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PMC:1064895 / 16579-16783 JSONTXT

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test3

Id Subject Object Predicate Lexical cue
T11672 149-154 Protein denotes IL-17
T11671 135-143 Gene_expression denotes produced
T11670 117-121 Protein denotes CD28
T11669 62-72 Gene_expression denotes production
T11668 56-61 Protein denotes IL-17
T11667 44-55 Positive_regulation denotes upregulated
T11653 149-154 Protein denotes IL-17
T11652 117-121 Protein denotes CD28
T11651 56-61 Protein denotes IL-17
R6322 T11668 T11669 themeOf IL-17,production
R6323 T11669 T11667 themeOf production,upregulated
R6324 T11672 T11671 themeOf IL-17,produced

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T12073 44-55 Positive_regulation denotes upregulated
T12072 135-143 Gene_expression denotes produced
T12071 62-72 Gene_expression denotes production
T12064 149-154 Protein denotes IL-17
T12063 117-121 Protein denotes CD28
T12062 56-61 Protein denotes IL-17
R6513 T12062 T12071 themeOf IL-17,production
R6514 T12064 T12072 themeOf IL-17,produced
R6517 T12071 T12073 themeOf production,upregulated

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T12356 135-143 Gene_expression denotes produced
T12355 44-55 Positive_regulation denotes upregulated
T12354 62-72 Gene_expression denotes production
T12346 149-154 Protein denotes IL-17
T12345 117-121 Protein denotes CD28
T12344 56-61 Protein denotes IL-17
R6732 T12344 T12354 themeOf IL-17,production
R6733 T12346 T12356 themeOf IL-17,produced
R6736 T12354 T12355 themeOf production,upregulated

biosemtest

Id Subject Object Predicate Lexical cue
T11760 158-171 UMLS/C0332232 denotes proximately 1
T11756 151-156 UMLS/C1825592 denotes -17 (
T11751 58-74 UMLS/C1819444 denotes -17 production u
T11733 146-150 UMLS/C0205172 denotes re I
T11732 151-156 UMLS/C1623218 denotes -17 (
T11719 99-110 UMLS/C1947911 denotes mbination o
T11717 146-150 UMLS/C0439064 denotes re I
T11706 75-80 UMLS/C0547043 denotes to 3
T11698 14-19 UMLS/C0039224 denotes ble 1
T11697 151-156 UMLS/C1522571 denotes -17 (
T11688 99-110 UMLS/C0453882 denotes mbination o
T11687 99-110 UMLS/C0205195 denotes mbination o
T11682 14-19 UMLS/C1706073 denotes ble 1
T11681 14-19 UMLS/C1706074 denotes ble 1
T11680 151-156 UMLS/C0384648 denotes -17 (

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T11911 198-203 RB denotes alone
T11910 189-197 NN denotes anti-CD3
T11909 184-188 IN denotes than
T11908 182-183 -RRB- denotes )
T11907 170-182 RB denotes 1.3-1.5-fold
T11906 156-169 RB denotes approximately
T11905 155-156 -LRB- denotes (
T11904 149-154 NN denotes IL-17
T11903 144-148 JJ denotes more
T11902 135-143 VB denotes produced
T11901 126-134 NN denotes anti-CD3
T11900 122-125 CC denotes and
T11899 112-121 NN denotes anti-CD28
T11898 109-111 IN denotes of
T11897 97-108 NN denotes combination
T11896 93-96 DT denotes the
T11895 89-92 CC denotes and
T11894 87-88 -COMMA- denotes ,
T11893 79-87 RB denotes 3.7-fold
T11892 76-78 TO denotes to
T11891 73-75 IN denotes up
T11890 62-72 NN denotes production
T11889 56-61 NN denotes IL-17
T11888 44-55 VB denotes upregulated
T11887 30-43 RB denotes significantly
T11886 21-29 JJ denotes anti-CD3
T11885 19-20 -COMMA- denotes ,
T11884 18-19 CD denotes 1
T11883 12-17 JJ denotes Table
T11882 9-11 IN denotes in
T11881 3-8 VB denotes shown
T11880 0-2 IN denotes As
R6427 T11881 T11880 arg2Of shown,As
R6428 T11881 T11882 arg1Of shown,in
R6429 T11884 T11882 arg2Of 1,in
R6430 T11884 T11883 arg1Of 1,Table
R6431 T11886 T11888 arg1Of anti-CD3,upregulated
R6432 T11888 T11880 arg1Of upregulated,As
R6433 T11888 T11885 arg1Of upregulated,","
R6434 T11888 T11887 arg1Of upregulated,significantly
R6435 T11888 T11895 arg1Of upregulated,and
R6436 T11890 T11888 arg2Of production,upregulated
R6437 T11890 T11889 arg1Of production,IL-17
R6438 T11890 T11892 arg1Of production,to
R6439 T11892 T11891 arg1Of to,up
R6440 T11893 T11892 arg2Of 3.7-fold,to
R6441 T11895 T11894 arg1Of and,","
R6442 T11897 T11896 arg1Of combination,the
R6443 T11897 T11898 arg1Of combination,of
R6444 T11897 T11902 arg1Of combination,produced
R6445 T11899 T11900 arg1Of anti-CD28,and
R6446 T11900 T11898 arg2Of and,of
R6447 T11901 T11900 arg2Of anti-CD3,and
R6448 T11902 T11895 arg2Of produced,and
R6449 T11902 T11905 arg1Of produced,(
R6450 T11902 T11909 arg1Of produced,than
R6451 T11904 T11902 arg2Of IL-17,produced
R6452 T11904 T11903 arg1Of IL-17,more
R6453 T11907 T11905 arg2Of 1.3-1.5-fold,(
R6454 T11907 T11906 arg1Of 1.3-1.5-fold,approximately
R6455 T11908 T11905 arg3Of ),(
R6456 T11910 T11909 arg2Of anti-CD3,than
R6457 T11910 T11911 arg1Of anti-CD3,alone

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T11956 149-154 Protein denotes IL-17
T11955 117-121 Protein denotes CD28
T11954 56-61 Protein denotes IL-17

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T12055 117-121 http://www.uniprot.org/uniprot/P10747 denotes CD28
T12052 194-197 http://www.uniprot.org/uniprot/P09693 denotes CD3
T12051 131-134 http://www.uniprot.org/uniprot/P09693 denotes CD3
T12050 26-29 http://www.uniprot.org/uniprot/P09693 denotes CD3
T12045 194-197 http://www.uniprot.org/uniprot/P07766 denotes CD3
T12044 131-134 http://www.uniprot.org/uniprot/P07766 denotes CD3
T12043 26-29 http://www.uniprot.org/uniprot/P07766 denotes CD3
T12038 194-197 http://www.uniprot.org/uniprot/P04234 denotes CD3
T12037 131-134 http://www.uniprot.org/uniprot/P04234 denotes CD3
T12036 26-29 http://www.uniprot.org/uniprot/P04234 denotes CD3
T12031 194-197 http://www.uniprot.org/uniprot/P20963 denotes CD3
T12030 131-134 http://www.uniprot.org/uniprot/P20963 denotes CD3
T12029 26-29 http://www.uniprot.org/uniprot/P20963 denotes CD3
T12024 149-154 http://www.uniprot.org/uniprot/Q16552 denotes IL-17
T12023 56-61 http://www.uniprot.org/uniprot/Q16552 denotes IL-17

GO-BP

Id Subject Object Predicate Lexical cue
T11770 56-72 http://purl.obolibrary.org/obo/GO_0032620 denotes IL-17 production
T11767 56-72 http://purl.obolibrary.org/obo/GO_0032660 denotes IL-17 production

GO-MF

Id Subject Object Predicate Lexical cue
T11964 149-154 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17
T11963 56-61 http://purl.obolibrary.org/obo/GO_0030367 denotes IL-17

sentences

Id Subject Object Predicate Lexical cue
T11764 0-204 Sentence denotes As shown in Table 1, anti-CD3 significantly upregulated IL-17 production up to 3.7-fold, and the combination of anti-CD28 and anti-CD3 produced more IL-17 (approximately 1.3-1.5-fold) than anti-CD3 alone.
T122 0-204 Sentence denotes As shown in Table 1, anti-CD3 significantly upregulated IL-17 production up to 3.7-fold, and the combination of anti-CD28 and anti-CD3 produced more IL-17 (approximately 1.3-1.5-fold) than anti-CD3 alone.

simple1

Id Subject Object Predicate Lexical cue
T12016 149-154 Protein denotes IL-17
T12015 117-121 Protein denotes CD28
T12014 56-61 Protein denotes IL-17

DLUT931

Id Subject Object Predicate Lexical cue
T12094 44-55 Positive_regulation denotes upregulated
T12093 135-143 Gene_expression denotes produced
T12092 62-72 Gene_expression denotes production
T12083 149-154 Protein denotes IL-17
T12082 117-121 Protein denotes CD28
T12081 56-61 Protein denotes IL-17
R6523 T12081 T12092 themeOf IL-17,production
R6524 T12083 T12093 themeOf IL-17,produced
R6530 T12092 T12094 themeOf production,upregulated

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T12336 56-78 Gene_expression denotes IL-17 production up to
T12334 93-183 Gene_expression denotes the combination of anti-CD28 and anti-CD3 produced more IL-17 (approximately 1.3-1.5-fold)
T12333 9-87 Positive_regulation denotes in Table 1, anti-CD3 significantly upregulated IL-17 production up to 3.7-fold
T12325 184-197 Protein denotes than anti-CD3
T12324 126-134 Protein denotes anti-CD3
T12321 144-183 Protein denotes more IL-17 (approximately 1.3-1.5-fold)
T12319 21-29 Protein denotes anti-CD3
T12316 56-61 Protein denotes IL-17
T12312 112-121 Protein denotes anti-CD28
R6722 T12316 T12336 themeOf IL-17,IL-17 production up to
R6723 T12319 T12333 causeOf anti-CD3,"in Table 1, anti-CD3 significantly upregulated IL-17 production up to 3.7-fold"
R6724 T12321 T12334 themeOf more IL-17 (approximately 1.3-1.5-fold),the combination of anti-CD28 and anti-CD3 produced more IL-17 (approximately 1.3-1.5-fold)
R6726 T12336 T12333 themeOf IL-17 production up to,"in Table 1, anti-CD3 significantly upregulated IL-17 production up to 3.7-fold"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T12240 203-204 . denotes .
T12239 198-203 RB denotes alone
T12238 189-197 JJ denotes anti-CD3
T12237 184-188 IN denotes than
T12236 182-183 -RRB- denotes )
T12235 178-182 VB denotes fold
T12234 177-178 : denotes -
T12233 175-177 SYM denotes .5
T12232 170-175 CD denotes 1.3-1
T12231 156-169 RB denotes approximately
T12230 155-156 -LRB- denotes (
T12229 149-154 JJ denotes IL-17
T12228 144-148 RBR denotes more
T12227 135-143 VBN denotes produced
T12226 126-134 JJ denotes anti-CD3
T12225 122-125 CC denotes and
T12224 112-121 JJ denotes anti-CD28
T12223 109-111 IN denotes of
T12222 97-108 NN denotes combination
T12221 93-96 DT denotes the
T12220 89-92 CC denotes and
T12219 87-88 , denotes ,
T12218 79-87 CD denotes 3.7-fold
T12217 76-78 TO denotes to
T12216 73-75 IN denotes up
T12215 62-72 NN denotes production
T12214 56-61 NN denotes IL-17
T12213 44-55 JJ denotes upregulated
T12212 30-43 RB denotes significantly
T12211 21-29 JJ denotes anti-CD3
T12210 19-20 , denotes ,
T12209 18-19 CD denotes 1
T12208 12-17 NNP denotes Table
T12207 9-11 IN denotes in
T12206 3-8 VBN denotes shown
T12205 0-2 IN denotes As
R6633 T12205 T12206 mark As,shown
R6634 T12206 T12227 advcl shown,produced
R6635 T12207 T12206 prep in,shown
R6636 T12208 T12207 pobj Table,in
R6637 T12209 T12208 nummod 1,Table
R6638 T12210 T12227 punct ",",produced
R6639 T12211 T12215 nmod anti-CD3,production
R6640 T12212 T12213 advmod significantly,upregulated
R6641 T12213 T12215 nmod upregulated,production
R6642 T12214 T12215 compound IL-17,production
R6643 T12215 T12227 nsubj production,produced
R6644 T12216 T12215 prep up,production
R6645 T12217 T12216 prep to,up
R6646 T12218 T12217 pobj 3.7-fold,to
R6647 T12219 T12215 punct ",",production
R6648 T12220 T12215 cc and,production
R6649 T12221 T12222 det the,combination
R6650 T12222 T12215 conj combination,production
R6651 T12223 T12222 prep of,combination
R6652 T12224 T12227 amod anti-CD28,produced
R6653 T12225 T12224 cc and,anti-CD28
R6654 T12226 T12224 conj anti-CD3,anti-CD28
R6655 T12227 T12227 ROOT produced,produced
R6656 T12228 T12229 advmod more,IL-17
R6657 T12229 T12227 dobj IL-17,produced
R6658 T12230 T12235 punct (,fold
R6659 T12231 T12232 advmod approximately,1.3-1
R6660 T12232 T12235 nummod 1.3-1,fold
R6661 T12233 T12235 punct .5,fold
R6662 T12234 T12235 punct -,fold
R6663 T12235 T12229 appos fold,IL-17
R6664 T12236 T12235 punct ),fold
R6665 T12237 T12229 prep than,IL-17
R6666 T12238 T12237 pobj anti-CD3,than
R6667 T12239 T12238 advmod alone,anti-CD3
R6668 T12240 T12227 punct .,produced

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T12001 44-55 Positive_regulation denotes upregulated
T12000 135-143 Gene_expression denotes produced
T11999 135-143 Gene_expression denotes produced
T11998 62-72 Gene_expression denotes production
T11997 194-197 Protein denotes CD3
T11996 144-154 Protein denotes more IL-17
T11995 126-134 Protein denotes anti-CD3
T11994 112-121 Protein denotes anti-CD28
T11993 56-61 Protein denotes IL-17
T11992 21-29 Protein denotes anti-CD3
T11991 12-19 Protein denotes Table 1
R6503 T11992 T12001 causeOf anti-CD3,upregulated
R6504 T11993 T11998 themeOf IL-17,production
R6505 T11996 T11999 themeOf more IL-17,produced
R6506 T11997 T12000 themeOf CD3,produced
R6507 T11998 T12001 themeOf production,upregulated

testone

Id Subject Object Predicate Lexical cue
T11643 135-143 Gene_expression denotes produced
T11642 62-72 Gene_expression denotes production
T11641 44-55 Positive_regulation denotes upregulated
T11633 149-154 Protein denotes IL-17
T11632 117-121 Protein denotes CD28
T11631 56-61 Protein denotes IL-17
R6310 T11631 T11642 themeOf IL-17,production
R6311 T11633 T11643 themeOf IL-17,produced
R6315 T11642 T11641 themeOf production,upregulated