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PMC:1087847 / 22959-24185 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T6520 0-2 IN denotes In
T6521 27-32 VBD denotes noted
T6522 3-6 DT denotes the
T6523 18-23 NN denotes brain
T6524 7-17 VBG denotes developing
T6525 24-26 PRP denotes we
T6526 33-34 DT denotes a
T6527 44-50 NN denotes change
T6528 35-43 JJ denotes striking
T6529 51-53 IN denotes in
T6530 54-57 DT denotes the
T6531 70-82 NN denotes distribution
T6532 58-69 JJ denotes subcellular
T6533 83-85 IN denotes of
T6534 86-93 NN denotes Annexin
T6535 94-96 NN denotes A7
T6536 96-97 . denotes .
T6537 97-265 sentence denotes Cells in the stratum germinativum of the neopallial cortex, which surrounds the lateral ventricle, show at E13 and E15 a staining for Annexin A7 mainly in the cytosol.
T6538 98-103 NNS denotes Cells
T6539 197-201 VBP denotes show
T6540 104-106 IN denotes in
T6541 107-110 DT denotes the
T6542 119-131 NN denotes germinativum
T6543 111-118 NN denotes stratum
T6544 132-134 IN denotes of
T6545 135-138 DT denotes the
T6546 150-156 NN denotes cortex
T6547 139-149 JJ denotes neopallial
T6548 156-158 , denotes ,
T6549 158-163 WDT denotes which
T6550 164-173 VBZ denotes surrounds
T6551 174-177 DT denotes the
T6552 186-195 NN denotes ventricle
T6553 178-185 JJ denotes lateral
T6554 195-197 , denotes ,
T6555 202-204 IN denotes at
T6556 205-208 NN denotes E13
T6557 209-212 CC denotes and
T6558 213-216 NN denotes E15
T6559 217-218 DT denotes a
T6560 219-227 NN denotes staining
T6561 228-231 IN denotes for
T6562 232-239 NN denotes Annexin
T6563 240-242 NN denotes A7
T6564 243-249 RB denotes mainly
T6565 250-252 IN denotes in
T6566 253-256 DT denotes the
T6567 257-264 NN denotes cytosol
T6568 264-265 . denotes .
T6569 265-433 sentence denotes But this staining largely disappears and at the following day E16 we detect Annexin A7 in the nucleus of cells in the intermediate and marginal zone of the neopallium.
T6570 266-269 CC denotes But
T6571 292-302 VBZ denotes disappears
T6572 270-274 DT denotes this
T6573 275-283 NN denotes staining
T6574 284-291 RB denotes largely
T6575 303-306 CC denotes and
T6576 307-309 IN denotes at
T6577 335-341 VBP denotes detect
T6578 310-313 DT denotes the
T6579 324-327 NN denotes day
T6580 314-323 VBG denotes following
T6581 328-331 NN denotes E16
T6582 332-334 PRP denotes we
T6583 342-349 NN denotes Annexin
T6584 350-352 NN denotes A7
T6585 353-355 IN denotes in
T6586 356-359 DT denotes the
T6587 360-367 NN denotes nucleus
T6588 368-370 IN denotes of
T6589 371-376 NNS denotes cells
T6590 377-379 IN denotes in
T6591 380-383 DT denotes the
T6592 410-414 NN denotes zone
T6593 384-396 JJ denotes intermediate
T6594 397-400 CC denotes and
T6595 401-409 JJ denotes marginal
T6596 415-417 IN denotes of
T6597 418-421 DT denotes the
T6598 422-432 NN denotes neopallium
T6599 432-433 . denotes .
T6600 433-743 sentence denotes The different expression patterns of Annexin A7-positive cells from the ventricular germinative zone to the marginal zone of the later neocortex observed in this study are similar to the developmental patterns of Tenascin-C-positive astroglial precursors following the guidance of the radial glial cells [18].
T6601 434-437 DT denotes The
T6602 459-467 NNS denotes patterns
T6603 438-447 JJ denotes different
T6604 448-458 NN denotes expression
T6605 602-605 VBP denotes are
T6606 468-470 IN denotes of
T6607 471-478 NN denotes Annexin
T6608 479-481 NN denotes A7
T6609 482-490 JJ denotes positive
T6610 481-482 HYPH denotes -
T6611 491-496 NNS denotes cells
T6612 497-501 IN denotes from
T6613 502-505 DT denotes the
T6614 530-534 NN denotes zone
T6615 506-517 JJ denotes ventricular
T6616 518-529 JJ denotes germinative
T6617 535-537 IN denotes to
T6618 538-541 DT denotes the
T6619 551-555 NN denotes zone
T6620 542-550 JJ denotes marginal
T6621 556-558 IN denotes of
T6622 559-562 DT denotes the
T6623 569-578 NN denotes neocortex
T6624 563-568 JJ denotes later
T6625 579-587 VBN denotes observed
T6626 588-590 IN denotes in
T6627 591-595 DT denotes this
T6628 596-601 NN denotes study
T6629 606-613 JJ denotes similar
T6630 614-616 IN denotes to
T6631 617-620 DT denotes the
T6632 635-643 NNS denotes patterns
T6633 621-634 JJ denotes developmental
T6634 644-646 IN denotes of
T6635 647-655 NN denotes Tenascin
T6636 656-657 NN denotes C
T6637 655-656 HYPH denotes -
T6638 658-666 JJ denotes positive
T6639 657-658 HYPH denotes -
T6640 678-688 NNS denotes precursors
T6641 667-677 JJ denotes astroglial
T6642 689-698 VBG denotes following
T6643 699-702 DT denotes the
T6644 703-711 NN denotes guidance
T6645 712-714 IN denotes of
T6646 715-718 DT denotes the
T6647 732-737 NNS denotes cells
T6648 719-725 JJ denotes radial
T6649 726-731 JJ denotes glial
T6650 738-739 -LRB- denotes [
T6651 739-741 CD denotes 18
T6652 741-742 -RRB- denotes ]
T6653 742-743 . denotes .
T6654 743-852 sentence denotes Moreover, the patterns resemble that of migrating and differentiated neurons described by Berry et al. [13].
T6655 744-752 RB denotes Moreover
T6656 767-775 VBP denotes resemble
T6657 752-754 , denotes ,
T6658 754-757 DT denotes the
T6659 758-766 NNS denotes patterns
T6660 776-780 DT denotes that
T6661 781-783 IN denotes of
T6662 784-793 VBG denotes migrating
T6663 813-820 NNS denotes neurons
T6664 794-797 CC denotes and
T6665 798-812 VBN denotes differentiated
T6666 821-830 VBN denotes described
T6667 831-833 IN denotes by
T6668 834-839 NNP denotes Berry
T6669 840-842 FW denotes et
T6670 843-846 FW denotes al.
T6671 847-848 -LRB- denotes [
T6672 848-850 CD denotes 13
T6673 850-851 -RRB- denotes ]
T6674 851-852 . denotes .
T6675 852-1103 sentence denotes Neurons that are generated prenatally in the proliferative ventricular layer of the neopallial cortex subsequently migrate through the intermediate zone to form the different cortical cell layers in a declining inside-out gradient of cell maturation.
T6676 853-860 NNS denotes Neurons
T6677 968-975 VBP denotes migrate
T6678 861-865 WDT denotes that
T6679 870-879 VBN denotes generated
T6680 866-869 VBP denotes are
T6681 880-890 RB denotes prenatally
T6682 891-893 IN denotes in
T6683 894-897 DT denotes the
T6684 924-929 NN denotes layer
T6685 898-911 JJ denotes proliferative
T6686 912-923 JJ denotes ventricular
T6687 930-932 IN denotes of
T6688 933-936 DT denotes the
T6689 948-954 NN denotes cortex
T6690 937-947 JJ denotes neopallial
T6691 955-967 RB denotes subsequently
T6692 976-983 IN denotes through
T6693 984-987 DT denotes the
T6694 1001-1005 NN denotes zone
T6695 988-1000 JJ denotes intermediate
T6696 1006-1008 TO denotes to
T6697 1009-1013 VB denotes form
T6698 1014-1017 DT denotes the
T6699 1042-1048 NNS denotes layers
T6700 1018-1027 JJ denotes different
T6701 1028-1036 JJ denotes cortical
T6702 1037-1041 NN denotes cell
T6703 1049-1051 IN denotes in
T6704 1052-1053 DT denotes a
T6705 1075-1083 NN denotes gradient
T6706 1054-1063 VBG denotes declining
T6707 1064-1070 JJ denotes inside
T6708 1071-1074 JJ denotes out
T6709 1070-1071 HYPH denotes -
T6710 1084-1086 IN denotes of
T6711 1087-1091 NN denotes cell
T6712 1092-1102 NN denotes maturation
T6713 1102-1103 . denotes .
T6714 1103-1226 sentence denotes These observations suggested that the subcellular localization of Annexin A7 depends on developmental stage and cell type.
T6715 1104-1109 DT denotes These
T6716 1110-1122 NNS denotes observations
T6717 1123-1132 VBD denotes suggested
T6718 1133-1137 IN denotes that
T6719 1181-1188 VBZ denotes depends
T6720 1138-1141 DT denotes the
T6721 1154-1166 NN denotes localization
T6722 1142-1153 JJ denotes subcellular
T6723 1167-1169 IN denotes of
T6724 1170-1177 NN denotes Annexin
T6725 1178-1180 NN denotes A7
T6726 1189-1191 IN denotes on
T6727 1192-1205 JJ denotes developmental
T6728 1206-1211 NN denotes stage
T6729 1212-1215 CC denotes and
T6730 1216-1220 NN denotes cell
T6731 1221-1225 NN denotes type
T6732 1225-1226 . denotes .
R2692 T6520 T6521 prep In,noted
R2693 T6522 T6523 det the,brain
R2694 T6523 T6520 pobj brain,In
R2695 T6524 T6523 amod developing,brain
R2696 T6525 T6521 nsubj we,noted
R2697 T6526 T6527 det a,change
R2698 T6527 T6521 dobj change,noted
R2699 T6528 T6527 amod striking,change
R2700 T6529 T6527 prep in,change
R2701 T6530 T6531 det the,distribution
R2702 T6531 T6529 pobj distribution,in
R2703 T6532 T6531 amod subcellular,distribution
R2704 T6533 T6531 prep of,distribution
R2705 T6534 T6535 compound Annexin,A7
R2706 T6535 T6533 pobj A7,of
R2707 T6536 T6521 punct .,noted
R2708 T6538 T6539 nsubj Cells,show
R2709 T6540 T6538 prep in,Cells
R2710 T6541 T6542 det the,germinativum
R2711 T6542 T6540 pobj germinativum,in
R2712 T6543 T6542 compound stratum,germinativum
R2713 T6544 T6542 prep of,germinativum
R2714 T6545 T6546 det the,cortex
R2715 T6546 T6544 pobj cortex,of
R2716 T6547 T6546 amod neopallial,cortex
R2717 T6548 T6546 punct ", ",cortex
R2718 T6549 T6550 dep which,surrounds
R2719 T6550 T6546 relcl surrounds,cortex
R2720 T6551 T6552 det the,ventricle
R2721 T6552 T6550 dobj ventricle,surrounds
R2722 T6553 T6552 amod lateral,ventricle
R2723 T6554 T6539 punct ", ",show
R2724 T6555 T6539 prep at,show
R2725 T6556 T6555 pobj E13,at
R2726 T6557 T6556 cc and,E13
R2727 T6558 T6556 conj E15,E13
R2728 T6559 T6560 det a,staining
R2729 T6560 T6539 dobj staining,show
R2730 T6561 T6560 prep for,staining
R2731 T6562 T6563 compound Annexin,A7
R2732 T6563 T6561 pobj A7,for
R2733 T6564 T6565 advmod mainly,in
R2734 T6565 T6539 prep in,show
R2735 T6566 T6567 det the,cytosol
R2736 T6567 T6565 pobj cytosol,in
R2737 T6568 T6539 punct .,show
R2738 T6570 T6571 cc But,disappears
R2739 T6572 T6573 det this,staining
R2740 T6573 T6571 nsubj staining,disappears
R2741 T6574 T6571 advmod largely,disappears
R2742 T6575 T6571 cc and,disappears
R2743 T6576 T6577 prep at,detect
R2744 T6577 T6571 conj detect,disappears
R2745 T6578 T6579 det the,day
R2746 T6579 T6576 pobj day,at
R2747 T6580 T6579 amod following,day
R2748 T6581 T6579 appos E16,day
R2749 T6582 T6577 nsubj we,detect
R2750 T6583 T6584 compound Annexin,A7
R2751 T6584 T6577 dobj A7,detect
R2752 T6585 T6577 prep in,detect
R2753 T6586 T6587 det the,nucleus
R2754 T6587 T6585 pobj nucleus,in
R2755 T6588 T6587 prep of,nucleus
R2756 T6589 T6588 pobj cells,of
R2757 T6590 T6577 prep in,detect
R2758 T6591 T6592 det the,zone
R2759 T6592 T6590 pobj zone,in
R2760 T6593 T6592 amod intermediate,zone
R2761 T6594 T6593 cc and,intermediate
R2762 T6595 T6593 conj marginal,intermediate
R2763 T6596 T6592 prep of,zone
R2764 T6597 T6598 det the,neopallium
R2765 T6598 T6596 pobj neopallium,of
R2766 T6599 T6577 punct .,detect
R2767 T6601 T6602 det The,patterns
R2768 T6602 T6605 nsubj patterns,are
R2769 T6603 T6602 amod different,patterns
R2770 T6604 T6602 compound expression,patterns
R2771 T6606 T6602 prep of,patterns
R2772 T6607 T6608 compound Annexin,A7
R2773 T6608 T6609 npadvmod A7,positive
R2774 T6609 T6611 amod positive,cells
R2775 T6610 T6609 punct -,positive
R2776 T6611 T6606 pobj cells,of
R2777 T6612 T6602 prep from,patterns
R2778 T6613 T6614 det the,zone
R2779 T6614 T6612 pobj zone,from
R2780 T6615 T6614 amod ventricular,zone
R2781 T6616 T6614 amod germinative,zone
R2782 T6617 T6612 prep to,from
R2783 T6618 T6619 det the,zone
R2784 T6619 T6617 pobj zone,to
R2785 T6620 T6619 amod marginal,zone
R2786 T6621 T6612 prep of,from
R2787 T6622 T6623 det the,neocortex
R2788 T6623 T6621 pobj neocortex,of
R2789 T6624 T6623 amod later,neocortex
R2790 T6625 T6602 acl observed,patterns
R2791 T6626 T6625 prep in,observed
R2792 T6627 T6628 det this,study
R2793 T6628 T6626 pobj study,in
R2794 T6629 T6605 acomp similar,are
R2795 T6630 T6629 prep to,similar
R2796 T6631 T6632 det the,patterns
R2797 T6632 T6630 pobj patterns,to
R2798 T6633 T6632 amod developmental,patterns
R2799 T6634 T6632 prep of,patterns
R2800 T6635 T6636 compound Tenascin,C
R2801 T6636 T6638 npadvmod C,positive
R2802 T6637 T6636 punct -,C
R2803 T6638 T6640 amod positive,precursors
R2804 T6639 T6638 punct -,positive
R2805 T6640 T6634 pobj precursors,of
R2806 T6641 T6640 amod astroglial,precursors
R2807 T6642 T6640 acl following,precursors
R2808 T6643 T6644 det the,guidance
R2809 T6644 T6642 dobj guidance,following
R2810 T6645 T6644 prep of,guidance
R2811 T6646 T6647 det the,cells
R2812 T6647 T6645 pobj cells,of
R2813 T6648 T6647 amod radial,cells
R2814 T6649 T6647 amod glial,cells
R2815 T6650 T6651 punct [,18
R2816 T6651 T6605 parataxis 18,are
R2817 T6652 T6651 punct ],18
R2818 T6653 T6605 punct .,are
R2819 T6655 T6656 advmod Moreover,resemble
R2820 T6657 T6656 punct ", ",resemble
R2821 T6658 T6659 det the,patterns
R2822 T6659 T6656 nsubj patterns,resemble
R2823 T6660 T6656 dobj that,resemble
R2824 T6661 T6660 prep of,that
R2825 T6662 T6663 amod migrating,neurons
R2826 T6663 T6661 pobj neurons,of
R2827 T6664 T6662 cc and,migrating
R2828 T6665 T6662 conj differentiated,migrating
R2829 T6666 T6663 acl described,neurons
R2830 T6667 T6666 agent by,described
R2831 T6668 T6667 pobj Berry,by
R2832 T6669 T6670 advmod et,al.
R2833 T6670 T6668 advmod al.,Berry
R2834 T6671 T6672 punct [,13
R2835 T6672 T6656 parataxis 13,resemble
R2836 T6673 T6672 punct ],13
R2837 T6674 T6656 punct .,resemble
R2838 T6676 T6677 nsubj Neurons,migrate
R2839 T6678 T6679 dep that,generated
R2840 T6679 T6676 relcl generated,Neurons
R2841 T6680 T6679 auxpass are,generated
R2842 T6681 T6679 advmod prenatally,generated
R2843 T6682 T6679 prep in,generated
R2844 T6683 T6684 det the,layer
R2845 T6684 T6682 pobj layer,in
R2846 T6685 T6684 amod proliferative,layer
R2847 T6686 T6684 amod ventricular,layer
R2848 T6687 T6684 prep of,layer
R2849 T6688 T6689 det the,cortex
R2850 T6689 T6687 pobj cortex,of
R2851 T6690 T6689 amod neopallial,cortex
R2852 T6691 T6677 advmod subsequently,migrate
R2853 T6692 T6677 prep through,migrate
R2854 T6693 T6694 det the,zone
R2855 T6694 T6692 pobj zone,through
R2856 T6695 T6694 amod intermediate,zone
R2857 T6696 T6697 aux to,form
R2858 T6697 T6677 advcl form,migrate
R2859 T6698 T6699 det the,layers
R2860 T6699 T6697 dobj layers,form
R2861 T6700 T6699 amod different,layers
R2862 T6701 T6699 amod cortical,layers
R2863 T6702 T6699 compound cell,layers
R2864 T6703 T6697 prep in,form
R2865 T6704 T6705 det a,gradient
R2866 T6705 T6703 pobj gradient,in
R2867 T6706 T6705 amod declining,gradient
R2868 T6707 T6708 amod inside,out
R2869 T6708 T6705 amod out,gradient
R2870 T6709 T6708 punct -,out
R2871 T6710 T6705 prep of,gradient
R2872 T6711 T6712 compound cell,maturation
R2873 T6712 T6710 pobj maturation,of
R2874 T6713 T6677 punct .,migrate
R2875 T6715 T6716 det These,observations
R2876 T6716 T6717 nsubj observations,suggested
R2877 T6718 T6719 mark that,depends
R2878 T6719 T6717 ccomp depends,suggested
R2879 T6720 T6721 det the,localization
R2880 T6721 T6719 nsubj localization,depends
R2881 T6722 T6721 amod subcellular,localization
R2882 T6723 T6721 prep of,localization
R2883 T6724 T6725 compound Annexin,A7
R2884 T6725 T6723 pobj A7,of
R2885 T6726 T6719 prep on,depends
R2886 T6727 T6728 amod developmental,stage
R2887 T6728 T6726 pobj stage,on
R2888 T6729 T6728 cc and,stage
R2889 T6730 T6731 compound cell,type
R2890 T6731 T6728 conj type,stage
R2891 T6732 T6717 punct .,suggested

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6103 18-23 UBERON:0000955 denotes brain
T6104 58-69 GO_UBERON_EXT:cellular_component_or_cell_part denotes subcellular
T6105 61-69 CL_GO_EXT:cell denotes cellular
T6106 86-96 PR_EXT:000004080 denotes Annexin A7
T6107 98-103 CL_GO_EXT:cell denotes Cells
T6108 111-118 _FRAGMENT denotes stratum
T6109 132-134 _FRAGMENT denotes of
T6110 139-156 UBERON:0002301 denotes neopallial cortex
T6111 178-195 UBERON:0002285 denotes lateral ventricle
T6112 232-242 PR_EXT:000004080 denotes Annexin A7
T6113 257-264 GO:0005829 denotes cytosol
T6114 342-352 PR_EXT:000004080 denotes Annexin A7
T6115 360-376 GO:0005634 denotes nucleus of cells
T6116 371-376 CL_GO_EXT:cell denotes cells
T6117 422-432 UBERON:0001950 denotes neopallium
T6118 448-458 GO:0010467 denotes expression
T6119 471-481 PR_EXT:000004080 denotes Annexin A7
T6120 491-496 CL_GO_EXT:cell denotes cells
T6121 506-534 UBERON:0003053 denotes ventricular germinative zone
T6122 569-578 UBERON:0001950 denotes neocortex
T6123 647-657 PR_EXT:000016471 denotes Tenascin-C
T6124 667-677 CL:0000127 denotes astroglial
T6125 703-711 GO_EXT:biological_direction_or_guidance denotes guidance
T6126 719-737 CL:0000681 denotes radial glial cells
T6127 732-737 CL_GO_EXT:cell denotes cells
T6128 784-793 GO_EXT:biological_movement_or_translocation_process denotes migrating
T6129 798-812 GO_PATO_RO_EXT:developmental_differentiation_process_or_quality denotes differentiated
T6130 813-820 CL:0000540 denotes neurons
T6131 853-860 CL:0000540 denotes Neurons
T6132 883-890 GO:0007567 denotes natally
T6133 898-911 GO_PATO_EXT:cell_proliferation_or_proliferativity denotes proliferative
T6134 898-929 UBERON:0003053 denotes proliferative ventricular layer
T6135 937-954 UBERON:0001950 denotes neopallial cortex
T6136 968-975 GO_EXT:biological_movement_or_translocation_process denotes migrate
T6137 1028-1036 UBERON:0001851 denotes cortical
T6138 1037-1041 CL_GO_EXT:cell denotes cell
T6139 1037-1048 UBERON:0000119 denotes cell layers
T6140 1087-1091 CL_GO_EXT:cell denotes cell
T6141 1087-1102 GO:0048469 denotes cell maturation
T6142 1142-1153 GO_UBERON_EXT:cellular_component_or_cell_part denotes subcellular
T6143 1145-1153 CL_GO_EXT:cell denotes cellular
T6144 1154-1166 GO_PATO_EXT:biological_localization_process_or_quality denotes localization
T6145 1170-1180 PR_EXT:000004080 denotes Annexin A7
T6146 1216-1220 CL_GO_EXT:cell denotes cell
R2582 T6109 T6108 _lexicallyChainedTo of,stratum
R2583 T6110 T6109 _lexicallyChainedTo neopallial cortex,of

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T5862 1170-1180 PR:000004080 denotes Annexin A7
T5836 18-23 UBERON:0000955 denotes brain
T5837 86-96 PR:000004080 denotes Annexin A7
T5838 111-118 _FRAGMENT denotes stratum
T5839 132-134 _FRAGMENT denotes of
T5840 139-156 UBERON:0002301 denotes neopallial cortex
T5841 178-195 UBERON:0002285 denotes lateral ventricle
T5842 232-242 PR:000004080 denotes Annexin A7
T5843 257-264 GO:0005829 denotes cytosol
T5844 342-352 PR:000004080 denotes Annexin A7
T5845 360-376 GO:0005634 denotes nucleus of cells
T5846 422-432 UBERON:0001950 denotes neopallium
T5847 448-458 GO:0010467 denotes expression
T5848 471-481 PR:000004080 denotes Annexin A7
T5849 506-534 UBERON:0003053 denotes ventricular germinative zone
T5850 569-578 UBERON:0001950 denotes neocortex
T5851 647-657 PR:000016471 denotes Tenascin-C
T5852 667-677 CL:0000127 denotes astroglial
T5853 719-737 CL:0000681 denotes radial glial cells
T5854 813-820 CL:0000540 denotes neurons
T5855 853-860 CL:0000540 denotes Neurons
T5856 883-890 GO:0007567 denotes natally
T5857 898-929 UBERON:0003053 denotes proliferative ventricular layer
T5858 937-954 UBERON:0001950 denotes neopallial cortex
T5859 1028-1036 UBERON:0001851 denotes cortical
T5860 1037-1048 UBERON:0000119 denotes cell layers
T5861 1087-1102 GO:0048469 denotes cell maturation
R2567 T5839 T5838 _lexicallyChainedTo of,stratum
R2568 T5840 T5839 _lexicallyChainedTo neopallial cortex,of