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NameTDescription# Ann. AuthorMaintainerUpdated_atStatus

501-520 / 556 show all
DisGeNET5_variant_disease The file contains variant-disease associations obtained by text mining MEDLINE abstracts using the BeFree system, including the variant and disease off sets. 144 KIBI GroupYue Wang2023-11-24Released
PubTator4TogoVar 198 KPubTatorYasunori Yamamoto2024-01-10Developing
pmc-enju-pas Predicate-argument structure annotation produced by Enju. This data set is initially produced as a supporting resource for BioNLP-ST 2016 GE task. As so, it currently includes the 34 full paper articles that are in the benchmark data sets of GE 2016 task, reference data set (bionlp-st-ge-2016-reference) and test data set (bionlp-st-ge-2016-test), but will be extended to include more papers from the PubMed Central Open Access subset (PMCOA). 205 KDBCLSJin-Dong Kim2023-11-28Developing
OryzaGP_2021_v2 OryzaGP_2021_v2 will use a second annotator 208 Klarmande2023-11-29Developing
bionlp-st-ge-2016-spacy-parsed Dependency parses produced by spaCy parser, and part-of-speech tags produced by Stanford tagger (with the wsj-0-18-left3words-nodistsim model). The exact procedure is described here. Data set contains the 34 full paper articles used in the BioNLP 2016 GE task. 225 KNico ColicNico Colic2023-11-29Released
mondo_disease annotation for diseases and disorders as defined in MONDO. Automatic annotation by PD-MONDO.256 KJin-Dong Kim2023-11-28Developing
Glycosmos6-MAT Automatic annotation by PD-MAT.263 KJin-Dong Kim2023-11-29Developing
GoldHamster 285 Kzebet2023-11-29Beta
LitCovid-OGER-BB Using OGER (www.ontogene.com) and Biobert to obtain annotations for 10 different vocabularies.308 KFabio RinaldiNico Colic2023-11-28Released
21k_plant_trait_mention 333 Kxzyao2023-11-29Testing
LitCovid-PD-GO-BP Terms for biological prosesses, as defined in GO374 KJin-Dong Kim2023-11-29Developing
OryzaGP_2021_FLAIR 386 Klarmande2023-11-29Developing
GlyTouCan-IUPAC 399 Kkiyoko2023-11-29Testing
LitCovid-TimeML 426 KJin-Dong Kim2023-11-29Developing
Oryza-OGER 462 Kfabiorinaldi2023-11-29
performance-test a project for performance test480 KJin-Dong Kim2023-11-27Testing
craft-sa-dev Development data for CRAFT SA shared task. This project contains the development (training) annotations for the Structural Annotation task of the CRAFT Shared Task 2019. This particular set contains token and sentence annotations with tokens linked via dependency relations. These dependency relations were automatically generated using the manually curated CRAFT constituency treebank files as input.490 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-27Released
NCBITAXON annotation for NCBI taxonomy. Automatic annotation by PD-NCBITaxon.502 KJin-Dong Kim2023-11-24Developing
LitCovid-PD-UBERON 540 KJin-Dong Kim2023-11-29
pqqtest_sentence 565 Kyaoxinzhi2023-11-29Testing
NameT# Ann. AuthorMaintainerUpdated_atStatus

501-520 / 556 show all
DisGeNET5_variant_disease 144 KIBI GroupYue Wang2023-11-24Released
PubTator4TogoVar 198 KPubTatorYasunori Yamamoto2024-01-10Developing
pmc-enju-pas 205 KDBCLSJin-Dong Kim2023-11-28Developing
OryzaGP_2021_v2 208 Klarmande2023-11-29Developing
bionlp-st-ge-2016-spacy-parsed 225 KNico ColicNico Colic2023-11-29Released
mondo_disease 256 KJin-Dong Kim2023-11-28Developing
Glycosmos6-MAT 263 KJin-Dong Kim2023-11-29Developing
GoldHamster 285 Kzebet2023-11-29Beta
LitCovid-OGER-BB 308 KFabio RinaldiNico Colic2023-11-28Released
21k_plant_trait_mention 333 Kxzyao2023-11-29Testing
LitCovid-PD-GO-BP 374 KJin-Dong Kim2023-11-29Developing
OryzaGP_2021_FLAIR 386 Klarmande2023-11-29Developing
GlyTouCan-IUPAC 399 Kkiyoko2023-11-29Testing
LitCovid-TimeML 426 KJin-Dong Kim2023-11-29Developing
Oryza-OGER 462 Kfabiorinaldi2023-11-29
performance-test 480 KJin-Dong Kim2023-11-27Testing
craft-sa-dev 490 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-27Released
NCBITAXON 502 KJin-Dong Kim2023-11-24Developing
LitCovid-PD-UBERON 540 KJin-Dong Kim2023-11-29
pqqtest_sentence 565 Kyaoxinzhi2023-11-29Testing