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PMC:1064895 / 3116-3358 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T2196 209-214 Protein denotes TNF-α
T2195 199-204 Protein denotes IL-18
T2194 192-197 Protein denotes IL-15
T2193 186-190 Protein denotes IL-6
T2192 180-184 Protein denotes IL-1
T2191 92-104 Protein denotes interferon-γ
T2190 83-87 Protein denotes IL-2
T2162 209-214 Protein denotes TNF-α
T2161 199-204 Protein denotes IL-18
T2160 192-197 Protein denotes IL-15
T2159 186-190 Protein denotes IL-6
T2158 180-184 Protein denotes IL-1
T2157 92-104 Protein denotes interferon-γ
T2156 83-87 Protein denotes IL-2

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T3721 209-214 Protein denotes TNF-α
T3720 199-204 Protein denotes IL-18
T3719 192-197 Protein denotes IL-15
T3718 186-190 Protein denotes IL-6
T3717 180-184 Protein denotes IL-1
T3716 92-104 Protein denotes interferon-γ
T3715 83-87 Protein denotes IL-2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T4610 209-214 Protein denotes TNF-α
T4609 199-204 Protein denotes IL-18
T4608 192-197 Protein denotes IL-15
T4607 186-190 Protein denotes IL-6
T4606 180-184 Protein denotes IL-1
T4605 92-104 Protein denotes interferon-γ
T4604 83-87 Protein denotes IL-2

biosemtest

Id Subject Object Predicate Lexical cue
T2745 151-161 UMLS/C0016030 denotes broblast c
T2737 58-65 UMLS/C2348040 denotes erived
T2735 114-120 UMLS/C0444497 denotes ints o
T2726 9-15 UMLS/C2348044 denotes eries
T2720 19-26 UMLS/C1705923 denotes tudies
T2687 172-181 UMLS/C0332257 denotes cluding I
T2683 58-65 UMLS/C1441547 denotes erived
T2677 136-146 UMLS/C0024432 denotes crophage a
T2648 151-161 UMLS/C1546634 denotes broblast c
T2645 172-181 UMLS/C2700399 denotes cluding I
T2594 114-120 UMLS/C1706309 denotes ints o
T2588 136-146 UMLS/C1550652 denotes crophage a
T2583 172-181 UMLS/C1552866 denotes cluding I
T2576 151-161 UMLS/C1550637 denotes broblast c
T2562 84-88 UMLS/C1522405 denotes L-2
T2551 19-26 UMLS/C0557651 denotes tudies
T2538 51-57 UMLS/C0039194 denotes cell-
T2485 194-199 UMLS/C0254610 denotes -15,
T2482 188-192 UMLS/C1149241 denotes -6,
T2471 84-88 UMLS/C0879590 denotes L-2
T2468 58-65 UMLS/C1711343 denotes erived
T2454 19-26 UMLS/C0008972 denotes tudies
T2449 19-26 UMLS/C0008976 denotes tudies
T2443 194-199 UMLS/C1334105 denotes -15,
T2439 188-192 UMLS/C1527132 denotes -6,
T2436 201-206 UMLS/C1334109 denotes -18 a
T2434 136-146 UMLS/C1546706 denotes crophage a
T2432 9-15 UMLS/C0205549 denotes eries
T2431 201-206 UMLS/C1527127 denotes -18 a
T2422 19-26 UMLS/C2603343 denotes tudies
T2414 162-171 UMLS/C1524094 denotes tokines i
T2413 66-75 UMLS/C1524094 denotes ytokines
T2407 19-26 UMLS/C2349977 denotes tudies
T2399 188-192 UMLS/C0021760 denotes -6,
T2383 188-192 UMLS/C1334122 denotes -6,
T2379 182-186 UMLS/C0021755 denotes -1,
T2377 182-186 UMLS/C0021753 denotes -1,
T2376 84-88 UMLS/C0021756 denotes L-2
T2331 114-120 UMLS/C0392905 denotes ints o
T2327 114-120 UMLS/C1269611 denotes ints o
T2301 19-26 UMLS/C1880229 denotes tudies
T2293 201-206 UMLS/C0383327 denotes -18 a
T2513 182-186 UMLS/C1522428 denotes -1,
T2510 114-120 UMLS/C0022417 denotes ints o
T2502 182-186 UMLS/C1149212 denotes -1,
T2497 194-199 UMLS/C1149222 denotes -15,
T2491 201-206 UMLS/C1149225 denotes -18 a
T2490 84-88 UMLS/C1149229 denotes L-2
T2269 223-231 UMLS/C2346714 denotes ndant in
T2255 19-26 UMLS/C0947630 denotes tudies
T2244 162-171 UMLS/C0079189 denotes tokines i
T2243 66-75 UMLS/C0079189 denotes ytokines

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T3054 232-242 JJ denotes rheumatoid
T3053 229-231 IN denotes in
T3052 220-228 JJ denotes abundant
T3051 215-219 VB denotes were
T3050 209-214 NN denotes TNF-α
T3049 205-208 CC denotes and
T3048 199-204 NN denotes IL-18
T3047 197-198 -COMMA- denotes ,
T3046 192-197 NN denotes IL-15
T3045 190-191 -COMMA- denotes ,
T3044 186-190 NN denotes IL-6
T3043 184-185 -COMMA- denotes ,
T3022 50-51 NN denotes T
T3021 47-49 IN denotes of
T3020 39-46 NN denotes paucity
T3019 26-38 VB denotes demonstrated
T3018 18-25 NN denotes studies
T3017 15-17 IN denotes of
T3016 8-14 NN denotes series
T3015 6-7 DT denotes a
T3014 4-5 -COMMA- denotes ,
T3042 180-184 NN denotes IL-1
T3041 170-179 VB denotes including
T3040 160-169 NN denotes cytokines
T3039 149-159 NN denotes fibroblast
T3038 145-148 CC denotes and
T3037 134-144 NN denotes macrophage
T3036 126-133 IN denotes whereas
T3035 124-125 -COMMA- denotes ,
T3034 122-124 NN denotes RA
T3033 119-121 IN denotes of
T3032 112-118 NN denotes joints
T3031 108-111 DT denotes the
T3030 105-107 IN denotes in
T3029 92-104 NN denotes interferon-γ
T3028 88-91 CC denotes and
T3027 83-87 NN denotes IL-2
T3026 80-82 IN denotes as
T3025 75-79 JJ denotes such
T3024 65-74 NN denotes cytokines
T3023 52-64 JJ denotes cell-derived
R1273 T3016 T3015 arg1Of series,a
R1274 T3016 T3017 arg1Of series,of
R1275 T3016 T3019 arg1Of series,demonstrated
R1276 T3018 T3017 arg2Of studies,of
R1278 T3019 T3014 arg1Of demonstrated,","
R1279 T3019 T3035 arg1Of demonstrated,","
R1280 T3019 T3036 arg1Of demonstrated,whereas
R1281 T3020 T3019 arg2Of paucity,demonstrated
R1282 T3020 T3021 arg1Of paucity,of
R1283 T3024 T3021 arg2Of cytokines,of
R1284 T3024 T3022 arg1Of cytokines,T
R1285 T3024 T3023 arg1Of cytokines,cell-derived
R1286 T3024 T3026 arg1Of cytokines,as
R1287 T3026 T3025 arg1Of as,such
R1288 T3027 T3028 arg1Of IL-2,and
R1289 T3028 T3026 arg2Of and,as
R1290 T3028 T3030 arg1Of and,in
R1291 T3029 T3028 arg2Of interferon-γ,and
R1292 T3032 T3030 arg2Of joints,in
R1293 T3032 T3031 arg1Of joints,the
R1294 T3032 T3033 arg1Of joints,of
R1295 T3034 T3033 arg2Of RA,of
R1296 T3037 T3038 arg1Of macrophage,and
R1297 T3039 T3038 arg2Of fibroblast,and
R1298 T3040 T3037 arg1Of cytokines,macrophage
R1299 T3040 T3039 arg1Of cytokines,fibroblast
R1300 T3040 T3041 arg1Of cytokines,including
R1301 T3040 T3051 arg1Of cytokines,were
R1302 T3040 T3052 arg1Of cytokines,abundant
R1303 T3042 T3043 arg1Of IL-1,","
R1304 T3043 T3045 arg1Of ",",","
R1305 T3044 T3043 arg2Of IL-6,","
R1306 T3045 T3047 arg1Of ",",","
R1307 T3046 T3045 arg2Of IL-15,","
R1308 T3047 T3049 arg1Of ",",and
R1309 T3048 T3047 arg2Of IL-18,","
R1310 T3049 T3041 arg2Of and,including
R1311 T3050 T3049 arg2Of TNF-α,and
R1312 T3051 T3036 arg2Of were,whereas
R1313 T3051 T3053 arg1Of were,in
R1314 T3052 T3051 arg2Of abundant,were

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T3466 83-87 Antecedent denotes IL-2
T3465 50-74 Anaphor denotes T cell-derived cytokines
T3472 209-214 Antecedent denotes TNF-α
T3471 199-204 Antecedent denotes IL-18
T3470 186-190 Antecedent denotes IL-6
T3469 180-184 Antecedent denotes IL-1
T3468 134-169 Anaphor denotes macrophage and fibroblast cytokines
T3467 92-104 Antecedent denotes interferon-γ
R1731 T3465 T3466 boundBy T cell-derived cytokines,IL-2
R1732 T3465 T3467 boundBy T cell-derived cytokines,interferon-γ
R1736 T3468 T3469 boundBy macrophage and fibroblast cytokines,IL-1
R1737 T3468 T3470 boundBy macrophage and fibroblast cytokines,IL-6
R1738 T3468 T3471 boundBy macrophage and fibroblast cytokines,IL-18
R1739 T3468 T3472 boundBy macrophage and fibroblast cytokines,TNF-α

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T3484 83-87 Protein denotes IL-2
T3490 209-214 Protein denotes TNF-α
T3489 199-204 Protein denotes IL-18
T3488 192-197 Protein denotes IL-15
T3487 186-190 Protein denotes IL-6
T3486 180-184 Protein denotes IL-1
T3485 92-104 Protein denotes interferon-γ

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T3696 192-197 http://www.uniprot.org/uniprot/P40933 denotes IL-15
T3693 186-190 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T3692 92-104 http://www.uniprot.org/uniprot/P01579 denotes interferon-γ
T3691 83-87 http://www.uniprot.org/uniprot/P60568 denotes IL-2
T3689 209-214 http://www.uniprot.org/uniprot/P01375 denotes TNF-α
T3687 209-212 http://www.uniprot.org/uniprot/P01375 denotes TNF

GO-MF

Id Subject Object Predicate Lexical cue
T3525 199-204 http://purl.obolibrary.org/obo/GO_0045515 denotes IL-18
T3523 192-197 http://purl.obolibrary.org/obo/GO_0016170 denotes IL-15
T3520 186-190 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T3519 92-104 http://purl.obolibrary.org/obo/GO_0005133 denotes interferon-γ
T3518 83-87 http://purl.obolibrary.org/obo/GO_0005134 denotes IL-2
T3516 180-184 http://purl.obolibrary.org/obo/GO_0005149 denotes IL-1

simple1

Id Subject Object Predicate Lexical cue
T3661 209-214 Protein denotes TNF-α
T3660 199-204 Protein denotes IL-18
T3659 192-197 Protein denotes IL-15
T3658 186-190 Protein denotes IL-6
T3657 180-184 Protein denotes IL-1
T3656 92-104 Protein denotes interferon-γ
T3655 83-87 Protein denotes IL-2

DLUT931

Id Subject Object Predicate Lexical cue
T3770 209-214 Protein denotes TNF-α
T3769 199-204 Protein denotes IL-18
T3768 192-197 Protein denotes IL-15
T3767 186-190 Protein denotes IL-6
T3766 180-184 Protein denotes IL-1
T3765 92-104 Protein denotes interferon-γ
T3764 83-87 Protein denotes IL-2

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T4502 134-144 Entity denotes macrophage
T4501 209-214 Protein denotes TNF-α
T4499 92-125 Protein denotes interferon-γ in the joints of RA,
T4594 92-125 Localization denotes interferon-γ in the joints of RA,
T4593 134-215 Localization denotes macrophage and fibroblast cytokines including IL-1, IL-6, IL-15, IL-18 and TNF-α
T4591 50-82 Gene_expression denotes T cell-derived cytokines such as
T4573 199-204 Protein denotes IL-18
T4572 186-190 Protein denotes IL-6
T4571 180-184 Protein denotes IL-1
T4549 192-197 Protein denotes IL-15
T4546 50-87 Protein denotes T cell-derived cytokines such as IL-2
T4538 50-82 Protein denotes T cell-derived cytokines such as
T4536 119-124 Protein denotes of RA
T4534 149-159 Entity denotes fibroblast
T4533 134-214 Protein denotes macrophage and fibroblast cytokines including IL-1, IL-6, IL-15, IL-18 and TNF-α
T4531 50-64 Entity denotes T cell-derived
R2445 T4499 T4594 themeOf "interferon-γ in the joints of RA,","interferon-γ in the joints of RA,"
R2447 T4502 T4593 locationOf macrophage,"macrophage and fibroblast cytokines including IL-1, IL-6, IL-15, IL-18 and TNF-α "
R2457 T4533 T4593 themeOf "macrophage and fibroblast cytokines including IL-1, IL-6, IL-15, IL-18 and TNF-α","macrophage and fibroblast cytokines including IL-1, IL-6, IL-15, IL-18 and TNF-α "
R2460 T4534 T4593 locationOf fibroblast,"macrophage and fibroblast cytokines including IL-1, IL-6, IL-15, IL-18 and TNF-α "
R2461 T4538 T4591 themeOf T cell-derived cytokines such as,T cell-derived cytokines such as

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T4018 232-242 JJ denotes rheumatoid
T4017 229-231 IN denotes in
T4016 220-228 JJ denotes abundant
T4015 215-219 VBD denotes were
T4014 209-214 NNP denotes TNF-α
T4013 205-208 CC denotes and
T4012 199-204 NNP denotes IL-18
T4011 197-198 , denotes ,
T4010 192-197 NNP denotes IL-15
T4009 190-191 , denotes ,
T4008 186-190 NNP denotes IL-6
T4007 184-185 , denotes ,
T4006 180-184 NNP denotes IL-1
T4005 170-179 VBG denotes including
T4004 160-169 NNS denotes cytokines
T4003 149-159 NN denotes fibroblast
T4002 145-148 CC denotes and
T4001 134-144 NN denotes macrophage
T4000 126-133 IN denotes whereas
T3999 124-125 , denotes ,
T3998 122-124 NNP denotes RA
T3997 119-121 IN denotes of
T3996 112-118 NNS denotes joints
T3995 108-111 DT denotes the
T3994 105-107 IN denotes in
T3993 92-104 NN denotes interferon-γ
T3992 88-91 CC denotes and
T3991 83-87 NN denotes IL-2
T3990 80-82 IN denotes as
T3989 75-79 JJ denotes such
T3988 65-74 NNS denotes cytokines
T3987 52-64 JJ denotes cell-derived
T3986 50-51 NNP denotes T
T3985 47-49 IN denotes of
T3984 39-46 NN denotes paucity
T3983 26-38 VBD denotes demonstrated
T3982 18-25 NNS denotes studies
T3981 15-17 IN denotes of
T3980 8-14 NN denotes series
T3979 6-7 DT denotes a
T3978 4-5 , denotes ,
R1893 T3978 T3983 punct ",",demonstrated
R1895 T3979 T3980 det a,series
R1896 T3980 T3983 nsubj series,demonstrated
R1897 T3981 T3980 prep of,series
R1899 T3982 T3981 pobj studies,of
R1900 T3983 T3983 ROOT demonstrated,demonstrated
R1902 T3984 T3983 dobj paucity,demonstrated
R1903 T3985 T3984 prep of,paucity
R1904 T3986 T3988 nmod T,cytokines
R1906 T3987 T3988 amod cell-derived,cytokines
R1907 T3988 T3985 pobj cytokines,of
R1908 T3989 T3990 amod such,as
R1910 T3990 T3988 prep as,cytokines
R1911 T3991 T3990 pobj IL-2,as
R1912 T3992 T3991 cc and,IL-2
R1914 T3993 T3991 conj interferon-γ,IL-2
R1915 T3994 T3983 prep in,demonstrated
R1916 T3995 T3996 det the,joints
R1917 T3996 T3994 pobj joints,in
R1919 T3997 T3996 prep of,joints
R1920 T3998 T3997 pobj RA,of
R1921 T3999 T3983 punct ",",demonstrated
R1924 T4000 T4015 mark whereas,were
R1926 T4001 T4015 nsubj macrophage,were
R1927 T4002 T4001 cc and,macrophage
R1928 T4003 T4001 conj fibroblast,macrophage
R1930 T4004 T4001 conj cytokines,macrophage
R1931 T4005 T4004 prep including,cytokines
R1932 T4006 T4005 pobj IL-1,including
R1933 T4007 T4006 punct ",",IL-1
R1935 T4008 T4006 conj IL-6,IL-1
R1936 T4009 T4008 punct ",",IL-6
R1937 T4010 T4008 conj IL-15,IL-6
R1938 T4011 T4010 punct ",",IL-15
R1940 T4012 T4010 conj IL-18,IL-15
R1941 T4013 T4012 cc and,IL-18
R1943 T4014 T4012 conj TNF-α,IL-18
R1944 T4015 T3983 advcl were,demonstrated
R1945 T4016 T4015 acomp abundant,were
R1946 T4017 T4016 prep in,abundant

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T3618 220-228 Gene_expression denotes abundant
T3617 220-228 Gene_expression denotes abundant
T3616 220-228 Gene_expression denotes abundant
T3615 220-228 Gene_expression denotes abundant
T3614 220-228 Gene_expression denotes abundant
T3613 220-228 Gene_expression denotes abundant
T3611 209-214 Protein denotes TNF-α
T3610 199-204 Protein denotes IL-18
T3609 192-197 Protein denotes IL-15
T3608 186-190 Protein denotes IL-6
T3607 180-184 Protein denotes IL-1
T3606 92-104 Protein denotes interferon-γ
T3605 83-87 Protein denotes IL-2
R1754 T3607 T3613 themeOf IL-1,abundant
R1757 T3608 T3614 themeOf IL-6,abundant
R1758 T3609 T3615 themeOf IL-15,abundant
R1759 T3610 T3616 themeOf IL-18,abundant
R1760 T3611 T3617 themeOf TNF-α,abundant

testone

Id Subject Object Predicate Lexical cue
T2115 209-214 Protein denotes TNF-α
T2114 199-204 Protein denotes IL-18
T2113 192-197 Protein denotes IL-15
T2112 186-190 Protein denotes IL-6
T2111 180-184 Protein denotes IL-1
T2110 92-104 Protein denotes interferon-γ
T2109 83-87 Protein denotes IL-2