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PMC:1064895 / 19536-19724 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T14436 128-137 Negative_regulation denotes inhibitor
T14435 106-115 Negative_regulation denotes inhibited
T14434 52-63 Transcription denotes transcripts
T14433 47-51 Transcription denotes mRNA
T14432 41-46 Protein denotes IL-17
T14431 29-37 Positive_regulation denotes increase
T14430 19-28 Regulation denotes dependent
T14423 41-46 Protein denotes IL-17
R7970 T14433 T14431 themeOf mRNA,increase
R7971 T14434 T14431 themeOf transcripts,increase
R7972 T14436 T14435 causeOf inhibitor,inhibited

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T14596 29-37 Positive_regulation denotes increase
T14595 52-63 Transcription denotes transcripts
T14590 41-46 Protein denotes IL-17
R8043 T14590 T14596 themeOf IL-17,increase
R8044 T14590 T14595 themeOf IL-17,transcripts

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T14704 29-37 Positive_regulation denotes increase
T14703 52-63 Transcription denotes transcripts
T14698 41-46 Protein denotes IL-17
R8127 T14698 T14704 themeOf IL-17,increase
R8128 T14698 T14703 themeOf IL-17,transcripts
R8131 T14703 T14704 themeOf transcripts,increase

biosemtest

Id Subject Object Predicate Lexical cue
T14484 43-48 UMLS/C1825592 denotes -17 m
T14475 167-176 UMLS/C0243077 denotes ibitor PD
T14474 130-139 UMLS/C0243077 denotes hibitor L
T14472 66-71 UMLS/C0231290 denotes ter s
T14471 54-65 UMLS/C1519595 denotes anscripts a
T14468 125-129 UMLS/C1705325 denotes 3K i
T14467 43-48 UMLS/C1623218 denotes -17 m
T14465 16-30 UMLS/C1512045 denotes se-dependent i
T14464 167-176 UMLS/C1999216 denotes ibitor PD
T14463 130-139 UMLS/C1999216 denotes hibitor L
T14462 125-129 UMLS/C1150481 denotes 3K i
T14461 5-13 UMLS/C1441672 denotes served a
T14459 108-117 UMLS/C0021469 denotes hibited b
T14458 125-129 UMLS/C0285761 denotes 3K i
T14456 72-83 UMLS/C1948023 denotes imulation w
T14455 66-71 UMLS/C0687676 denotes ter s
T14454 49-53 UMLS/C0035696 denotes NA t
T14453 183-186 UMLS/C0349966 denotes . 5
T14451 125-129 UP/P42336 denotes 3K i
T14450 31-39 UMLS/C0442805 denotes crease i
T14448 31-39 UMLS/C0442808 denotes crease i
T14446 140-148 UMLS/C0251991 denotes 294002 a
T14445 43-48 UMLS/C1522571 denotes -17 m
T14443 31-39 UMLS/C0205217 denotes crease i
T14442 72-83 UMLS/C1292856 denotes imulation w
T14440 177-181 UMLS/C0084183 denotes C (F
T14438 43-48 UMLS/C0384648 denotes -17 m
T14486 125-129 UMLS/C1368105 denotes 3K i
T14485 99-103 UMLS/C0323983 denotes is w

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T14564 186-187 -RRB- denotes )
T14563 185-186 CD denotes 5
T14562 180-184 NNP denotes Fig.
T14561 179-180 -LRB- denotes (
T14560 174-178 NN denotes PDTC
T14559 164-173 NN denotes inhibitor
T14558 158-163 NN denotes NF-κB
T14557 154-157 DT denotes the
T14556 151-153 IN denotes by
T14555 147-150 CC denotes and
T14554 138-146 NN denotes LY294002
T14553 128-137 NN denotes inhibitor
T14552 123-127 NN denotes PI3K
T14551 119-122 DT denotes the
T14550 116-118 IN denotes by
T14549 106-115 VB denotes inhibited
T14548 102-105 VB denotes was
T14547 97-101 DT denotes this
T14546 95-96 -COLON- denotes ;
T14545 87-95 NN denotes anti-CD3
T14544 82-86 IN denotes with
T14543 70-81 NN denotes stimulation
T14542 64-69 IN denotes after
T14541 52-63 NN denotes transcripts
T14540 47-51 NN denotes mRNA
T14539 41-46 NN denotes IL-17
T14538 38-40 IN denotes in
T14537 29-37 NN denotes increase
T14536 14-28 JJ denotes dose-dependent
T14535 12-13 DT denotes a
T14534 3-11 VB denotes observed
T14533 0-2 PRP denotes We
R8008 T14533 T14534 arg1Of We,observed
R8009 T14534 T14542 arg1Of observed,after
R8010 T14534 T14546 arg1Of observed,;
R8011 T14537 T14534 arg2Of increase,observed
R8012 T14537 T14535 arg1Of increase,a
R8013 T14537 T14536 arg1Of increase,dose-dependent
R8014 T14537 T14538 arg1Of increase,in
R8015 T14541 T14538 arg2Of transcripts,in
R8016 T14541 T14539 arg1Of transcripts,IL-17
R8017 T14541 T14540 arg1Of transcripts,mRNA
R8018 T14543 T14542 arg2Of stimulation,after
R8019 T14543 T14544 arg1Of stimulation,with
R8020 T14545 T14544 arg2Of anti-CD3,with
R8021 T14547 T14548 arg1Of this,was
R8022 T14547 T14549 arg2Of this,inhibited
R8023 T14549 T14546 arg2Of inhibited,;
R8024 T14549 T14548 arg2Of inhibited,was
R8025 T14549 T14550 arg1Of inhibited,by
R8026 T14549 T14556 arg1Of inhibited,by
R8027 T14549 T14561 arg1Of inhibited,(
R8028 T14550 T14555 arg1Of by,and
R8029 T14554 T14550 arg2Of LY294002,by
R8030 T14554 T14551 arg1Of LY294002,the
R8031 T14554 T14552 arg1Of LY294002,PI3K
R8032 T14554 T14553 arg1Of LY294002,inhibitor
R8033 T14556 T14555 arg2Of by,and
R8034 T14560 T14556 arg2Of PDTC,by
R8035 T14560 T14557 arg1Of PDTC,the
R8036 T14560 T14558 arg1Of PDTC,NF-κB
R8037 T14560 T14559 arg1Of PDTC,inhibitor
R8038 T14562 T14561 arg2Of Fig.,(
R8039 T14562 T14563 arg1Of Fig.,5
R8040 T14564 T14561 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T14567 41-46 Protein denotes IL-17

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T14587 92-95 http://www.uniprot.org/uniprot/P09693 denotes CD3
T14586 92-95 http://www.uniprot.org/uniprot/P07766 denotes CD3
T14585 92-95 http://www.uniprot.org/uniprot/P04234 denotes CD3
T14584 92-95 http://www.uniprot.org/uniprot/P20963 denotes CD3
T14583 41-46 http://www.uniprot.org/uniprot/Q16552 denotes IL-17

GO-BP

Id Subject Object Predicate Lexical cue
T14495 123-127 http://purl.obolibrary.org/obo/GO_0016303 denotes PI3K

GO-MF

Id Subject Object Predicate Lexical cue
T14571 123-127 http://purl.obolibrary.org/obo/GO_0016303 denotes PI3K
T14570 41-46 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17

sentences

Id Subject Object Predicate Lexical cue
T14489 0-188 Sentence denotes We observed a dose-dependent increase in IL-17 mRNA transcripts after stimulation with anti-CD3; this was inhibited by the PI3K inhibitor LY294002 and by the NF-κB inhibitor PDTC (Fig. 5).
T140 0-188 Sentence denotes We observed a dose-dependent increase in IL-17 mRNA transcripts after stimulation with anti-CD3; this was inhibited by the PI3K inhibitor LY294002 and by the NF-κB inhibitor PDTC (Fig. 5).

simple1

Id Subject Object Predicate Lexical cue
T14577 41-46 Protein denotes IL-17

DLUT931

Id Subject Object Predicate Lexical cue
T14606 14-28 Regulation denotes dose-dependent
T14605 29-37 Positive_regulation denotes increase
T14604 52-63 Transcription denotes transcripts
T14599 41-46 Protein denotes IL-17
R8049 T14599 T14604 themeOf IL-17,transcripts
R8052 T14604 T14605 themeOf transcripts,increase
R8053 T14605 T14606 themeOf increase,dose-dependent
R8054 T14606 T14605 themeOf dose-dependent,increase

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T14691 41-46 Protein denotes IL-17
T14690 180-183 Protein denotes Fig
T14689 87-95 Protein denotes anti-CD3
T14688 119-146 Entity denotes the PI3K inhibitor LY294002
T14687 123-127 Protein denotes PI3K
T14686 38-63 Protein denotes in IL-17 mRNA transcripts
T14685 158-173 Entity denotes NF-κB inhibitor
T14684 38-63 Protein denotes in IL-17 mRNA transcripts
T14682 119-146 Entity denotes the PI3K inhibitor LY294002

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T14674 187-188 . denotes .
T14673 186-187 -RRB- denotes )
T14672 185-186 CD denotes 5
T14671 180-184 NNP denotes Fig.
T14670 179-180 -LRB- denotes (
T14669 174-178 NNP denotes PDTC
T14668 164-173 NN denotes inhibitor
T14667 158-163 JJ denotes NF-κB
T14666 154-157 DT denotes the
T14665 151-153 IN denotes by
T14664 147-150 CC denotes and
T14663 138-146 NNP denotes LY294002
T14662 128-137 NN denotes inhibitor
T14661 123-127 NNP denotes PI3K
T14660 119-122 DT denotes the
T14659 116-118 IN denotes by
T14658 106-115 VBN denotes inhibited
T14657 102-105 VBD denotes was
T14656 97-101 DT denotes this
T14655 95-96 : denotes ;
T14654 87-95 JJ denotes anti-CD3
T14653 82-86 IN denotes with
T14652 70-81 NN denotes stimulation
T14651 64-69 IN denotes after
T14650 52-63 NNS denotes transcripts
T14649 47-51 NNP denotes mRNA
T14648 41-46 NNP denotes IL-17
T14647 38-40 IN denotes in
T14646 29-37 NN denotes increase
T14645 14-28 JJ denotes dose-dependent
T14644 12-13 DT denotes a
T14643 3-11 VBD denotes observed
T14642 0-2 PRP denotes We
R8088 T14642 T14643 nsubj We,observed
R8089 T14643 T14643 ROOT observed,observed
R8090 T14644 T14646 det a,increase
R8091 T14645 T14646 amod dose-dependent,increase
R8092 T14646 T14643 dobj increase,observed
R8093 T14647 T14646 prep in,increase
R8094 T14648 T14649 compound IL-17,mRNA
R8095 T14649 T14650 compound mRNA,transcripts
R8096 T14650 T14647 pobj transcripts,in
R8097 T14651 T14646 prep after,increase
R8098 T14652 T14651 pobj stimulation,after
R8099 T14653 T14652 prep with,stimulation
R8100 T14654 T14653 pobj anti-CD3,with
R8101 T14655 T14658 punct ;,inhibited
R8102 T14656 T14658 nsubjpass this,inhibited
R8103 T14657 T14658 auxpass was,inhibited
R8104 T14658 T14643 ccomp inhibited,observed
R8105 T14659 T14658 agent by,inhibited
R8106 T14660 T14662 det the,inhibitor
R8107 T14661 T14662 compound PI3K,inhibitor
R8108 T14662 T14659 pobj inhibitor,by
R8109 T14663 T14662 appos LY294002,inhibitor
R8110 T14664 T14659 cc and,by
R8111 T14665 T14659 conj by,by
R8112 T14666 T14669 det the,PDTC
R8113 T14667 T14669 amod NF-κB,PDTC
R8114 T14668 T14669 compound inhibitor,PDTC
R8115 T14669 T14665 pobj PDTC,by
R8116 T14670 T14671 punct (,Fig.
R8117 T14671 T14669 appos Fig.,PDTC
R8118 T14672 T14671 nummod 5,Fig.
R8119 T14673 T14669 punct ),PDTC
R8120 T14674 T14643 punct .,observed

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T14574 158-163 Protein denotes NF-κB
T14573 123-127 Protein denotes PI3K
T14572 87-95 Protein denotes anti-CD3

testone

Id Subject Object Predicate Lexical cue
T14420 106-115 Negative_regulation denotes inhibited
T14419 52-63 Transcription denotes transcripts
T14418 47-51 Transcription denotes mRNA
T14417 29-37 Positive_regulation denotes increase
T14416 19-28 Regulation denotes dependent
T14411 41-46 Protein denotes IL-17
R7957 T14411 T14417 themeOf IL-17,increase
R7960 T14416 T14420 themeOf dependent,inhibited
R7961 T14417 T14420 themeOf increase,inhibited
R7962 T14417 T14416 themeOf increase,dependent
R7963 T14418 T14417 themeOf mRNA,increase
R7964 T14418 T14420 themeOf mRNA,inhibited