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NameTDescription # Ann.AuthorMaintainerUpdated_atStatus

201-220 / 316 show all
ASCO_abstracts asco abstracts sample dataset28 Kalo332023-11-29Testing
SCAI-Test A small corpus for the evaluation of dictionaries containing chemical entities. Publication: http://www.scai.fraunhofer.de/fileadmin/images/bio/data_mining/paper/kolarik2008.pdf Original source: https://www.scai.fraunhofer.de/en/business-research-areas/bioinformatics/downloads/corpora-for-chemical-entity-recognition.html1.21 KCALBC ProjectYue Wang2023-11-28Released
JF-test A test corpus for exploring this service9Johan Fridjohanf2023-12-03Testing
blah6_medical_device BLAH6 hackathon project to annotate medical device indications in premarket approval statement summaries. The documents in this project serve as a corpus of premarket approval (PMA) statements that have undergone quality control. In particular, we have (1) removed non-ascii characters, (2) fixed some text segmentation errors, and (3) fixed some capitalization errors.0Stefano Rensitherightstef2023-11-29Beta
CellFinder CellFinder corpus4.75 KMariana Neves, Alexander Damaschun, Andreas Kurtz, Ulf LeserMariana Neves2023-11-27Released
Colil Colil (Comments on Literature in Literature) is a search service for citation contexts utilized in the biomedical domain. Colil searches for a cited paper in the Colil database and then returns a list of the citation contexts for it and its relevant papers based on co-citations.3.34 KDBCLSToyofumi Fujiwara2023-11-28Testing
genia-medco-coref Coreference annotation made to the Genia corpus, following the MUC annotation scheme. It is a product of the collaboration between the Genia and the MedCo projects.45.9 KMedCo project & Genia projectJin-Dong Kim2023-11-24Developing
CyanoBase Cyanobacteria are prokaryotic organisms that have served as important model organisms for studying oxygenic photosynthesis and have played a significant role in the Earthfs history as primary producers of atmospheric oxygen. Publication: http://www.aclweb.org/anthology/W12-24301.1 KKazusa DNA Research Institute and Database Center for Life Science (DBCLS)Yue Wang2023-11-26Released
tagtog-demo demo documents produced by tagtog annotations262tagtog2023-11-27Developing
craft-ca-core-ex-dev Development data for CRAFT CA shared task, core concepts + EXTENSIONS. This project contains the development (training) annotations for the Concept Annotation task of the CRAFT Shared Task 2019. This particular set of concept annotations is the "core+extensions" set. See the task description for details, but this set contains annotations to concepts that appear in the original 10 Open Biomedical Ontologies used for annotation PLUS annotations to extension classes created using the core concepts.90.2 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-29Released
craft-ca-core-dev Development data for CRAFT CA shared task, core concepts only. This project contains the development (training) annotations for the Concept Annotation task of the CRAFT Shared Task 2019. This particular set of concept annotations is the "core" set. See the task description for details, but this set contains only annotations to concepts that appear in the original 10 Open Biomedical Ontologies used for annotation. (That is to say, it does not contain any annotations to extension classes).59.8 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-29Released
blah6 device Annotator374slee72682023-11-28Testing
LitCovid-ArguminSci Discourse elements for the documents in the LitCovid dataset. Annotations were automatically predicted by the ArguminSci tool (https://github.com/anlausch/ArguminSci)4.9 Kzebet2023-11-27Released
PGDBj_disease_curation1 disease curation test348ichihara_hisakoichihara_hisako2023-12-03Testing
Nanbyo-330-20171127 Disease descriptions extracted from MHLW19.8 KToyofumi Fujiwara2023-11-26Testing
DLUT931 DLUT NLP Lab.Test our event extration result for 16 GE task.4.57 KDLUT9312023-11-30Testing
PMC-KEGG Documents from PMC including the word KEGG, with names of software tools and databases marked. 27yucca2023-11-28Developing
c_corpus Documents included in the c_corpus: https://github.com/SMAFIRA/c_corpus/blob/master/SMAFIRAc_0.4_Annotations.csv107 K2023-11-29Released
RDoCTask1SampleData Each annotation file contains an annotated abstract with an RDoC category. Each title span in these sample data is annotated with the corresponding related RDoC construct, although the RDoC category would apply for the entire abstract. The annotation data are formatted as json files. Please refer to the following page for a more detailed description of the json format http://www.pubannotation.org/docs/annotation-format/.20mmanani1s2023-11-29Released
RDoCTask2SampleData Each annotation file contains an annotated abstract with the most relevant sentence. The relevant sentence is annotated with the RDoC category name. The annotation data are formatted as json files. Please refer to the following page for a more detailed description of the json format http://www.pubannotation.org/docs/annotation-format/. 10mmanani1s2023-11-29Released
NameT# Ann.AuthorMaintainerUpdated_atStatus

201-220 / 316 show all
ASCO_abstracts 28 Kalo332023-11-29Testing
SCAI-Test 1.21 KCALBC ProjectYue Wang2023-11-28Released
JF-test 9Johan Fridjohanf2023-12-03Testing
blah6_medical_device 0Stefano Rensitherightstef2023-11-29Beta
CellFinder 4.75 KMariana Neves, Alexander Damaschun, Andreas Kurtz, Ulf LeserMariana Neves2023-11-27Released
Colil 3.34 KDBCLSToyofumi Fujiwara2023-11-28Testing
genia-medco-coref 45.9 KMedCo project & Genia projectJin-Dong Kim2023-11-24Developing
CyanoBase 1.1 KKazusa DNA Research Institute and Database Center for Life Science (DBCLS)Yue Wang2023-11-26Released
tagtog-demo 262tagtog2023-11-27Developing
craft-ca-core-ex-dev 90.2 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-29Released
craft-ca-core-dev 59.8 KUniversity of Colorado Anschutz Medical Campuscraft-st2023-11-29Released
blah6 374slee72682023-11-28Testing
LitCovid-ArguminSci 4.9 Kzebet2023-11-27Released
PGDBj_disease_curation1 348ichihara_hisakoichihara_hisako2023-12-03Testing
Nanbyo-330-20171127 19.8 KToyofumi Fujiwara2023-11-26Testing
DLUT931 4.57 KDLUT9312023-11-30Testing
PMC-KEGG 27yucca2023-11-28Developing
c_corpus 107 K2023-11-29Released
RDoCTask1SampleData 20mmanani1s2023-11-29Released
RDoCTask2SampleData 10mmanani1s2023-11-29Released