obj":"Positive_regulation"},{"id":"T7741","span":{"begin":91,"end":99},"obj":"Positive_regulation"},{"id":"T7742","span":{"begin":100,"end":106},"obj":"Gene_expression"},{"id":"T7743","span":{"begin":100,"end":106},"obj":"Gene_expression"},{"id":"T7744","span":{"begin":110,"end":113},"obj":"Protein"},{"id":"T7745","span":{"begin":118,"end":121},"obj":"Protein"}],"relations":[{"id":"R5938","pred":"themeOf","subj":"T7742","obj":"T7741"},{"id":"R5939","pred":"themeOf","subj":"T7743","obj":"T7740"},{"id":"R5940","pred":"themeOf","subj":"T7744","obj":"T7742"},{"id":"R5941","pred":"themeOf","subj":"T7745","obj":"T7743"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"Moreover, BMP-6 has been suggested to play a role in rheumatoid arthritis (RA) [43,44] and elevated levels of Id1 and Id3 have been found in the synovia of RA-patients [45]."}

    bionlp-st-ge-2016-uniprot

    {"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T10083","span":{"begin":10,"end":13},"obj":"P22004"},{"id":"T10084","span":{"begin":10,"end":13},"obj":"P18075"},{"id":"T10085","span":{"begin":10,"end":13},"obj":"P12644"},{"id":"T10086","span":{"begin":10,"end":13},"obj":"P12643"},{"id":"T10087","span":{"begin":10,"end":15},"obj":"P22004"},{"id":"T10088","span":{"begin":110,"end":113},"obj":"P41134"},{"id":"T10089","span":{"begin":118,"end":121},"obj":"Q02535"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"Moreover, BMP-6 has been suggested to play a role in rheumatoid arthritis (RA) [43,44] and elevated levels of Id1 and Id3 have been found in the synovia of RA-patients [45]."}

    test2

    {"project":"test2","denotations":[{"id":"T7488","span":{"begin":10,"end":15},"obj":"Protein"},{"id":"T7489","span":{"begin":91,"end":99},"obj":"Positive_regulation"},{"id":"T7490","span":{"begin":110,"end":113},"obj":"Protein"},{"id":"T7491","span":{"begin":118,"end":121},"obj":"Protein"}],"relations":[{"id":"R5800","pred":"causeOf","subj":"T7488","obj":"T7489"}],"text":"Moreover, BMP-6 has been suggested to play a role in rheumatoid arthritis (RA) [43,44] and elevated levels of Id1 and Id3 have been found in the synovia of RA-patients [45]."}

    tees-test

    {"project":"tees-test","denotations":[{"id":"T2086","span":{"begin":10,"end":15},"obj":"D055418"},{"id":"T2087","span":{"begin":10,"end":15},"obj":"D055418"},{"id":"T2088","span":{"begin":10,"end":15},"obj":"Q04906"},{"id":"T2089","span":{"begin":10,"end":15},"obj":"PR:000000167"},{"id":"T2090","span":{"begin":10,"end":15},"obj":"P20722"},{"id":"T2091","span":{"begin":10,"end":15},"obj":"PR:Q04906"},{"id":"T2092","span":{"begin":10,"end":15},"obj":"P22004"},{"id":"T2093","span":{"begin":10,"end":15},"obj":"PR:P22004"},{"id":"T2094","span":{"begin":10,"end":15},"obj":"PR:P20722"},{"id":"T2095","span":{"begin":53,"end":73},"obj":"D001172"},{"id":"T2096","span":{"begin":53,"end":73},"obj":"D001172"},{"id":"T2097","span":{"begin":110,"end":113},"obj":"PR:P41134"},{"id":"T2098","span":{"begin":110,"end":113},"obj":"PR:P20067"},{"id":"T2099","span":{"begin":110,"end":113},"obj":"PR:P41135"},{"id":"T2100","span":{"begin":110,"end":113},"obj":"PR:000000039"},{"id":"T2101","span":{"begin":118,"end":121},"obj":"PR:P41133"},{"id":"T2102","span":{"begin":118,"end":121},"obj":"PR:P41138"},{"id":"T2103","span":{"begin":118,"end":121},"obj":"PR:Q02535"},{"id":"T2104","span":{"begin":118,"end":121},"obj":"PR:000000041"}],"text":"Moreover, BMP-6 has been suggested to play a role in rheumatoid arthritis (RA) [43,44] and elevated levels of Id1 and Id3 have been found in the synovia of RA-patients [45]."}