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PMC:1064895 / 20358-20555 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T14747 82-85 Protein denotes Akt
T14746 24-29 Protein denotes IL-15
T14745 0-3 Protein denotes PHA
T14766 123-133 Negative_regulation denotes inhibition
T14765 82-85 Protein denotes Akt
T14764 67-81 Phosphorylation denotes phosphorylated
T14763 57-63 Regulation denotes effect
T14762 24-29 Protein denotes IL-15
T14761 0-3 Protein denotes PHA
R8147 T14761 T14763 causeOf PHA,effect
R8148 T14762 T14763 causeOf IL-15,effect
R8149 T14764 T14763 themeOf phosphorylated,effect
R8150 T14765 T14764 themeOf Akt,phosphorylated

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T15210 67-81 Phosphorylation denotes phosphorylated
T15201 24-29 Protein denotes IL-15
T15200 0-3 Protein denotes PHA
T15199 82-85 Protein denotes Akt
R8336 T15199 T15210 themeOf Akt,phosphorylated

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T15469 57-63 Negative_regulation denotes effect
T15468 67-81 Phosphorylation denotes phosphorylated
T15459 24-29 Protein denotes IL-15
T15458 0-3 Protein denotes PHA
T15457 82-85 Protein denotes Akt
R8539 T15457 T15469 themeOf Akt,effect
R8540 T15457 T15468 themeOf Akt,phosphorylated

biosemtest

Id Subject Object Predicate Lexical cue
T14924 29-34 UMLS/C1149222 denotes also
T14921 5-8 UMLS/C0030779 denotes con
T14912 29-34 UMLS/C0254610 denotes also
T14907 62-68 UMLS/C2348382 denotes t on p
T14890 191-194 UMLS/C1518422 denotes how
T14887 5-8 UMLS/C0031858 denotes con
T14884 29-34 UMLS/C1334105 denotes also
T14883 62-68 UMLS/C1280500 denotes t on p
T14865 128-138 UMLS/C1628982 denotes ition by w
T14861 176-184 UMLS/C0251991 denotes 002 (dat
T14857 57-61 UMLS/C1692345 denotes effe
T14854 157-161 UMLS/C0084183 denotes as w
T14844 186-190 UMLS/C1511726 denotes not
T14829 142-152 UMLS/C0078517 denotes annin and
T14819 128-138 UMLS/C0021467 denotes ition by w
T14817 128-138 UMLS/C0021469 denotes ition by w
T14811 10-24 UMLS/C0009630 denotes navalin A and
T14802 87-90 UP/Q8INB9 denotes s s
T14787 165-169 UMLS/C0205170 denotes as b
T14767 57-61 UMLS/C0445247 denotes effe

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T15122 195-196 -RRB- denotes )
T15121 190-195 VB denotes shown
T15120 186-189 RB denotes not
T15119 181-185 NN denotes data
T15118 180-181 -LRB- denotes (
T15117 171-179 NN denotes LY294002
T15116 168-170 IN denotes by
T15115 165-167 IN denotes as
T15114 160-164 RB denotes well
T15113 157-159 RB denotes as
T15112 152-156 NN denotes PDTC
T15111 148-151 CC denotes and
T15110 137-147 NN denotes wortmannin
T15109 134-136 IN denotes by
T15108 123-133 NN denotes inhibition
T15107 120-122 DT denotes an
T15106 116-119 VB denotes was
T15105 110-115 WDT denotes which
T15104 108-109 -COMMA- denotes ,
T15103 100-108 NN denotes anti-CD3
T15102 95-99 IN denotes with
T15101 89-94 VB denotes shown
T15100 86-88 IN denotes as
T15099 82-85 NN denotes Akt
T15098 67-81 VB denotes phosphorylated
T15097 64-66 IN denotes on
T15096 57-63 NN denotes effect
T15095 52-56 JJ denotes same
T15094 48-51 DT denotes the
T15093 35-47 VB denotes demonstrated
T15092 30-34 RB denotes also
T15091 24-29 NN denotes IL-15
T15090 20-23 CC denotes and
T15089 18-19 NN denotes A
T15088 5-17 NN denotes concanavalin
T15087 3-4 -COMMA- denotes ,
T15086 0-3 NN denotes PHA
R8285 T15086 T15087 arg1Of PHA,","
R8286 T15087 T15090 arg1Of ",",and
R8287 T15089 T15087 arg2Of A,","
R8288 T15089 T15088 arg1Of A,concanavalin
R8289 T15090 T15093 arg1Of and,demonstrated
R8290 T15091 T15090 arg2Of IL-15,and
R8291 T15093 T15092 arg1Of demonstrated,also
R8292 T15093 T15097 arg1Of demonstrated,on
R8293 T15093 T15100 arg1Of demonstrated,as
R8294 T15093 T15104 arg1Of demonstrated,","
R8295 T15093 T15105 arg1Of demonstrated,which
R8296 T15093 T15106 arg1Of demonstrated,was
R8297 T15096 T15093 arg2Of effect,demonstrated
R8298 T15096 T15094 arg1Of effect,the
R8299 T15096 T15095 arg1Of effect,same
R8300 T15099 T15097 arg2Of Akt,on
R8301 T15099 T15098 arg2Of Akt,phosphorylated
R8302 T15101 T15100 arg2Of shown,as
R8303 T15101 T15102 arg1Of shown,with
R8304 T15103 T15102 arg2Of anti-CD3,with
R8305 T15106 T15109 arg1Of was,by
R8306 T15106 T15116 arg1Of was,by
R8307 T15108 T15106 arg2Of inhibition,was
R8308 T15108 T15107 arg1Of inhibition,an
R8309 T15109 T15115 arg1Of by,as
R8310 T15110 T15111 arg1Of wortmannin,and
R8311 T15111 T15109 arg2Of and,by
R8312 T15112 T15111 arg2Of PDTC,and
R8313 T15115 T15113 arg1Of as,as
R8314 T15115 T15114 arg1Of as,well
R8315 T15116 T15115 arg2Of by,as
R8316 T15117 T15116 arg2Of LY294002,by
R8317 T15117 T15118 arg1Of LY294002,(
R8318 T15119 T15118 arg2Of data,(
R8319 T15119 T15121 arg2Of data,shown
R8320 T15121 T15120 arg1Of shown,not
R8321 T15122 T15118 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T15132 82-85 Protein denotes Akt
T15131 24-29 Protein denotes IL-15
T15130 0-3 Protein denotes PHA

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T15191 24-29 http://www.uniprot.org/uniprot/P40933 denotes IL-15
T15189 105-108 http://www.uniprot.org/uniprot/P09693 denotes CD3
T15186 105-108 http://www.uniprot.org/uniprot/P07766 denotes CD3
T15183 105-108 http://www.uniprot.org/uniprot/P04234 denotes CD3
T15180 105-108 http://www.uniprot.org/uniprot/P20963 denotes CD3

GO-MF

Id Subject Object Predicate Lexical cue
T15136 24-29 http://purl.obolibrary.org/obo/GO_0016170 denotes IL-15

sentences

Id Subject Object Predicate Lexical cue
T14933 0-197 Sentence denotes PHA, concanavalin A and IL-15 also demonstrated the same effect on phosphorylated Akt as shown with anti-CD3, which was an inhibition by wortmannin and PDTC as well as by LY294002 (data not shown).
T146 0-197 Sentence denotes PHA, concanavalin A and IL-15 also demonstrated the same effect on phosphorylated Akt as shown with anti-CD3, which was an inhibition by wortmannin and PDTC as well as by LY294002 (data not shown).

simple1

Id Subject Object Predicate Lexical cue
T15176 82-85 Protein denotes Akt
T15175 24-29 Protein denotes IL-15
T15174 0-3 Protein denotes PHA

DLUT931

Id Subject Object Predicate Lexical cue
T15230 57-63 Regulation denotes effect
T15229 67-81 Phosphorylation denotes phosphorylated
T15220 24-29 Protein denotes IL-15
T15219 0-3 Protein denotes PHA
T15218 82-85 Protein denotes Akt
R8348 T15218 T15229 themeOf Akt,phosphorylated
R8349 T15219 T15230 causeOf PHA,effect
R8350 T15220 T15230 causeOf IL-15,effect
R8354 T15229 T15230 themeOf phosphorylated,effect
R8355 T15229 T15230 themeOf phosphorylated,effect

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T15436 100-109 Protein denotes anti-CD3,
T15430 0-3 Protein denotes PHA
T15447 64-85 Phosphorylation denotes on phosphorylated Akt
T15445 171-196 Entity denotes LY294002 (data not shown)
T15443 137-147 Entity denotes wortmannin
T15441 64-85 Protein denotes on phosphorylated Akt
T15438 24-29 Protein denotes IL-15
T15437 5-19 Protein denotes concanavalin A
T15448 0-109 Regulation denotes PHA, concanavalin A and IL-15 also demonstrated the same effect on phosphorylated Akt as shown with anti-CD3,
R8529 T15441 T15447 themeOf on phosphorylated Akt,on phosphorylated Akt
R8530 T15441 T15448 themeOf on phosphorylated Akt,"PHA, concanavalin A and IL-15 also demonstrated the same effect on phosphorylated Akt as shown with anti-CD3,"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T15404 196-197 . denotes .
T15403 195-196 -RRB- denotes )
T15402 190-195 VBN denotes shown
T15401 186-189 RB denotes not
T15400 181-185 NNS denotes data
T15399 180-181 -LRB- denotes (
T15398 171-179 NNP denotes LY294002
T15397 168-170 IN denotes by
T15396 165-167 IN denotes as
T15395 160-164 RB denotes well
T15394 157-159 RB denotes as
T15393 152-156 NNP denotes PDTC
T15392 148-151 CC denotes and
T15391 137-147 NN denotes wortmannin
T15390 134-136 IN denotes by
T15389 123-133 NN denotes inhibition
T15388 120-122 DT denotes an
T15387 116-119 VBD denotes was
T15386 110-115 WDT denotes which
T15385 108-109 , denotes ,
T15384 100-108 JJ denotes anti-CD3
T15383 95-99 IN denotes with
T15382 89-94 VBN denotes shown
T15381 86-88 IN denotes as
T15380 82-85 NNP denotes Akt
T15379 67-81 VBN denotes phosphorylated
T15378 64-66 IN denotes on
T15377 57-63 NN denotes effect
T15376 52-56 JJ denotes same
T15375 48-51 DT denotes the
T15374 35-47 VBD denotes demonstrated
T15373 30-34 RB denotes also
T15372 24-29 NNP denotes IL-15
T15371 20-23 CC denotes and
T15370 18-19 DT denotes A
T15369 5-17 NN denotes concanavalin
T15368 3-4 , denotes ,
T15367 0-3 NNP denotes PHA
R8491 T15376 T15377 amod same,effect
R8492 T15377 T15374 dobj effect,demonstrated
R8493 T15378 T15377 prep on,effect
R8494 T15379 T15380 compound phosphorylated,Akt
R8495 T15380 T15378 pobj Akt,on
R8496 T15381 T15382 mark as,shown
R8497 T15382 T15374 advcl shown,demonstrated
R8498 T15383 T15382 prep with,shown
R8499 T15384 T15383 pobj anti-CD3,with
R8500 T15385 T15384 punct ",",anti-CD3
R8501 T15386 T15387 nsubj which,was
R8502 T15387 T15374 ccomp was,demonstrated
R8503 T15388 T15389 det an,inhibition
R8504 T15389 T15387 attr inhibition,was
R8505 T15390 T15389 prep by,inhibition
R8506 T15391 T15390 pobj wortmannin,by
R8507 T15392 T15391 cc and,wortmannin
R8508 T15393 T15391 conj PDTC,wortmannin
R8509 T15394 T15396 advmod as,as
R8510 T15395 T15396 advmod well,as
R8511 T15396 T15390 cc as,by
R8512 T15397 T15390 conj by,by
R8513 T15398 T15397 pobj LY294002,by
R8514 T15399 T15402 punct (,shown
R8515 T15400 T15402 nsubjpass data,shown
R8516 T15401 T15402 neg not,shown
R8517 T15402 T15387 parataxis shown,was
R8518 T15403 T15402 punct ),shown
R8519 T15404 T15374 punct .,demonstrated
R8482 T15367 T15374 nsubj PHA,demonstrated
R8483 T15368 T15367 punct ",",PHA
R8484 T15369 T15370 compound concanavalin,A
R8485 T15370 T15367 conj A,PHA
R8486 T15371 T15370 cc and,A
R8487 T15372 T15374 nsubj IL-15,demonstrated
R8488 T15373 T15374 advmod also,demonstrated
R8489 T15374 T15374 ROOT demonstrated,demonstrated
R8490 T15375 T15377 det the,effect

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T15166 67-81 Phosphorylation denotes phosphorylated
T15165 105-108 Protein denotes CD3
T15164 82-85 Protein denotes Akt
T15163 24-29 Protein denotes IL-15
T15162 5-19 Protein denotes concanavalin A
T15161 0-3 Protein denotes PHA
R8329 T15164 T15166 themeOf Akt,phosphorylated

testone

Id Subject Object Predicate Lexical cue
T14737 123-133 Negative_regulation denotes inhibition
T14736 67-81 Phosphorylation denotes phosphorylated
T14735 57-63 Regulation denotes effect
T14727 82-85 Protein denotes Akt
T14726 24-29 Protein denotes IL-15
T14725 0-3 Protein denotes PHA
R8138 T14725 T14735 causeOf PHA,effect
R8139 T14726 T14735 causeOf IL-15,effect
R8140 T14727 T14736 themeOf Akt,phosphorylated
R8141 T14736 T14735 themeOf phosphorylated,effect