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NameTDescription # Ann.AuthorMaintainerUpdated_atStatus

321-340 / 556 show all
2015-BEL-Sample An attempt to upload 295 BEL statements, i.e. the sample set used for the 2015 BioCreative challenge. 58Fabio RinaldiFabio Rinaldi2023-11-29Testing
FSU-PRGE A new broad-coverage corpus composed of 3,306 MEDLINE abstracts dealing with gene and protein mentions. The annotation process was semi-automatic. Publication: http://aclweb.org/anthology/W/W10/W10-1838.pdf59.5 KCALBC ProjectYue Wang2023-11-26Released
TEST-DiseaseOrPhenotypicFeature Annotated by Mesh_All_FN795Eisuke Dohi2023-11-29Released
CoGe_Citation_Annotations Annotated PMC abstracts+full articles, that cite the "CoGe" papers (PMID: 18952863, 18269575). Total Num Citations: 165 Total Num Unique Citations: 141 Total Num Abstracts: 165 Total Num Whole Articles: 165 0Heather Lenthclent2023-11-29Uploading
LitCovid-PMC-OGER-BB Annotating PMC articles with OGER and BioBert, according to an hand-crafted Covid-specific dictionary and the 10 different CRAFT ontologies (http://bionlp-corpora.sourceforge.net/CRAFT/): Chemical Entities of Biological Interest (CHEBI), Cell Ontology (CL), Entrez Gene (UBERON), Gene Ontology (biological process (GO-BP), cellular component (GO-CC), and molecular function (GO-MF), NCBI Taxonomy (NCBITaxon), Protein Ontology (PR), Sequence Ontology (SO)3.14 MFabio RinaldiNico Colic2023-11-24Developing
pubmed-enju-pas Annotating PubMed abstracts for predicate-argument structure (PAS). Enju 2.4.2 is used to automatically compute PAS.19.1 MEnjuJin-Dong Kim2023-11-24Developing
TEST-CellLine Annotation: AnnotationByCellosaurus76Yasunori Yamamoto2023-11-29Testing
GO-BP Annotation for biological processes as defined in the "Biological Process" subset of Gene Ontology35.4 KDBCLSJin-Dong Kim2023-11-29Developing
GO-CC Annotation for cellular components as defined in the "Cellular Component" subtree of Gene Ontology17.6 KDBCLSJin-Dong Kim2023-11-30Developing
ICD10 Annotation for disease names as defined in ICD101.6 KDBCLSJin-Dong Kim2023-11-29Developing
mondo_disease annotation for diseases and disorders as defined in MONDO. Automatic annotation by PD-MONDO.256 KJin-Dong Kim2023-11-28Developing
EDAM-DFO annotation for EDAM terms for data, formats, and operations12.5 KJin-Dong Kim2023-11-29Testing
EDAM-topics annotation for EDAM topics11.6 KJin-Dong Kim2023-11-29Testing
GlycoGenes annotation for glyco-genes based on GGDB1.01 KJin-Dong Kim2023-11-29Developing
GO-MF Annotation for molecular functions as defined in the "Molecular Function" subtree of Gene Ontology19.7 KDBCLSJin-Dong Kim2023-12-04Testing
NCBITAXON annotation for NCBI taxonomy. Automatic annotation by PD-NCBITaxon.502 KJin-Dong Kim2023-11-24Developing
BioMedLAT Annotation of 643 questions from BioASQ with the Lexical Answer Type (LAT) and headword.02016-09-23Developing
dailymed_spl Annotation of indications from DailyMed structured product labels0micheldumontier2023-11-29Developing
IMDB-NLP Annotations for chunking and semantic role labeling based on in-memory databases.02016-05-06Uploading
ENG_NER_NEL Annotations in COVID-19 related PubMed abstracts from the following ontologies: Disease Ontology ("do"), Gene Ontology ("go"), Human Phenotype Ontology ("hpo"), ChEBI ontology ("chebi"), MeSH 493LASIGE-DeSTpruas_182023-11-26Developing
NameT# Ann.AuthorMaintainerUpdated_atStatus

321-340 / 556 show all
2015-BEL-Sample 58Fabio RinaldiFabio Rinaldi2023-11-29Testing
FSU-PRGE 59.5 KCALBC ProjectYue Wang2023-11-26Released
TEST-DiseaseOrPhenotypicFeature 795Eisuke Dohi2023-11-29Released
CoGe_Citation_Annotations 0Heather Lenthclent2023-11-29Uploading
LitCovid-PMC-OGER-BB 3.14 MFabio RinaldiNico Colic2023-11-24Developing
pubmed-enju-pas 19.1 MEnjuJin-Dong Kim2023-11-24Developing
TEST-CellLine 76Yasunori Yamamoto2023-11-29Testing
GO-BP 35.4 KDBCLSJin-Dong Kim2023-11-29Developing
GO-CC 17.6 KDBCLSJin-Dong Kim2023-11-30Developing
ICD10 1.6 KDBCLSJin-Dong Kim2023-11-29Developing
mondo_disease 256 KJin-Dong Kim2023-11-28Developing
EDAM-DFO 12.5 KJin-Dong Kim2023-11-29Testing
EDAM-topics 11.6 KJin-Dong Kim2023-11-29Testing
GlycoGenes 1.01 KJin-Dong Kim2023-11-29Developing
GO-MF 19.7 KDBCLSJin-Dong Kim2023-12-04Testing
NCBITAXON 502 KJin-Dong Kim2023-11-24Developing
BioMedLAT 02016-09-23Developing
dailymed_spl 0micheldumontier2023-11-29Developing
IMDB-NLP 02016-05-06Uploading
ENG_NER_NEL 493LASIGE-DeSTpruas_182023-11-26Developing