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BB-kb@ldeleger:BB-kb-9535771 JSONTXT

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bionlp-ost-19-BB-kb-train

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue NCBI_Taxonomy OntoBiotope
T1 0-103 Title denotes Order of fusions between bacterial and mammalian proteins can determine solubility in Escherichia coli.
T3 39-48 Habitat denotes mammalian OBT:001625
T4 86-102 Microorganism denotes Escherichia coli 562
T2 104-1049 Paragraph denotes We made fusions between Escherichia coli maltose-binding protein (MBP) and the mammalian aspartic proteinases pepsinogen or procathepsin D. When MBP was at the N-terminus, the fusions were soluble in E. coli. When the order was reversed, the chimeric proteins formed inclusion bodies. The data suggest that the solubility of fusion proteins is controlled by whether the protein domains emerging first from the ribosome normally fold into soluble or insoluble states. The soluble MBP-aspartic proteinase fusions were stable but proteolytically inactive. MBP-pepsinogen, however, was efficiently renatured from 8 M urea in vitro, suggesting that the E. coli cytoplasm does not support folding of the mammalian partner protein to the native state. Thus, inclusion body formation may be the consequence, rather than the cause, of non-native folding in vivo, and in E. coli soluble proteins may fold into states different from those reached in vitro.
T5 128-144 Microorganism denotes Escherichia coli 562
T6 183-192 Habitat denotes mammalian OBT:001625
T7 304-311 Microorganism denotes E. coli 562
T8 752-759 Microorganism denotes E. coli 562
T9 802-811 Habitat denotes mammalian OBT:001625
T10 965-972 Microorganism denotes E. coli 562