BB-norm+ner@ldeleger:BB-norm+ner-19622846 JSONTXT

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    bionlp-ost-19-BB-norm-ner-train

    {"project":"bionlp-ost-19-BB-norm-ner-train","denotations":[{"id":"T1","span":{"begin":0,"end":94},"obj":"Title"},{"id":"T2","span":{"begin":95,"end":964},"obj":"Paragraph"},{"id":"T3","span":{"begin":13,"end":34},"obj":"Microorganism"},{"id":"T4","span":{"begin":45,"end":49},"obj":"Microorganism"},{"id":"T5","span":{"begin":45,"end":49},"obj":"Phenotype"},{"id":"T6","span":{"begin":53,"end":93},"obj":"Habitat"},{"id":"T7","span":{"begin":81,"end":85},"obj":"Habitat"},{"id":"T9","span":{"begin":107,"end":134},"obj":"Habitat"},{"id":"T8","span":{"begin":107,"end":111},"obj":"Habitat"},{"id":"T10","span":{"begin":195,"end":216},"obj":"Phenotype"},{"id":"T11","span":{"begin":217,"end":238},"obj":"Microorganism"},{"id":"T12","span":{"begin":240,"end":244},"obj":"Microorganism"},{"id":"T13","span":{"begin":240,"end":244},"obj":"Phenotype"},{"id":"T14","span":{"begin":283,"end":319},"obj":"Habitat"},{"id":"T15","span":{"begin":324,"end":358},"obj":"Habitat"},{"id":"T16","span":{"begin":324,"end":343},"obj":"Phenotype"},{"id":"T17","span":{"begin":391,"end":400},"obj":"Microorganism"},{"id":"T18-0","span":{"begin":426,"end":437},"obj":"_FRAGMENT"},{"id":"T18-1","span":{"begin":448,"end":458},"obj":"Phenotype"},{"id":"T19","span":{"begin":438,"end":458},"obj":"Phenotype"},{"id":"T20","span":{"begin":473,"end":482},"obj":"Microorganism"},{"id":"T21","span":{"begin":535,"end":539},"obj":"Microorganism"},{"id":"T22","span":{"begin":535,"end":539},"obj":"Phenotype"},{"id":"T23","span":{"begin":588,"end":597},"obj":"Phenotype"},{"id":"T24","span":{"begin":705,"end":719},"obj":"Habitat"},{"id":"T25","span":{"begin":705,"end":712},"obj":"Habitat"},{"id":"T26","span":{"begin":739,"end":743},"obj":"Microorganism"},{"id":"T27","span":{"begin":739,"end":743},"obj":"Phenotype"},{"id":"T28","span":{"begin":857,"end":880},"obj":"Habitat"},{"id":"T29","span":{"begin":948,"end":952},"obj":"Microorganism"},{"id":"T30","span":{"begin":948,"end":952},"obj":"Phenotype"}],"relations":[{"id":"C-T18-0","pred":"_lexicallyChainedTo","subj":"T18-1","obj":"T18-0"}],"attributes":[{"id":"A27","pred":"NCBI_Taxonomy","subj":"T26","obj":"1280"},{"id":"A1","pred":"NCBI_Taxonomy","subj":"T3","obj":"1280"},{"id":"A12","pred":"OntoBiotope","subj":"T14","obj":"OBT:000007"},{"id":"A20","pred":"OntoBiotope","subj":"T22","obj":"OBT:002817"},{"id":"A21","pred":"NCBI_Taxonomy","subj":"T21","obj":"1280"},{"id":"A13","pred":"OntoBiotope","subj":"T15","obj":"OBT:000041"},{"id":"A14","pred":"OntoBiotope","subj":"T15","obj":"OBT:000031"},{"id":"A6","pred":"OntoBiotope","subj":"T8","obj":"OBT:000695"},{"id":"A28","pred":"OntoBiotope","subj":"T28","obj":"OBT:000695"},{"id":"A16","pred":"NCBI_Taxonomy","subj":"T17","obj":"1280"},{"id":"A30","pred":"NCBI_Taxonomy","subj":"T29","obj":"1280"},{"id":"A10","pred":"OntoBiotope","subj":"T13","obj":"OBT:002817"},{"id":"A19","pred":"NCBI_Taxonomy","subj":"T20","obj":"1280"},{"id":"A7","pred":"OntoBiotope","subj":"T9","obj":"OBT:000006"},{"id":"A29","pred":"OntoBiotope","subj":"T30","obj":"OBT:002817"},{"id":"A24","pred":"OntoBiotope","subj":"T24","obj":"OBT:000767"},{"id":"A15","pred":"OntoBiotope","subj":"T16","obj":"OBT:002920"},{"id":"A17","pred":"OntoBiotope","subj":"T18-0","obj":"OBT:002817"},{"id":"A11","pred":"NCBI_Taxonomy","subj":"T12","obj":"1280"},{"id":"A3","pred":"NCBI_Taxonomy","subj":"T4","obj":"1280"},{"id":"A5","pred":"OntoBiotope","subj":"T7","obj":"OBT:000695"},{"id":"A2","pred":"OntoBiotope","subj":"T5","obj":"OBT:002817"},{"id":"A25","pred":"OntoBiotope","subj":"T25","obj":"OBT:003291"},{"id":"A4","pred":"OntoBiotope","subj":"T6","obj":"OBT:000006"},{"id":"A26","pred":"OntoBiotope","subj":"T27","obj":"OBT:002817"},{"id":"A22","pred":"OntoBiotope","subj":"T23","obj":"OBT:002817"},{"id":"A23","pred":"OntoBiotope","subj":"T23","obj":"OBT:002920"},{"id":"A8","pred":"OntoBiotope","subj":"T10","obj":"OBT:002817"},{"id":"A9","pred":"NCBI_Taxonomy","subj":"T11","obj":"1280"},{"id":"A18","pred":"OntoBiotope","subj":"T19","obj":"OBT:002920"}],"text":"Detection of Staphylococcus aureus including MRSA on environmental surfaces in a jail setting.\nWe examined jail environmental surfaces to explore whether they might serve as reservoirs of viable methicillin-resistant Staphylococcus aureus (MRSA). We swabbed 132 surfaces, inoculated primary and secondary mannitol salts and oxacillin-resistant screening agar, and used API tests to identify S. aureus and E-tests to determine methicillin/oxacillin resistance. We recovered S. aureus from 10 (7.6%) surfaces; eight (6.1%) isolates were MRSA. We ran pulsed-field gel electrophoresis on six resistant isolates and observed three patterns, one of which was identical to that identified in a previous study of inmates' nasal specimens. Finding MRSA-contaminated surfaces on a variety of environmental surfaces in the absence of an overt outbreak emphasizes that correctional facilities should have protocols for environmental cleaning as a component of MRSA prevention.\n\n"}