| OryzaGP_2021 | | Updating OryzaGP | 1.08 M | Pierre Larmande | larmande | 2023-11-28 | Developing | |
| OryzaGP | | A dataset for Named Entity Recognition for rice gene | 29.1 K | Huy Do and Pierre Larmande | Yue Wang | 2023-11-24 | Uploading | |
| oger-json-test | | Test corpus for testing OGER web service | 97.6 K | | Nico Colic | 2023-11-29 | Testing | |
| NGLY1-deficiency | | A collection of PubMed abstracts that may be related to NGLY1 deficiency. | 60.5 K | | Jin-Dong Kim | 2023-11-29 | Developing | |
| NEUROSES | | This corpus is composed of PubMed articles containing cognitive enhancers and anti-depressants drug mentions. The selected sentences are automatically annotated using the NCBO Annotator with the Chemical Entities of Biological Interest (CHEBI) and Phenotypic Quality Ontology (PATO) ontologies, we also produced annotations using PhenoMiner ontology via a dictionary-based tagger. | 2.14 M | | nestoralvaro | 2023-11-24 | Beta | |
| NCBITAXON | | annotation for NCBI taxonomy.
Automatic annotation by PD-NCBITaxon. | 502 K | | Jin-Dong Kim | 2023-11-24 | Developing | |
| MyTest | | | 9.81 M | | Jin-Dong Kim | 2023-11-24 | Testing | |
| mondo_disease | | annotation for diseases and disorders as defined in MONDO.
Automatic annotation by PD-MONDO. | 256 K | | Jin-Dong Kim | 2023-11-28 | Developing | |
| Molecular_Biology | | | 0 | | Sophie Nam | 2023-11-29 | | |
| MENA-example2 | | | 3 | | Jin-Dong Kim | 2023-11-24 | Testing | |
| MENA-example | | | 5 | | Jin-Dong Kim | 2023-11-29 | | |
| LitEisuke | | | 6.12 K | | Eisuke Dohi | 2023-11-29 | Developing | |
| LitCovid-TimeML | | | 426 K | | Jin-Dong Kim | 2023-11-29 | Developing | |
| LitCovid-sentences-v1 | | Sentence segmentation of all the texts in the LitCovid literature. The segmentation is automatically obtained using the TextSentencer annotation service developed and maintained by DBCLS. | 16.5 K | | Jin-Dong Kim | 2023-11-27 | Released | |
| LitCovid-sentences | | | 5.63 M | | Jin-Dong Kim | 2023-11-24 | Developing | |
| LitCovid-sample-UniProt | | | 1.25 K | | Jin-Dong Kim | 2023-11-30 | Testing | |
| LitCovid-sample-sentences | | | 2.3 K | | Jin-Dong Kim | 2023-11-29 | Beta | |
| LitCovid-sample-Pubtator | | | 3.86 K | | Jin-Dong Kim | 2023-11-28 | Uploading | |
| LitCovid-sample-PD-UBERON | | PubDictionaries annotation for UBERON terms - updated at 2020-04-30
It is annotation for anatomical entities based on Uberon.
The terms in Uberon are uploaded in PubDictionaries
(Uberon),
with which the annotations in this project are produced.
The parameter configuration used for this project is
here.
Note that it is an automatically generated dictionary-based annotation.
It will be updated periodically, as the documents are increased, and the dictionary is improved.
| 310 | | Jin-Dong Kim | 2023-11-28 | Beta | |
| LitCovid-sample-PD-NCBITaxon | | | 1.35 K | | Jin-Dong Kim | 2023-11-29 | Beta | |
