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PMC:1087847 / 20763-21047 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T5423 0-284 sentence denotes For control, antibodies against LAP2α, Emerin and tubulin were used to verify that the nucleoplasm (marker:LAP2α, which is anon-membrane-bound isoform of LAP2) was successfully extracted and also not contaminated by nuclear membranes (marker:Emerin) or by cytoplasm (marker:tubulin).
T5424 1-4 IN denotes For
T5425 64-68 VBN denotes used
T5426 5-12 NN denotes control
T5427 12-14 , denotes ,
T5428 14-24 NNS denotes antibodies
T5429 25-32 IN denotes against
T5430 33-38 NN denotes LAP2α
T5431 38-40 , denotes ,
T5432 40-46 NN denotes Emerin
T5433 47-50 CC denotes and
T5434 51-58 NN denotes tubulin
T5435 59-63 VBD denotes were
T5436 69-71 TO denotes to
T5437 72-78 VB denotes verify
T5438 79-83 IN denotes that
T5439 178-187 VBN denotes extracted
T5440 84-87 DT denotes the
T5441 88-99 NN denotes nucleoplasm
T5442 100-101 -LRB- denotes (
T5443 108-113 NN denotes LAP2α
T5444 101-107 NN denotes marker
T5445 107-108 : denotes :
T5446 113-115 , denotes ,
T5447 115-120 WDT denotes which
T5448 121-123 VBZ denotes is
T5449 124-128 NN denotes anon
T5450 129-137 NN denotes membrane
T5451 128-129 HYPH denotes -
T5452 138-143 VBN denotes bound
T5453 137-138 HYPH denotes -
T5454 144-151 NN denotes isoform
T5455 152-154 IN denotes of
T5456 155-159 NN denotes LAP2
T5457 159-160 -RRB- denotes )
T5458 161-164 VBD denotes was
T5459 165-177 RB denotes successfully
T5460 188-191 CC denotes and
T5461 192-196 RB denotes also
T5462 197-200 RB denotes not
T5463 201-213 VBN denotes contaminated
T5464 214-216 IN denotes by
T5465 217-224 JJ denotes nuclear
T5466 225-234 NNS denotes membranes
T5467 235-236 -LRB- denotes (
T5468 243-249 NN denotes Emerin
T5469 236-242 NN denotes marker
T5470 242-243 : denotes :
T5471 249-250 -RRB- denotes )
T5472 251-253 CC denotes or
T5473 254-256 IN denotes by
T5474 257-266 NN denotes cytoplasm
T5475 267-268 -LRB- denotes (
T5476 275-282 NN denotes tubulin
T5477 268-274 NN denotes marker
T5478 274-275 : denotes :
T5479 282-283 -RRB- denotes )
T5480 283-284 . denotes .
R2448 T5424 T5425 prep For,used
R2449 T5426 T5424 pobj control,For
R2450 T5427 T5425 punct ", ",used
R2451 T5428 T5425 nsubjpass antibodies,used
R2452 T5429 T5428 prep against,antibodies
R2453 T5430 T5429 pobj LAP2α,against
R2454 T5431 T5430 punct ", ",LAP2α
R2455 T5432 T5430 conj Emerin,LAP2α
R2456 T5433 T5432 cc and,Emerin
R2457 T5434 T5432 conj tubulin,Emerin
R2458 T5435 T5425 auxpass were,used
R2459 T5436 T5437 aux to,verify
R2460 T5437 T5425 advcl verify,used
R2461 T5438 T5439 mark that,extracted
R2462 T5439 T5437 ccomp extracted,verify
R2463 T5440 T5441 det the,nucleoplasm
R2464 T5441 T5439 nsubjpass nucleoplasm,extracted
R2465 T5442 T5443 punct (,LAP2α
R2466 T5443 T5441 parataxis LAP2α,nucleoplasm
R2467 T5444 T5443 dep marker,LAP2α
R2468 T5445 T5443 punct :,LAP2α
R2469 T5446 T5443 punct ", ",LAP2α
R2470 T5447 T5448 dep which,is
R2471 T5448 T5443 relcl is,LAP2α
R2472 T5449 T5450 compound anon,membrane
R2473 T5450 T5452 npadvmod membrane,bound
R2474 T5451 T5450 punct -,membrane
R2475 T5452 T5454 amod bound,isoform
R2476 T5453 T5452 punct -,bound
R2477 T5454 T5448 attr isoform,is
R2478 T5455 T5454 prep of,isoform
R2479 T5456 T5455 pobj LAP2,of
R2480 T5457 T5443 punct ),LAP2α
R2481 T5458 T5439 auxpass was,extracted
R2482 T5459 T5439 advmod successfully,extracted
R2483 T5460 T5439 cc and,extracted
R2484 T5461 T5460 advmod also,and
R2485 T5462 T5463 neg not,contaminated
R2486 T5463 T5439 conj contaminated,extracted
R2487 T5464 T5463 prep by,contaminated
R2488 T5465 T5466 amod nuclear,membranes
R2489 T5466 T5464 pobj membranes,by
R2490 T5467 T5468 punct (,Emerin
R2491 T5468 T5466 parataxis Emerin,membranes
R2492 T5469 T5468 dep marker,Emerin
R2493 T5470 T5468 punct :,Emerin
R2494 T5471 T5468 punct ),Emerin
R2495 T5472 T5464 cc or,by
R2496 T5473 T5464 conj by,by
R2497 T5474 T5473 pobj cytoplasm,by
R2498 T5475 T5476 punct (,tubulin
R2499 T5476 T5474 parataxis tubulin,cytoplasm
R2500 T5477 T5476 dep marker,tubulin
R2501 T5478 T5476 punct :,tubulin
R2502 T5479 T5476 punct ),tubulin
R2503 T5480 T5425 punct .,used

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T5109 14-24 GO:0042571 denotes antibodies
T5110 33-38 PR_EXT:000037206 denotes LAP2α
T5111 40-46 PR_EXT:000007050 denotes Emerin
T5112 51-58 PR_EXT:000028799 denotes tubulin
T5113 88-99 GO:0005654 denotes nucleoplasm
T5114 101-107 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes marker
T5115 108-113 PR_EXT:000037206 denotes LAP2α
T5116 129-137 GO:0016020 denotes membrane
T5117 138-143 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes bound
T5118 144-151 SO_EXT:0001060 denotes isoform
T5119 155-159 PR_EXT:000029585 denotes LAP2
T5120 217-234 GO:0031965 denotes nuclear membranes
T5121 236-242 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes marker
T5122 243-249 PR_EXT:000007050 denotes Emerin
T5123 257-266 GO:0005737 denotes cytoplasm
T5124 268-274 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes marker
T5125 275-282 PR_EXT:000028799 denotes tubulin

biosemtest

Id Subject Object Predicate Lexical cue
T4623 76-82 UMLS/C1711411 denotes fy tha
T4625 8-15 UMLS/C1882979 denotes trol, a
T4627 143-148 UMLS/C2349209 denotes isof
T4629 143-148 UMLS/C1145667 denotes isof
T4631 44-50 UMLS/C0295734 denotes in and
T4632 248-254 UMLS/C0295734 denotes n) or
T4642 28-35 UMLS/C0521124 denotes inst LA
T4654 73-75 UMLS/C0319022 denotes er
T4656 206-218 UMLS/C1548791 denotes minated by n
T4691 143-148 UMLS/C1167622 denotes isof
T4700 44-50 UMLS/C1414386 denotes in and
T4701 248-254 UMLS/C1414386 denotes n) or
T4708 262-271 UMLS/C0010834 denotes lasm (mar
T4711 17-27 UMLS/C0021027 denotes ibodies ag
T4720 160-164 UMLS/C1420783 denotes was
T4730 206-218 UMLS/C2349974 denotes minated by n
T4734 8-15 UMLS/C0009932 denotes trol, a
T4742 92-103 UMLS/C0682537 denotes eoplasm (ma
T4749 76-82 UMLS/C1553511 denotes fy tha
T4750 55-62 UMLS/C0041348 denotes lin wer
T4780 183-192 UMLS/C0185115 denotes cted and
T4800 8-15 UMLS/C1550141 denotes trol, a
T4801 44-50 UP/P50402 denotes in and
T4802 248-254 UP/P50402 denotes n) or
T4818 183-192 UMLS/C1555707 denotes cted and
T4834 17-27 UMLS/C1621287 denotes ibodies ag
T4844 143-148 UMLS/C1689898 denotes isof
T4847 8-15 UMLS/C1547100 denotes trol, a
T4865 76-82 UMLS/C1554081 denotes fy tha
T4880 44-50 UP/O08579 denotes in and
T4881 248-254 UP/O08579 denotes n) or
T4887 183-192 UMLS/C1705851 denotes cted and
T4888 8-15 UMLS/C0243148 denotes trol, a
T4922 222-239 UMLS/C0028584 denotes ar membranes (mar
T4925 160-164 UMLS/C1825534 denotes was
T4926 143-148 UMLS/C0243122 denotes isof
T4938 8-15 UMLS/C0332298 denotes trol, a
T4939 44-50 UP/Q63190 denotes in and
T4940 248-254 UP/Q63190 denotes n) or
T4941 202-205 UMLS/C1518422 denotes ont
T4948 206-218 UMLS/C0205279 denotes minated by n
T4949 206-218 UMLS/C1548222 denotes minated by n
T4960 149-156 UMLS/C0597298 denotes rm of L
T4965 17-27 UMLS/C0003241 denotes ibodies ag
T4968 160-164 UMLS/C1705467 denotes was
T4974 105-111 UMLS/C0005516 denotes er:LAP
T4975 241-247 UMLS/C0005516 denotes r:Emer
T4976 273-279 UMLS/C0005516 denotes r:tubu
T4977 8-15 UMLS/C2587213 denotes trol, a
T4986 160-164 UMLS/C1333352 denotes was

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T5037 14-24 GO:0042571 denotes antibodies
T5038 33-38 PR:000037206 denotes LAP2α
T5039 40-46 PR:000007050 denotes Emerin
T5040 51-58 PR:000028799 denotes tubulin
T5041 88-99 GO:0005654 denotes nucleoplasm
T5042 108-113 PR:000037206 denotes LAP2α
T5043 129-137 GO:0016020 denotes membrane
T5044 144-151 SO:0001060 denotes isoform
T5045 155-159 PR:000029585 denotes LAP2
T5046 217-234 GO:0031965 denotes nuclear membranes
T5047 243-249 PR:000007050 denotes Emerin
T5048 257-266 GO:0005737 denotes cytoplasm
T5049 275-282 PR:000028799 denotes tubulin