PMC:1064895 / 19536-19724
Annnotations
test3
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BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T14596","span":{"begin":29,"end":37},"obj":"Positive_regulation"},{"id":"T14595","span":{"begin":52,"end":63},"obj":"Transcription"},{"id":"T14590","span":{"begin":41,"end":46},"obj":"Protein"}],"relations":[{"id":"R8043","pred":"themeOf","subj":"T14590","obj":"T14596"},{"id":"R8044","pred":"themeOf","subj":"T14590","obj":"T14595"}],"text":"We observed a dose-dependent increase in IL-17 mRNA transcripts after stimulation with anti-CD3; this was inhibited by the PI3K inhibitor LY294002 and by the NF-κB inhibitor PDTC (Fig. 5)."}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T14704","span":{"begin":29,"end":37},"obj":"Positive_regulation"},{"id":"T14703","span":{"begin":52,"end":63},"obj":"Transcription"},{"id":"T14698","span":{"begin":41,"end":46},"obj":"Protein"}],"relations":[{"id":"R8127","pred":"themeOf","subj":"T14698","obj":"T14704"},{"id":"R8128","pred":"themeOf","subj":"T14698","obj":"T14703"},{"id":"R8131","pred":"themeOf","subj":"T14703","obj":"T14704"}],"text":"We observed a dose-dependent increase in IL-17 mRNA transcripts after stimulation with anti-CD3; this was inhibited by the PI3K inhibitor LY294002 and by the NF-κB inhibitor PDTC (Fig. 5)."}
biosemtest
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pmc-enju-pas
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bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T14567","span":{"begin":41,"end":46},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"We observed a dose-dependent increase in IL-17 mRNA transcripts after stimulation with anti-CD3; this was inhibited by the PI3K inhibitor LY294002 and by the NF-κB inhibitor PDTC (Fig. 5)."}
bionlp-st-ge-2016-uniprot
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GO-BP
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GO-MF
{"project":"GO-MF","denotations":[{"id":"T14571","span":{"begin":123,"end":127},"obj":"http://purl.obolibrary.org/obo/GO_0016303"},{"id":"T14570","span":{"begin":41,"end":46},"obj":"http://purl.obolibrary.org/obo/GO_0030367"}],"text":"We observed a dose-dependent increase in IL-17 mRNA transcripts after stimulation with anti-CD3; this was inhibited by the PI3K inhibitor LY294002 and by the NF-κB inhibitor PDTC (Fig. 5)."}
sentences
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simple1
{"project":"simple1","denotations":[{"id":"T14577","span":{"begin":41,"end":46},"obj":"Protein"}],"text":"We observed a dose-dependent increase in IL-17 mRNA transcripts after stimulation with anti-CD3; this was inhibited by the PI3K inhibitor LY294002 and by the NF-κB inhibitor PDTC (Fig. 5)."}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T14606","span":{"begin":14,"end":28},"obj":"Regulation"},{"id":"T14605","span":{"begin":29,"end":37},"obj":"Positive_regulation"},{"id":"T14604","span":{"begin":52,"end":63},"obj":"Transcription"},{"id":"T14599","span":{"begin":41,"end":46},"obj":"Protein"}],"relations":[{"id":"R8049","pred":"themeOf","subj":"T14599","obj":"T14604"},{"id":"R8052","pred":"themeOf","subj":"T14604","obj":"T14605"},{"id":"R8053","pred":"themeOf","subj":"T14605","obj":"T14606"},{"id":"R8054","pred":"themeOf","subj":"T14606","obj":"T14605"}],"text":"We observed a dose-dependent increase in IL-17 mRNA transcripts after stimulation with anti-CD3; this was inhibited by the PI3K inhibitor LY294002 and by the NF-κB inhibitor PDTC (Fig. 5)."}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T14691","span":{"begin":41,"end":46},"obj":"Protein"},{"id":"T14690","span":{"begin":180,"end":183},"obj":"Protein"},{"id":"T14689","span":{"begin":87,"end":95},"obj":"Protein"},{"id":"T14688","span":{"begin":119,"end":146},"obj":"Entity"},{"id":"T14687","span":{"begin":123,"end":127},"obj":"Protein"},{"id":"T14686","span":{"begin":38,"end":63},"obj":"Protein"},{"id":"T14685","span":{"begin":158,"end":173},"obj":"Entity"},{"id":"T14684","span":{"begin":38,"end":63},"obj":"Protein"},{"id":"T14682","span":{"begin":119,"end":146},"obj":"Entity"}],"text":"We observed a dose-dependent increase in IL-17 mRNA transcripts after stimulation with anti-CD3; this was inhibited by the PI3K inhibitor LY294002 and by the NF-κB inhibitor PDTC (Fig. 5)."}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T14674","span":{"begin":187,"end":188},"obj":"."},{"id":"T14673","span":{"begin":186,"end":187},"obj":"-RRB-"},{"id":"T14672","span":{"begin":185,"end":186},"obj":"CD"},{"id":"T14671","span":{"begin":180,"end":184},"obj":"NNP"},{"id":"T14670","span":{"begin":179,"end":180},"obj":"-LRB-"},{"id":"T14669","span":{"begin":174,"end":178},"obj":"NNP"},{"id":"T14668","span":{"begin":164,"end":173},"obj":"NN"},{"id":"T14667","span":{"begin":158,"end":163},"obj":"JJ"},{"id":"T14666","span":{"begin":154,"end":157},"obj":"DT"},{"id":"T14665","span":{"begin":151,"end":153},"obj":"IN"},{"id":"T14664","span":{"begin":147,"end":150},"obj":"CC"},{"id":"T14663","span":{"begin":138,"end":146},"obj":"NNP"},{"id":"T14662","span":{"begin":128,"end":137},"obj":"NN"},{"id":"T14661","span":{"begin":123,"end":127},"obj":"NNP"},{"id":"T14660","span":{"begin":119,"end":122},"obj":"DT"},{"id":"T14659","span":{"begin":116,"end":118},"obj":"IN"},{"id":"T14658","span":{"begin":106,"end":115},"obj":"VBN"},{"id":"T14657","span":{"begin":102,"end":105},"obj":"VBD"},{"id":"T14656","span":{"begin":97,"end":101},"obj":"DT"},{"id":"T14655","span":{"begin":95,"end":96},"obj":":"},{"id":"T14654","span":{"begin":87,"end":95},"obj":"JJ"},{"id":"T14653","span":{"begin":82,"end":86},"obj":"IN"},{"id":"T14652","span":{"begin":70,"end":81},"obj":"NN"},{"id":"T14651","span":{"begin":64,"end":69},"obj":"IN"},{"id":"T14650","span":{"begin":52,"end":63},"obj":"NNS"},{"id":"T14649","span":{"begin":47,"end":51},"obj":"NNP"},{"id":"T14648","span":{"begin":41,"end":46},"obj":"NNP"},{"id":"T14647","span":{"begin":38,"end":40},"obj":"IN"},{"id":"T14646","span":{"begin":29,"end":37},"obj":"NN"},{"id":"T14645","span":{"begin":14,"end":28},"obj":"JJ"},{"id":"T14644","span":{"begin":12,"end":13},"obj":"DT"},{"id":"T14643","span":{"begin":3,"end":11},"obj":"VBD"},{"id":"T14642","span":{"begin":0,"end":2},"obj":"PRP"}],"relations":[{"id":"R8088","pred":"nsubj","subj":"T14642","obj":"T14643"},{"id":"R8089","pred":"ROOT","subj":"T14643","obj":"T14643"},{"id":"R8090","pred":"det","subj":"T14644","obj":"T14646"},{"id":"R8091","pred":"amod","subj":"T14645","obj":"T14646"},{"id":"R8092","pred":"dobj","subj":"T14646","obj":"T14643"},{"id":"R8093","pred":"prep","subj":"T14647","obj":"T14646"},{"id":"R8094","pred":"compound","subj":"T14648","obj":"T14649"},{"id":"R8095","pred":"compound","subj":"T14649","obj":"T14650"},{"id":"R8096","pred":"pobj","subj":"T14650","obj":"T14647"},{"id":"R8097","pred":"prep","subj":"T14651","obj":"T14646"},{"id":"R8098","pred":"pobj","subj":"T14652","obj":"T14651"},{"id":"R8099","pred":"prep","subj":"T14653","obj":"T14652"},{"id":"R8100","pred":"pobj","subj":"T14654","obj":"T14653"},{"id":"R8101","pred":"punct","subj":"T14655","obj":"T14658"},{"id":"R8102","pred":"nsubjpass","subj":"T14656","obj":"T14658"},{"id":"R8103","pred":"auxpass","subj":"T14657","obj":"T14658"},{"id":"R8104","pred":"ccomp","subj":"T14658","obj":"T14643"},{"id":"R8105","pred":"agent","subj":"T14659","obj":"T14658"},{"id":"R8106","pred":"det","subj":"T14660","obj":"T14662"},{"id":"R8107","pred":"compound","subj":"T14661","obj":"T14662"},{"id":"R8108","pred":"pobj","subj":"T14662","obj":"T14659"},{"id":"R8109","pred":"appos","subj":"T14663","obj":"T14662"},{"id":"R8110","pred":"cc","subj":"T14664","obj":"T14659"},{"id":"R8111","pred":"conj","subj":"T14665","obj":"T14659"},{"id":"R8112","pred":"det","subj":"T14666","obj":"T14669"},{"id":"R8113","pred":"amod","subj":"T14667","obj":"T14669"},{"id":"R8114","pred":"compound","subj":"T14668","obj":"T14669"},{"id":"R8115","pred":"pobj","subj":"T14669","obj":"T14665"},{"id":"R8116","pred":"punct","subj":"T14670","obj":"T14671"},{"id":"R8117","pred":"appos","subj":"T14671","obj":"T14669"},{"id":"R8118","pred":"nummod","subj":"T14672","obj":"T14671"},{"id":"R8119","pred":"punct","subj":"T14673","obj":"T14669"},{"id":"R8120","pred":"punct","subj":"T14674","obj":"T14643"}],"text":"We observed a dose-dependent increase in IL-17 mRNA transcripts after stimulation with anti-CD3; this was inhibited by the PI3K inhibitor LY294002 and by the NF-κB inhibitor PDTC (Fig. 5)."}
bionlp-st-ge-2016-test-tees
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testone
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