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PMC:1064895 / 19929-20083 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T14741 137-140 Protein denotes Akt
T14754 137-140 Protein denotes Akt
T14753 122-136 Phosphorylation denotes phosphorylated
R8144 T14754 T14753 themeOf Akt,phosphorylated

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T15206 93-103 Regulation denotes difference
T15205 122-136 Phosphorylation denotes phosphorylated
T15195 137-140 Protein denotes Akt
R8332 T15195 T15205 themeOf Akt,phosphorylated
R8338 T15205 T15206 themeOf phosphorylated,difference

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T15463 122-136 Phosphorylation denotes phosphorylated
T15453 137-140 Protein denotes Akt
R8533 T15453 T15463 themeOf Akt,phosphorylated

biosemtest

Id Subject Object Predicate Lexical cue
T14911 113-120 UMLS/C1265611 denotes ounts o
T14859 73-81 UMLS/C0251991 denotes Y294002
T14837 33-43 UMLS/C1980044 denotes incubation
T14831 113-120 UMLS/C1561574 denotes ounts o
T14798 95-105 UMLS/C1705242 denotes fference i
T14796 95-105 UMLS/C1705241 denotes fference i
T14784 139-142 UP/Q8INB9 denotes t w
T14779 33-43 UMLS/C1979572 denotes incubation
T14778 12-15 UMLS/C0349966 denotes Fig
T14770 23-29 UMLS/C0456692 denotes 10 min

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T15034 145-153 VB denotes observed
T15033 141-144 VB denotes was
T15032 137-140 NN denotes Akt
T15031 122-136 VB denotes phosphorylated
T15030 119-121 IN denotes of
T15029 111-118 NN denotes amounts
T15028 107-110 DT denotes the
T15027 104-106 IN denotes in
T15026 93-103 NN denotes difference
T15025 90-92 DT denotes no
T15024 88-89 -COMMA- denotes ,
T15023 87-88 -RRB- denotes )
T15022 85-87 NN denotes μM
T15021 82-84 CD denotes 20
T15020 81-82 -LRB- denotes (
T15019 72-80 NN denotes LY294002
T15018 69-71 CC denotes or
T15017 67-68 -RRB- denotes )
T15016 62-67 NN denotes μg/ml
T15015 59-61 CD denotes 10
T15014 58-59 -LRB- denotes (
T15013 49-57 NN denotes anti-CD3
T15012 44-48 IN denotes with
T15011 33-43 NN denotes incubation
T15010 30-32 IN denotes of
T15009 26-29 NN denotes min
T15008 23-25 CD denotes 10
T15007 20-22 IN denotes at
T15006 18-19 -COMMA- denotes ,
T15005 17-18 CD denotes 6
T15004 12-16 NNP denotes Fig.
T15003 9-11 IN denotes in
T15002 3-8 VB denotes shown
T15001 0-2 IN denotes As
R8200 T15002 T15001 arg2Of shown,As
R8201 T15002 T15003 arg1Of shown,in
R8202 T15002 T15006 arg1Of shown,","
R8203 T15002 T15007 arg1Of shown,at
R8204 T15004 T15003 arg2Of Fig.,in
R8205 T15004 T15005 arg1Of Fig.,6
R8206 T15009 T15007 arg2Of min,at
R8207 T15009 T15008 arg1Of min,10
R8208 T15009 T15010 arg1Of min,of
R8209 T15009 T15012 arg1Of min,with
R8210 T15011 T15010 arg2Of incubation,of
R8211 T15013 T15014 arg1Of anti-CD3,(
R8212 T15013 T15018 arg1Of anti-CD3,or
R8213 T15016 T15014 arg2Of μg/ml,(
R8214 T15016 T15015 arg1Of μg/ml,10
R8215 T15017 T15014 arg3Of ),(
R8216 T15018 T15012 arg2Of or,with
R8217 T15019 T15018 arg2Of LY294002,or
R8218 T15019 T15020 arg1Of LY294002,(
R8219 T15022 T15020 arg2Of μM,(
R8220 T15022 T15021 arg1Of μM,20
R8221 T15023 T15020 arg3Of ),(
R8222 T15026 T15025 arg1Of difference,no
R8223 T15026 T15027 arg1Of difference,in
R8224 T15026 T15033 arg1Of difference,was
R8225 T15026 T15034 arg2Of difference,observed
R8226 T15029 T15027 arg2Of amounts,in
R8227 T15029 T15028 arg1Of amounts,the
R8228 T15029 T15030 arg1Of amounts,of
R8229 T15032 T15030 arg2Of Akt,of
R8230 T15032 T15031 arg2Of Akt,phosphorylated
R8231 T15034 T15001 arg1Of observed,As
R8232 T15034 T15024 arg1Of observed,","
R8233 T15034 T15033 arg2Of observed,was

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T15126 137-140 Protein denotes Akt

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T15188 54-57 http://www.uniprot.org/uniprot/P09693 denotes CD3
T15185 54-57 http://www.uniprot.org/uniprot/P07766 denotes CD3
T15182 54-57 http://www.uniprot.org/uniprot/P04234 denotes CD3
T15179 54-57 http://www.uniprot.org/uniprot/P20963 denotes CD3

sentences

Id Subject Object Predicate Lexical cue
T14930 0-154 Sentence denotes As shown in Fig. 6, at 10 min of incubation with anti-CD3 (10 μg/ml) or LY294002 (20 μM), no difference in the amounts of phosphorylated Akt was observed.
T143 0-154 Sentence denotes As shown in Fig. 6, at 10 min of incubation with anti-CD3 (10 μg/ml) or LY294002 (20 μM), no difference in the amounts of phosphorylated Akt was observed.

simple1

Id Subject Object Predicate Lexical cue
T15170 137-140 Protein denotes Akt

DLUT931

Id Subject Object Predicate Lexical cue
T15225 122-136 Phosphorylation denotes phosphorylated
T15224 93-103 Regulation denotes difference
T15214 137-140 Protein denotes Akt
R8342 T15214 T15224 themeOf Akt,difference
R8343 T15214 T15225 themeOf Akt,phosphorylated
R8352 T15225 T15224 themeOf phosphorylated,difference

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T15432 107-140 Protein denotes the amounts of phosphorylated Akt
T15428 72-80 Entity denotes LY294002
T15444 49-68 Protein denotes anti-CD3 (10 μg/ml)

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T15312 153-154 . denotes .
T15311 145-153 VBN denotes observed
T15310 141-144 VBD denotes was
T15309 137-140 NNP denotes Akt
T15308 122-136 VBN denotes phosphorylated
T15307 119-121 IN denotes of
T15306 111-118 NNS denotes amounts
T15305 107-110 DT denotes the
T15304 104-106 IN denotes in
T15303 93-103 NN denotes difference
T15302 90-92 DT denotes no
T15301 88-89 , denotes ,
T15300 87-88 -RRB- denotes )
T15299 85-87 NNP denotes μM
T15298 82-84 CD denotes 20
T15297 81-82 -LRB- denotes (
T15296 72-80 NNP denotes LY294002
T15295 69-71 CC denotes or
T15294 67-68 -RRB- denotes )
T15293 65-67 NN denotes ml
T15292 64-65 NN denotes /
T15291 62-64 NN denotes μg
T15290 59-61 CD denotes 10
T15289 58-59 -LRB- denotes (
T15288 49-57 JJ denotes anti-CD3
T15287 44-48 IN denotes with
T15286 33-43 NN denotes incubation
T15285 30-32 IN denotes of
T15284 26-29 NN denotes min
T15283 23-25 CD denotes 10
T15282 20-22 IN denotes at
T15281 18-19 , denotes ,
T15280 17-18 CD denotes 6
T15279 12-16 NNP denotes Fig.
T15278 9-11 IN denotes in
T15277 3-8 VBN denotes shown
T15276 0-2 IN denotes As
R8391 T15276 T15277 mark As,shown
R8392 T15277 T15311 advcl shown,observed
R8393 T15278 T15277 prep in,shown
R8394 T15279 T15278 pobj Fig.,in
R8395 T15280 T15279 nummod 6,Fig.
R8396 T15281 T15279 punct ",",Fig.
R8397 T15282 T15277 prep at,shown
R8398 T15283 T15284 nummod 10,min
R8399 T15284 T15282 pobj min,at
R8400 T15285 T15284 prep of,min
R8401 T15286 T15285 pobj incubation,of
R8402 T15287 T15284 prep with,min
R8403 T15288 T15287 pobj anti-CD3,with
R8404 T15289 T15288 punct (,anti-CD3
R8405 T15290 T15291 nummod 10,μg
R8406 T15291 T15293 nmod μg,ml
R8407 T15292 T15293 compound /,ml
R8408 T15293 T15288 appos ml,anti-CD3
R8409 T15294 T15293 punct ),ml
R8410 T15295 T15288 cc or,anti-CD3
R8411 T15296 T15288 conj LY294002,anti-CD3
R8412 T15297 T15296 punct (,LY294002
R8413 T15298 T15299 nummod 20,μM
R8414 T15299 T15296 appos μM,LY294002
R8415 T15300 T15296 punct ),LY294002
R8416 T15301 T15284 punct ",",min
R8417 T15302 T15303 det no,difference
R8418 T15303 T15311 nsubjpass difference,observed
R8419 T15304 T15303 prep in,difference
R8420 T15305 T15306 det the,amounts
R8421 T15306 T15304 pobj amounts,in
R8422 T15307 T15306 prep of,amounts
R8423 T15308 T15309 compound phosphorylated,Akt
R8424 T15309 T15307 pobj Akt,of
R8425 T15310 T15311 auxpass was,observed
R8426 T15311 T15311 ROOT observed,observed
R8427 T15312 T15311 punct .,observed

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T15156 122-136 Phosphorylation denotes phosphorylated
T15155 137-140 Protein denotes Akt
T15154 12-15 Protein denotes Fig
R8326 T15155 T15156 themeOf Akt,phosphorylated

testone

Id Subject Object Predicate Lexical cue
T14731 122-136 Phosphorylation denotes phosphorylated
T14730 93-103 Regulation denotes difference
T14721 137-140 Protein denotes Akt
R8134 T14721 T14731 themeOf Akt,phosphorylated