BB-rel@ldeleger:BB-rel-19622846 / 95-964 JSONTXT

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bionlp-ost-19-BB-rel-train

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2 0-869 Paragraph denotes We examined jail environmental surfaces to explore whether they might serve as reservoirs of viable methicillin-resistant Staphylococcus aureus (MRSA). We swabbed 132 surfaces, inoculated primary and secondary mannitol salts and oxacillin-resistant screening agar, and used API tests to identify S. aureus and E-tests to determine methicillin/oxacillin resistance. We recovered S. aureus from 10 (7.6%) surfaces; eight (6.1%) isolates were MRSA. We ran pulsed-field gel electrophoresis on six resistant isolates and observed three patterns, one of which was identical to that identified in a previous study of inmates' nasal specimens. Finding MRSA-contaminated surfaces on a variety of environmental surfaces in the absence of an overt outbreak emphasizes that correctional facilities should have protocols for environmental cleaning as a component of MRSA prevention.
T9 12-39 Habitat denotes jail environmental surfaces
T8 12-16 Habitat denotes jail
T10 100-121 Phenotype denotes methicillin-resistant
T11 122-143 Microorganism denotes Staphylococcus aureus
T12 145-149 Microorganism denotes MRSA
T13 145-149 Phenotype denotes MRSA
T14 188-224 Habitat denotes primary and secondary mannitol salts
T15 229-263 Habitat denotes oxacillin-resistant screening agar
T16 229-248 Phenotype denotes oxacillin-resistant
T17 296-305 Microorganism denotes S. aureus
T18-0 331-342 _FRAGMENT denotes methicillin
T18-1 353-363 Phenotype denotes resistance
T19 343-363 Phenotype denotes oxacillin resistance
T20 378-387 Microorganism denotes S. aureus
T21 440-444 Microorganism denotes MRSA
T22 440-444 Phenotype denotes MRSA
T23 493-502 Phenotype denotes resistant
T24 610-624 Habitat denotes inmates' nasal
T25 610-617 Habitat denotes inmates
T26 644-648 Microorganism denotes MRSA
T27 644-648 Phenotype denotes MRSA
T28 762-785 Habitat denotes correctional facilities
T29 853-857 Microorganism denotes MRSA
T30 853-857 Phenotype denotes MRSA
E6 122-143 Exhibits denotes Staphylococcus aureus
E7 145-149 Exhibits denotes MRSA
E9 378-387 Lives_In denotes S. aureus
E10 378-387 Lives_In denotes S. aureus
E11 378-387 Lives_In denotes S. aureus
E12 378-387 Lives_In denotes S. aureus
E8 378-387 Exhibits denotes S. aureus
E14 440-444 Lives_In denotes MRSA
E15 440-444 Lives_In denotes MRSA
E16 440-444 Lives_In denotes MRSA
E17 440-444 Lives_In denotes MRSA
E18 440-444 Lives_In denotes MRSA
E19 440-444 Lives_In denotes MRSA
E13 440-444 Exhibits denotes MRSA
E21 644-648 Lives_In denotes MRSA
E20 644-648 Exhibits denotes MRSA
E23 853-857 Lives_In denotes MRSA
E22 853-857 Exhibits denotes MRSA
R40 E21 T28 Location MRSA,correctional facilities
R22 E12 T14 Location S. aureus,primary and secondary mannitol salts
R11 E6 T11 Microorganism Staphylococcus aureus,Staphylococcus aureus
R12 E6 T10 Property Staphylococcus aureus,methicillin-resistant
R13 E7 T12 Microorganism MRSA,MRSA
R14 E7 T13 Property MRSA,MRSA
R15 E9 T20 Microorganism S. aureus,S. aureus
R16 E9 T15 Location S. aureus,oxacillin-resistant screening agar
R17 E10 T20 Microorganism S. aureus,S. aureus
R18 E10 T8 Location S. aureus,jail
R19 E11 T20 Microorganism S. aureus,S. aureus
R20 E11 T9 Location S. aureus,jail environmental surfaces
R21 E12 T20 Microorganism S. aureus,S. aureus
R23 E8 T20 Microorganism S. aureus,S. aureus
R24 E8 T22 Property S. aureus,MRSA
R25 E14 T21 Microorganism MRSA,MRSA
R26 E14 T24 Location MRSA,inmates' nasal
R27 E15 T21 Microorganism MRSA,MRSA
R28 E15 T9 Location MRSA,jail environmental surfaces
R29 E16 T21 Microorganism MRSA,MRSA
R30 E16 T14 Location MRSA,primary and secondary mannitol salts
R31 E17 T21 Microorganism MRSA,MRSA
R32 E17 T15 Location MRSA,oxacillin-resistant screening agar
R33 E18 T21 Microorganism MRSA,MRSA
R34 E18 T25 Location MRSA,inmates
R35 E19 T21 Microorganism MRSA,MRSA
R36 E19 T8 Location MRSA,jail
R37 E13 T21 Microorganism MRSA,MRSA
R38 E13 T22 Property MRSA,MRSA
R39 E21 T26 Microorganism MRSA,MRSA
R41 E20 T26 Microorganism MRSA,MRSA
R42 E20 T27 Property MRSA,MRSA
R43 E23 T29 Microorganism MRSA,MRSA
R44 E23 T28 Location MRSA,correctional facilities
R45 E22 T29 Microorganism MRSA,MRSA
R46 E22 T30 Property MRSA,MRSA
C-T18-0 T18-1 T18-0 _lexicallyChainedTo resistance,methicillin