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PMC:1064873 / 18178-18243 JSONTXT

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LappsTest

Id Subject Object Predicate Lexical cue
T15436 50-57 Protein denotes RA CD4+
T15435 25-30 Protein denotes STAT3
T15434 10-15 Protein denotes IL-10

biosemtest

Id Subject Object Predicate Lexical cue
T15839 10-15 UMLS/C1149215 denotes IL-10
T15652 25-30 UMLS/C0253050 denotes STAT3
T15637 10-15 UMLS/C0085295 denotes IL-10
T15629 16-24 UMLS/C0127400 denotes mediated
T15627 16-24 UMLS/C0086597 denotes mediated
T15598 58-65 UMLS/C0039194 denotes T cells
T15588 31-46 UMLS/C0031715 denotes phosphorylation
T15771 10-15 UMLS/C1522550 denotes IL-10
T15761 10-15 UMLS/C1334098 denotes IL-10
T15724 25-30 UMLS/C1367307 denotes STAT3

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T16202 60-65 NN denotes cells
T16201 58-59 NN denotes T
T16200 53-57 JJ denotes CD4+
T16199 50-52 NN denotes RA
T16198 47-49 IN denotes in
T16197 31-46 NN denotes phosphorylation
T16196 25-30 NN denotes STAT3
T16195 10-24 JJ denotes IL-10-mediated
T16194 0-9 JJ denotes Defective
R8001 T16197 T16194 arg1Of phosphorylation,Defective
R8002 T16197 T16195 arg1Of phosphorylation,IL-10-mediated
R8003 T16197 T16196 arg1Of phosphorylation,STAT3
R8004 T16197 T16198 arg1Of phosphorylation,in
R8005 T16202 T16198 arg2Of cells,in
R8006 T16202 T16199 arg1Of cells,RA
R8007 T16202 T16200 arg1Of cells,CD4+
R8008 T16202 T16201 arg1Of cells,T

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T15956 53-56 Protein denotes CD4
T15955 25-30 Protein denotes STAT3
T15954 10-15 Protein denotes IL-10

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T16149 53-56 http://www.uniprot.org/uniprot/P01730 denotes CD4
T16134 25-30 http://www.uniprot.org/uniprot/P40763 denotes STAT3
T16124 10-15 http://www.uniprot.org/uniprot/P22301 denotes IL-10

GO-BP

Id Subject Object Predicate Lexical cue
T15862 31-46 http://purl.obolibrary.org/obo/GO_0016310 denotes phosphorylation

GO-CC

Id Subject Object Predicate Lexical cue
T16002 60-65 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

GO-MF

Id Subject Object Predicate Lexical cue
T15991 10-15 http://purl.obolibrary.org/obo/GO_0005141 denotes IL-10

sentences

Id Subject Object Predicate Lexical cue
T15852 0-65 Sentence denotes Defective IL-10-mediated STAT3 phosphorylation in RA CD4+ T cells
T109 0-65 Sentence denotes Defective IL-10-mediated STAT3 phosphorylation in RA CD4+ T cells

simple1

Id Subject Object Predicate Lexical cue
T16159 53-56 Protein denotes CD4
T16158 25-30 Protein denotes STAT3
T16157 10-15 Protein denotes IL-10

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T17023 53-56 Protein denotes CD4
T17022 25-30 Protein denotes STAT3
T17021 10-15 Protein denotes IL-10
T17060 31-46 Phosphorylation denotes phosphorylation
T17059 16-24 Positive_regulation denotes mediated
T17058 0-9 Negative_regulation denotes Defective
R8674 T17022 T17058 themeOf STAT3,Defective
R8675 T17022 T17059 themeOf STAT3,mediated
R8676 T17022 T17060 themeOf STAT3,phosphorylation
R8708 T17060 T17058 themeOf phosphorylation,Defective
R8709 T17060 T17059 themeOf phosphorylation,mediated

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T16430 53-56 Protein denotes CD4
T16429 25-30 Protein denotes STAT3
T16428 10-15 Protein denotes IL-10
T16467 0-9 Negative_regulation denotes Defective
T16466 31-46 Phosphorylation denotes phosphorylation
T16465 16-24 Positive_regulation denotes mediated
R8239 T16428 T16465 causeOf IL-10,mediated
R8240 T16429 T16466 themeOf STAT3,phosphorylation
R8266 T16466 T16467 themeOf phosphorylation,Defective
R8267 T16466 T16465 themeOf phosphorylation,mediated

DLUT931

Id Subject Object Predicate Lexical cue
T16747 53-56 Protein denotes CD4
T16746 25-30 Protein denotes STAT3
T16745 10-15 Protein denotes IL-10
T16784 16-24 Positive_regulation denotes mediated
T16783 0-9 Negative_regulation denotes Defective
T16782 31-46 Phosphorylation denotes phosphorylation
R8533 T16745 T16784 causeOf IL-10,mediated
R8534 T16746 T16782 themeOf STAT3,phosphorylation
R8562 T16782 T16783 themeOf phosphorylation,Defective
R8563 T16782 T16784 themeOf phosphorylation,mediated

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T17010 0-65 Regulation denotes Defective IL-10-mediated STAT3 phosphorylation in RA CD4+ T cells
T17007 25-65 Phosphorylation denotes STAT3 phosphorylation in RA CD4+ T cells
T16949 0-15 Protein denotes Defective IL-10
T16976 50-65 Entity denotes RA CD4+ T cells
T16969 50-52 Protein denotes RA
T16968 25-30 Protein denotes STAT3
R8654 T16949 T17010 causeOf Defective IL-10,Defective IL-10-mediated STAT3 phosphorylation in RA CD4+ T cells
R8661 T16968 T17007 themeOf STAT3,STAT3 phosphorylation in RA CD4+ T cells
R8673 T17007 T17010 themeOf STAT3 phosphorylation in RA CD4+ T cells,Defective IL-10-mediated STAT3 phosphorylation in RA CD4+ T cells

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T16503 60-65 NNS denotes cells
T16502 58-59 NNP denotes T
T16501 56-57 VBD denotes +
T16500 53-56 NNP denotes CD4
T16499 50-52 NNP denotes RA
T16498 47-49 IN denotes in
T16497 31-46 NN denotes phosphorylation
T16496 25-30 CD denotes STAT3
T16495 10-24 JJ denotes IL-10-mediated
T16494 0-9 JJ denotes Defective
R8282 T16494 T16497 amod Defective,phosphorylation
R8283 T16495 T16497 amod IL-10-mediated,phosphorylation
R8284 T16496 T16497 nummod STAT3,phosphorylation
R8285 T16497 T16501 nsubj phosphorylation,+
R8286 T16498 T16497 prep in,phosphorylation
R8287 T16499 T16500 compound RA,CD4
R8288 T16500 T16498 pobj CD4,in
R8289 T16501 T16501 ROOT +,+
R8290 T16502 T16503 compound T,cells
R8291 T16503 T16501 dobj cells,+

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T16055 16-24 Positive_regulation denotes mediated
T16054 16-24 Positive_regulation denotes mediated
T16053 0-9 Negative_regulation denotes Defective
T16052 0-9 Negative_regulation denotes Defective
T16051 31-46 Phosphorylation denotes phosphorylation
T16050 31-46 Phosphorylation denotes phosphorylation
T16049 50-65 Protein denotes RA CD4+ T cells
T16048 25-30 Protein denotes STAT3
T16047 10-15 Protein denotes IL-10
R7952 T16047 T16054 causeOf IL-10,mediated
R7953 T16047 T16055 causeOf IL-10,mediated
R7954 T16048 T16050 themeOf STAT3,phosphorylation
R7955 T16049 T16051 themeOf RA CD4+ T cells,phosphorylation
R7956 T16050 T16052 themeOf phosphorylation,Defective
R7957 T16050 T16054 themeOf phosphorylation,mediated
R7958 T16051 T16053 themeOf phosphorylation,Defective
R7959 T16051 T16055 themeOf phosphorylation,mediated

test3

Id Subject Object Predicate Lexical cue
T15509 53-56 Protein denotes CD4
T15508 31-46 Phosphorylation denotes phosphorylation
T15507 25-30 Protein denotes STAT3
T15506 16-24 Positive_regulation denotes mediated
T15505 10-15 Protein denotes IL-10
T15504 0-9 Negative_regulation denotes Defective
T15469 53-56 Protein denotes CD4
T15468 25-30 Protein denotes STAT3
T15467 10-15 Protein denotes IL-10
R7846 T15505 T15506 causeOf IL-10,mediated
R7847 T15506 T15504 themeOf mediated,Defective
R7848 T15507 T15508 themeOf STAT3,phosphorylation
R7849 T15508 T15506 themeOf phosphorylation,mediated

testone

Id Subject Object Predicate Lexical cue
T15402 31-46 Phosphorylation denotes phosphorylation
T15401 16-24 Positive_regulation denotes mediated
T15400 0-9 Negative_regulation denotes Defective
T15365 53-56 Protein denotes CD4
T15364 25-30 Protein denotes STAT3
T15363 10-15 Protein denotes IL-10
R7800 T15363 T15400 causeOf IL-10,Defective
R7801 T15363 T15401 causeOf IL-10,mediated
R7802 T15364 T15402 themeOf STAT3,phosphorylation
R7828 T15401 T15400 themeOf mediated,Defective
R7829 T15402 T15401 themeOf phosphorylation,mediated